RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 PHAXQ9H814 394 aaKnown RBP12.29□□□□□ -0.44
CPT1A-201ENST00000265641 NEBLO76041 1014 aa12.29□□□□□ -0.44
CPT1A-201ENST00000265641 GPR161Q8N6U8 529 aaKnown RBP12.29□□□□□ -0.44
CPT1A-201ENST00000265641 TTC14Q96N46 770 aa12.29□□□□□ -0.44
CPT1A-201ENST00000265641 CTNNA3Q9UI47 895 aa12.29□□□□□ -0.44
CPT1A-201ENST00000265641 DAAM2Q86T65 1068 aa12.29□□□□□ -0.44
CPT1A-201ENST00000265641 FSIP1Q8NA03 581 aa12.29□□□□□ -0.44
CPT1A-201ENST00000265641 ATRIPQ8WXE1 791 aa12.29□□□□□ -0.44
CPT1A-201ENST00000265641 VCXQ9H320 206 aa12.29□□□□□ -0.44
CPT1A-201ENST00000265641 NUP160Q12769 1436 aa12.29□□□□□ -0.44
CPT1A-201ENST00000265641 DNMT1P26358 1616 aaKnown RBP12.28□□□□□ -0.44
CPT1A-201ENST00000265641 F13A1P00488 732 aa12.28□□□□□ -0.44
CPT1A-201ENST00000265641 RIC3Q7Z5B4 369 aa12.28□□□□□ -0.44
CPT1A-201ENST00000265641 AMOTL1Q8IY63 956 aa12.28□□□□□ -0.44
CPT1A-201ENST00000265641 SCLT1Q96NL6 688 aa12.28□□□□□ -0.44
CPT1A-201ENST00000265641 MAATS1Q7Z4T9 603 aa12.28□□□□□ -0.44
CPT1A-201ENST00000265641 NPHP3Q7Z494 1330 aa12.28□□□□□ -0.44
CPT1A-201ENST00000265641 ATP2B1P20020 1258 aa12.28□□□□□ -0.44
CPT1A-201ENST00000265641 GJB2P29033 226 aa12.28□□□□□ -0.44
CPT1A-201ENST00000265641 FKBP15Q5T1M5 1219 aa12.28□□□□□ -0.44
CPT1A-201ENST00000265641 VEZTQ9HBM0 779 aa12.28□□□□□ -0.44
CPT1A-201ENST00000265641 JRKLQ9Y4A0 524 aa12.28□□□□□ -0.44
CPT1A-201ENST00000265641 RPGRIP1LQ68CZ1 1315 aa12.28□□□□□ -0.44
CPT1A-201ENST00000265641 GLRX3O76003 335 aaKnown RBP12.28□□□□□ -0.44
CPT1A-201ENST00000265641 PPP2R3AQ06190 1150 aa12.28□□□□□ -0.44
CPT1A-201ENST00000265641 ATL3Q6DD88 541 aa12.28□□□□□ -0.44
CPT1A-201ENST00000265641 TTC5Q8N0Z6 440 aa12.28□□□□□ -0.44
CPT1A-201ENST00000265641 LUC7L2Q9Y383 392 aaKnown RBP12.28□□□□□ -0.44
CPT1A-201ENST00000265641 LUC7L3O95232 432 aaKnown RBP12.27□□□□□ -0.44
CPT1A-201ENST00000265641 ZFYP08048 801 aaPredicted RBP12.27□□□□□ -0.44
CPT1A-201ENST00000265641 ELF2Q15723 593 aa12.27□□□□□ -0.44
CPT1A-201ENST00000265641 CCDC6Q16204 474 aa12.27□□□□□ -0.44
CPT1A-201ENST00000265641 SYT10Q6XYQ8 523 aa12.27□□□□□ -0.44
CPT1A-201ENST00000265641 HYPKQ9NX55 129 aa12.27□□□□□ -0.44
CPT1A-201ENST00000265641 FGFR1OPO95684 399 aaKnown RBP12.27□□□□□ -0.44
CPT1A-201ENST00000265641 ZNF853P0CG23 659 aa12.27□□□□□ -0.44
CPT1A-201ENST00000265641 RBM42Q9BTD8 480 aaKnown RBP12.27□□□□□ -0.44
CPT1A-201ENST00000265641 MYO1BO43795 1136 aa12.27□□□□□ -0.45
CPT1A-201ENST00000265641 RLBP1P12271 317 aa12.27□□□□□ -0.45
CPT1A-201ENST00000265641 UBASH3AP57075 661 aa12.27□□□□□ -0.45
CPT1A-201ENST00000265641 SPAG1Q07617 926 aa12.27□□□□□ -0.45
CPT1A-201ENST00000265641 OSCARQ8IYS5 282 aa12.27□□□□□ -0.45
CPT1A-201ENST00000265641 ARHGAP45Q92619 1136 aa12.27□□□□□ -0.45
CPT1A-201ENST00000265641 SYT1P21579 422 aa12.27□□□□□ -0.45
CPT1A-201ENST00000265641 HDGFL1Q5TGJ6 251 aa12.27□□□□□ -0.45
CPT1A-201ENST00000265641 KIF1BPQ96EK5 621 aa12.27□□□□□ -0.45
CPT1A-201ENST00000265641 ZFP91Q96JP5 570 aaPredicted RBP12.27□□□□□ -0.45
CPT1A-201ENST00000265641 GCC2Q8IWJ2 1684 aa12.27□□□□□ -0.45
CPT1A-201ENST00000265641 ARHGEF11O15085 1522 aa12.27□□□□□ -0.45
CPT1A-201ENST00000265641 A0A087WUV0 522 aaPredicted RBP12.26□□□□□ -0.45
CPT1A-201ENST00000265641 MCTP2Q6DN12 878 aa12.26□□□□□ -0.45
CPT1A-201ENST00000265641 DDX46Q7L014 1031 aaKnown RBP12.26□□□□□ -0.45
CPT1A-201ENST00000265641 ZKSCAN8Q15776 578 aaPredicted RBP12.26□□□□□ -0.45
CPT1A-201ENST00000265641 PRPF40BQ6NWY9 871 aaKnown RBP12.26□□□□□ -0.45
CPT1A-201ENST00000265641 MED4Q9NPJ6 270 aa12.26□□□□□ -0.45
CPT1A-201ENST00000265641 RRP15Q9Y3B9 282 aaKnown RBP12.26□□□□□ -0.45
CPT1A-201ENST00000265641 PTPRKQ15262 1439 aa12.26□□□□□ -0.45
CPT1A-201ENST00000265641 GCKP35557 465 aa12.26□□□□□ -0.45
CPT1A-201ENST00000265641 EID1Q9Y6B2 187 aa12.26□□□□□ -0.45
CPT1A-201ENST00000265641 NEDD9Q14511 834 aa12.26□□□□□ -0.45
CPT1A-201ENST00000265641 IFI16Q16666 785 aaKnown RBP12.26□□□□□ -0.45
CPT1A-201ENST00000265641 SPECC1Q5M775 1068 aa12.26□□□□□ -0.45
CPT1A-201ENST00000265641 CACNA2D4Q7Z3S7 1137 aa12.26□□□□□ -0.45
CPT1A-201ENST00000265641 CCDC155Q8N6L0 562 aa12.26□□□□□ -0.45
CPT1A-201ENST00000265641 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.26□□□□□ -0.45
CPT1A-201ENST00000265641 CYLC1P35663 651 aaPredicted RBP12.25□□□□□ -0.45
CPT1A-201ENST00000265641 SULT6B1Q6IMI4 303 aa12.25□□□□□ -0.45
CPT1A-201ENST00000265641 DISP1Q96F81 1524 aa12.25□□□□□ -0.45
CPT1A-201ENST00000265641 ATP11AP98196 1134 aa12.25□□□□□ -0.45
CPT1A-201ENST00000265641 CCDC57Q2TAC2 916 aa12.25□□□□□ -0.45
CPT1A-201ENST00000265641 PPFIBP2Q8ND30 876 aa12.25□□□□□ -0.45
CPT1A-201ENST00000265641 NUP88Q99567 741 aaPredicted RBP12.25□□□□□ -0.45
CPT1A-201ENST00000265641 BUB1BO60566 1050 aaPredicted RBP12.25□□□□□ -0.45
CPT1A-201ENST00000265641 TSNAXIP1Q2TAA8 658 aa12.25□□□□□ -0.45
CPT1A-201ENST00000265641 CCDC158Q5M9N0 1113 aa12.25□□□□□ -0.45
CPT1A-201ENST00000265641 HMG20BQ9P0W2 317 aa12.25□□□□□ -0.45
CPT1A-201ENST00000265641 NDUFAB1O14561 156 aa12.25□□□□□ -0.45
CPT1A-201ENST00000265641 PPFIA1Q13136 1202 aa12.25□□□□□ -0.45
CPT1A-201ENST00000265641 EXOC4Q96A65 974 aa12.25□□□□□ -0.45
CPT1A-201ENST00000265641 YY1AP1Q9H869 796 aa12.25□□□□□ -0.45
CPT1A-201ENST00000265641 LMBRD1Q9NUN5 540 aa12.25□□□□□ -0.45
CPT1A-201ENST00000265641 GBP1P32455 592 aa12.24□□□□□ -0.45
CPT1A-201ENST00000265641 ZNF75DP51815 510 aa12.24□□□□□ -0.45
CPT1A-201ENST00000265641 KRT83P78385 493 aa12.24□□□□□ -0.45
CPT1A-201ENST00000265641 AIMP1Q12904 312 aaKnown RBP12.24□□□□□ -0.45
CPT1A-201ENST00000265641 CROCCP2Q86T23 111 aa12.24□□□□□ -0.45
CPT1A-201ENST00000265641 AACSQ86V21 672 aa12.24□□□□□ -0.45
CPT1A-201ENST00000265641 VPS36Q86VN1 386 aa12.24□□□□□ -0.45
CPT1A-201ENST00000265641 TFIP11Q9UBB9 837 aaKnown RBP12.24□□□□□ -0.45
CPT1A-201ENST00000265641 DNAJC5BQ9UF47 199 aa12.24□□□□□ -0.45
CPT1A-201ENST00000265641 SAMD15Q9P1V8 674 aa12.24□□□□□ -0.45
CPT1A-201ENST00000265641 CNPY2Q9Y2B0 182 aa12.24□□□□□ -0.45
CPT1A-201ENST00000265641 RALGAPBQ86X10 1494 aa12.24□□□□□ -0.45
CPT1A-201ENST00000265641 EFCAB8A8MWE9 144 aa12.24□□□□□ -0.45
CPT1A-201ENST00000265641 SDSP20132 328 aa12.24□□□□□ -0.45
CPT1A-201ENST00000265641 CEP120Q8N960 986 aa12.24□□□□□ -0.45
CPT1A-201ENST00000265641 FAM71BQ8TC56 605 aa12.24□□□□□ -0.45
CPT1A-201ENST00000265641 KCNG4Q8TDN1 519 aa12.24□□□□□ -0.45
CPT1A-201ENST00000265641 TRIM7Q9C029 511 aa12.24□□□□□ -0.45
CPT1A-201ENST00000265641 FEZ2Q9UHY8 353 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms