RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 NUTM1Q86Y26 1132 aa11.87□□□□□ -0.51
LCN1-201ENST00000263598 RBM17Q96I25 401 aaKnown RBP11.87□□□□□ -0.51
LCN1-201ENST00000263598 WBP1LQ9NX94 342 aa11.87□□□□□ -0.51
LCN1-201ENST00000263598 ABT1Q9ULW3 272 aaKnown RBP11.87□□□□□ -0.51
LCN1-201ENST00000263598 GJA3Q9Y6H8 435 aa11.87□□□□□ -0.51
LCN1-201ENST00000263598 LBX1P52954 281 aa11.86□□□□□ -0.51
LCN1-201ENST00000263598 TMX4Q9H1E5 349 aaPredicted RBP11.86□□□□□ -0.51
LCN1-201ENST00000263598 RRP7AQ9Y3A4 280 aaKnown RBP11.86□□□□□ -0.51
LCN1-201ENST00000263598 ABCC12Q96J65 1359 aa11.86□□□□□ -0.51
LCN1-201ENST00000263598 WDR33Q9C0J8 1336 aaKnown RBP11.86□□□□□ -0.51
LCN1-201ENST00000263598 ADAMTSL1Q8N6G6 1762 aa11.85□□□□□ -0.51
LCN1-201ENST00000263598 IBTKQ9P2D0 1353 aaPredicted RBP11.85□□□□□ -0.51
LCN1-201ENST00000263598 MYL6BP14649 208 aa11.85□□□□□ -0.51
LCN1-201ENST00000263598 GPTP24298 496 aa11.85□□□□□ -0.51
LCN1-201ENST00000263598 HOXA10P31260 410 aaPredicted RBP11.85□□□□□ -0.51
LCN1-201ENST00000263598 LARGE2Q8N3Y3 721 aa11.85□□□□□ -0.51
LCN1-201ENST00000263598 DDX21Q9NR30 783 aaKnown RBP eCLIP11.85□□□□□ -0.51
LCN1-201ENST00000263598 RIC1Q4ADV7 1423 aa11.85□□□□□ -0.51
LCN1-201ENST00000263598 SNED1Q8TER0 1413 aa11.85□□□□□ -0.51
LCN1-201ENST00000263598 LAMB4A4D0S4 1761 aa11.84□□□□□ -0.51
LCN1-201ENST00000263598 PPEF1O14829 653 aaPredicted RBP11.84□□□□□ -0.51
LCN1-201ENST00000263598 EIF4A1P60842 406 aaKnown RBP11.84□□□□□ -0.51
LCN1-201ENST00000263598 SUSD4Q5VX71 490 aa11.84□□□□□ -0.51
LCN1-201ENST00000263598 TTLL7Q6ZT98 887 aa11.84□□□□□ -0.51
LCN1-201ENST00000263598 USP50Q70EL3 339 aaPredicted RBP11.84□□□□□ -0.51
LCN1-201ENST00000263598 PPP1R42Q7Z4L9 355 aa11.84□□□□□ -0.51
LCN1-201ENST00000263598 NIM1KQ8IY84 436 aa11.84□□□□□ -0.51
LCN1-201ENST00000263598 CRAMP1Q96RY5 1269 aa11.84□□□□□ -0.51
LCN1-201ENST00000263598 ZBTB3Q9H5J0 574 aa11.84□□□□□ -0.51
LCN1-201ENST00000263598 ECE1P42892 770 aa11.83□□□□□ -0.52
LCN1-201ENST00000263598 SCNN1DP51172 638 aa11.83□□□□□ -0.52
LCN1-201ENST00000263598 PAXIP1Q6ZW49 1069 aaPredicted RBP11.83□□□□□ -0.52
LCN1-201ENST00000263598 BEGAINQ9BUH8 593 aa11.83□□□□□ -0.52
LCN1-201ENST00000263598 VPS33BQ9H267 617 aa11.83□□□□□ -0.52
LCN1-201ENST00000263598 PNNQ9H307 717 aaKnown RBP11.83□□□□□ -0.52
LCN1-201ENST00000263598 ERBB4Q15303 1308 aa11.83□□□□□ -0.52
LCN1-201ENST00000263598 UBN2Q6ZU65 1347 aa11.83□□□□□ -0.52
LCN1-201ENST00000263598 TCERG1O14776 1098 aaKnown RBP11.82□□□□□ -0.52
LCN1-201ENST00000263598 PPIP5K2O43314 1243 aa11.82□□□□□ -0.52
LCN1-201ENST00000263598 HSPA8P11142 646 aaKnown RBP11.82□□□□□ -0.52
LCN1-201ENST00000263598 EPS15P42566 896 aa11.82□□□□□ -0.52
LCN1-201ENST00000263598 PARP10Q53GL7 1025 aa11.82□□□□□ -0.52
LCN1-201ENST00000263598 GIGYF2Q6Y7W6 1299 aaKnown RBP11.82□□□□□ -0.52
LCN1-201ENST00000263598 ZNF34Q8IZ26 560 aa11.82□□□□□ -0.52
LCN1-201ENST00000263598 NLRP3Q96P20 1036 aa11.82□□□□□ -0.52
LCN1-201ENST00000263598 NTSR2O95665 410 aa11.81□□□□□ -0.52
LCN1-201ENST00000263598 NFE2L2Q16236 605 aa11.81□□□□□ -0.52
LCN1-201ENST00000263598 SUPT20HQ8NEM7 779 aa11.81□□□□□ -0.52
LCN1-201ENST00000263598 CAPNS2Q96L46 248 aa11.81□□□□□ -0.52
LCN1-201ENST00000263598 ATP6V0A2Q9Y487 856 aa11.81□□□□□ -0.52
LCN1-201ENST00000263598 MAPK8IP3Q9UPT6 1336 aa11.81□□□□□ -0.52
LCN1-201ENST00000263598 COL4A5P29400 1685 aa11.81□□□□□ -0.52
LCN1-201ENST00000263598 KDM3BQ7LBC6 1761 aa11.8□□□□□ -0.52
LCN1-201ENST00000263598 GRM1Q13255 1194 aa11.8□□□□□ -0.52
LCN1-201ENST00000263598 AOC3Q16853 763 aa11.8□□□□□ -0.52
LCN1-201ENST00000263598 GPR101Q96P66 508 aaPredicted RBP11.8□□□□□ -0.52
LCN1-201ENST00000263598 PLEKHF1Q96S99 279 aa11.8□□□□□ -0.52
LCN1-201ENST00000263598 THUMPD2Q9BTF0 503 aaKnown RBP11.8□□□□□ -0.52
LCN1-201ENST00000263598 UTP14AQ9BVJ6 771 aaKnown RBP11.8□□□□□ -0.52
LCN1-201ENST00000263598 ADARB2Q9NS39 739 aaKnown RBP11.8□□□□□ -0.52
LCN1-201ENST00000263598 NUP98P52948 1817 aa11.79□□□□□ -0.52
LCN1-201ENST00000263598 SLC10A5Q5PT55 438 aa11.79□□□□□ -0.52
LCN1-201ENST00000263598 CYP4F22Q6NT55 531 aa11.79□□□□□ -0.52
LCN1-201ENST00000263598 ABHD8Q96I13 439 aa11.79□□□□□ -0.52
LCN1-201ENST00000263598 GPRC5DQ9NZD1 345 aa11.79□□□□□ -0.52
LCN1-201ENST00000263598 TSPYL4Q9UJ04 414 aa11.79□□□□□ -0.52
LCN1-201ENST00000263598 ZNRF3Q9ULT6 936 aa11.79□□□□□ -0.52
LCN1-201ENST00000263598 TLL2Q9Y6L7 1015 aa11.79□□□□□ -0.52
LCN1-201ENST00000263598 LTBP1Q14766 1721 aa11.79□□□□□ -0.52
LCN1-201ENST00000263598 TRAF5O00463 557 aa11.78□□□□□ -0.52
LCN1-201ENST00000263598 BBOX1O75936 387 aa11.78□□□□□ -0.52
LCN1-201ENST00000263598 FMR1Q06787 632 aaKnown RBP eCLIP11.78□□□□□ -0.52
LCN1-201ENST00000263598 CST9Q5W186 159 aa11.78□□□□□ -0.52
LCN1-201ENST00000263598 DPP8Q6V1X1 898 aaPredicted RBP11.78□□□□□ -0.52
LCN1-201ENST00000263598 C3orf67Q6ZVT6 689 aa11.78□□□□□ -0.52
LCN1-201ENST00000263598 RTFDC1Q9BY42 306 aaPredicted RBP11.78□□□□□ -0.52
LCN1-201ENST00000263598 EIF2S2P20042 333 aaKnown RBP11.77□□□□□ -0.53
LCN1-201ENST00000263598 MAP2K2P36507 400 aa11.77□□□□□ -0.53
LCN1-201ENST00000263598 GMPSP49915 693 aaPredicted RBP11.77□□□□□ -0.53
LCN1-201ENST00000263598 CXCL9Q07325 125 aa11.77□□□□□ -0.53
LCN1-201ENST00000263598 HSP90AB3PQ58FF7 597 aa11.77□□□□□ -0.53
LCN1-201ENST00000263598 SLC51AQ86UW1 340 aa11.77□□□□□ -0.53
LCN1-201ENST00000263598 SP8Q8IXZ3 490 aa11.77□□□□□ -0.53
LCN1-201ENST00000263598 ABCC4O15439 1325 aa11.77□□□□□ -0.53
LCN1-201ENST00000263598 CDHR2Q9BYE9 1310 aa11.77□□□□□ -0.53
LCN1-201ENST00000263598 THSD7BQ9C0I4 1608 aa11.76□□□□□ -0.53
LCN1-201ENST00000263598 CA12O43570 354 aa11.76□□□□□ -0.53
LCN1-201ENST00000263598 CELF2O95319 508 aaKnown RBP11.76□□□□□ -0.53
LCN1-201ENST00000263598 TNIP1Q15025 636 aa11.76□□□□□ -0.53
LCN1-201ENST00000263598 PDIA6Q15084 440 aa11.76□□□□□ -0.53
LCN1-201ENST00000263598 CIAPIN1Q6FI81 312 aa11.76□□□□□ -0.53
LCN1-201ENST00000263598 DDX46Q7L014 1031 aaKnown RBP11.76□□□□□ -0.53
LCN1-201ENST00000263598 SAPCD2Q86UD0 394 aa11.76□□□□□ -0.53
LCN1-201ENST00000263598 MPNDQ8N594 471 aa11.76□□□□□ -0.53
LCN1-201ENST00000263598 BCL2L13Q9BXK5 485 aa11.76□□□□□ -0.53
LCN1-201ENST00000263598 BABAM1Q9NWV8 329 aa11.76□□□□□ -0.53
LCN1-201ENST00000263598 DLG5Q8TDM6 1919 aa11.76□□□□□ -0.53
LCN1-201ENST00000263598 RIPK4P57078 832 aa11.75□□□□□ -0.53
LCN1-201ENST00000263598 LMOD3Q0VAK6 560 aa11.75□□□□□ -0.53
LCN1-201ENST00000263598 KIAA2012Q0VF49 1180 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms