RNA–Protein interactions for RNA: ENST00000262460.4

GINS1-201, Transcript of GINS complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GINS1, Length 3,249 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-201ENST00000262460 CDC37L1Q7L3B6 337 aa10.42□□□□□ -0.74
GINS1-201ENST00000262460 ZSCAN30Q86W11 494 aa10.42□□□□□ -0.74
GINS1-201ENST00000262460 SPC24Q8NBT2 197 aa10.42□□□□□ -0.74
GINS1-201ENST00000262460 LIMCH1Q9UPQ0 1083 aa10.42□□□□□ -0.74
GINS1-201ENST00000262460 RAPGEF4Q8WZA2 1011 aa10.42□□□□□ -0.74
GINS1-201ENST00000262460 NEUROD6Q96NK8 337 aa10.42□□□□□ -0.74
GINS1-201ENST00000262460 PPP1R9BQ96SB3 815 aa10.42□□□□□ -0.74
GINS1-201ENST00000262460 LTN1O94822 1766 aa10.41□□□□□ -0.74
GINS1-201ENST00000262460 TIMM10P62072 90 aa10.41□□□□□ -0.74
GINS1-201ENST00000262460 CREB3L3Q68CJ9 461 aa10.41□□□□□ -0.74
GINS1-201ENST00000262460 CKAP2LQ8IYA6 745 aa10.41□□□□□ -0.74
GINS1-201ENST00000262460 DBNDD2Q9BQY9 259 aa10.41□□□□□ -0.74
GINS1-201ENST00000262460 ZBTB3Q9H5J0 574 aa10.41□□□□□ -0.74
GINS1-201ENST00000262460 KAT6BQ8WYB5 2073 aa10.41□□□□□ -0.74
GINS1-201ENST00000262460 ZSCAN22P10073 491 aaPredicted RBP10.41□□□□□ -0.74
GINS1-201ENST00000262460 ERCC4Q92889 916 aaPredicted RBP10.41□□□□□ -0.74
GINS1-201ENST00000262460 FTOQ9C0B1 505 aaKnown RBP eCLIP10.41□□□□□ -0.74
GINS1-201ENST00000262460 TSPY26PQ9H489 355 aa10.41□□□□□ -0.74
GINS1-201ENST00000262460 MARF1Q9Y4F3 1742 aaKnown RBP10.41□□□□□ -0.74
GINS1-201ENST00000262460 SNRKQ9NRH2 765 aa10.41□□□□□ -0.74
GINS1-201ENST00000262460 ARHGAP23Q9P227 1491 aa10.4□□□□□ -0.74
GINS1-201ENST00000262460 CYP27B1O15528 508 aa10.4□□□□□ -0.74
GINS1-201ENST00000262460 AP5Z1O43299 807 aa10.4□□□□□ -0.74
GINS1-201ENST00000262460 A1BGP04217 495 aa10.4□□□□□ -0.74
GINS1-201ENST00000262460 VPS53Q5VIR6 699 aa10.4□□□□□ -0.74
GINS1-201ENST00000262460 KCNH5Q8NCM2 988 aa10.4□□□□□ -0.74
GINS1-201ENST00000262460 DNAJC5Q9H3Z4 198 aa10.4□□□□□ -0.74
GINS1-201ENST00000262460 DBNLQ9UJU6 430 aaKnown RBP10.4□□□□□ -0.74
GINS1-201ENST00000262460 A0A0G2JS52 829 aa10.4□□□□□ -0.74
GINS1-201ENST00000262460 NEURL1BA8MQ27 555 aa10.4□□□□□ -0.74
GINS1-201ENST00000262460 GUCY1B3Q02153 619 aa10.4□□□□□ -0.74
GINS1-201ENST00000262460 TTLL7Q6ZT98 887 aa10.4□□□□□ -0.74
GINS1-201ENST00000262460 FAM13BQ9NYF5 915 aa10.4□□□□□ -0.74
GINS1-201ENST00000262460 A0A087WZG4 1122 aa10.39□□□□□ -0.75
GINS1-201ENST00000262460 SLC27A2O14975 620 aa10.39□□□□□ -0.75
GINS1-201ENST00000262460 F13A1P00488 732 aa10.39□□□□□ -0.75
GINS1-201ENST00000262460 ANAPC15P60006 121 aa10.39□□□□□ -0.75
GINS1-201ENST00000262460 SYNE4Q8N205 404 aa10.39□□□□□ -0.75
GINS1-201ENST00000262460 CYP46A1Q9Y6A2 500 aa10.39□□□□□ -0.75
GINS1-201ENST00000262460 CCDC171Q6TFL3 1326 aa10.39□□□□□ -0.75
GINS1-201ENST00000262460 WDR33Q9C0J8 1336 aaKnown RBP10.39□□□□□ -0.75
GINS1-201ENST00000262460 GCKRQ14397 625 aa10.39□□□□□ -0.75
GINS1-201ENST00000262460 LINS1Q8NG48 757 aa10.39□□□□□ -0.75
GINS1-201ENST00000262460 MTMR6Q9Y217 621 aa10.39□□□□□ -0.75
GINS1-201ENST00000262460 COL15A1P39059 1388 aa10.39□□□□□ -0.75
GINS1-201ENST00000262460 LARP1BQ659C4 914 aaKnown RBP10.39□□□□□ -0.75
GINS1-201ENST00000262460 LARP1Q6PKG0 1096 aaKnown RBP10.39□□□□□ -0.75
GINS1-201ENST00000262460 GPHNQ9NQX3 736 aaPredicted RBP10.39□□□□□ -0.75
GINS1-201ENST00000262460 DDX21Q9NR30 783 aaKnown RBP eCLIP10.39□□□□□ -0.75
GINS1-201ENST00000262460 ERBB3P21860 1342 aa10.39□□□□□ -0.75
GINS1-201ENST00000262460 SLIT1O75093 1534 aa10.39□□□□□ -0.75
GINS1-201ENST00000262460 LIG1P18858 919 aa10.38□□□□□ -0.75
GINS1-201ENST00000262460 CCT2P78371 535 aaKnown RBP10.38□□□□□ -0.75
GINS1-201ENST00000262460 NECTIN1Q15223 517 aa10.38□□□□□ -0.75
GINS1-201ENST00000262460 LMBR1LQ6UX01 489 aa10.38□□□□□ -0.75
GINS1-201ENST00000262460 ANKRD13DQ6ZTN6 518 aa10.38□□□□□ -0.75
GINS1-201ENST00000262460 STRN4Q9NRL3 753 aa10.38□□□□□ -0.75
GINS1-201ENST00000262460 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.38□□□□□ -0.75
GINS1-201ENST00000262460 PTMSP20962 102 aa10.38□□□□□ -0.75
GINS1-201ENST00000262460 MCM2P49736 904 aa10.38□□□□□ -0.75
GINS1-201ENST00000262460 NCOA5Q9HCD5 579 aaKnown RBP10.38□□□□□ -0.75
GINS1-201ENST00000262460 SRCAPQ6ZRS2 3230 aa10.38□□□□□ -0.75
GINS1-201ENST00000262460 HSP90B1P14625 803 aaKnown RBP10.37□□□□□ -0.75
GINS1-201ENST00000262460 TTC5Q8N0Z6 440 aa10.37□□□□□ -0.75
GINS1-201ENST00000262460 INTS4Q96HW7 963 aaKnown RBP10.37□□□□□ -0.75
GINS1-201ENST00000262460 PUS3Q9BZE2 481 aaKnown RBP10.37□□□□□ -0.75
GINS1-201ENST00000262460 SLC52A2Q9HAB3 445 aa10.37□□□□□ -0.75
GINS1-201ENST00000262460 FER1L4A9Z1Z3 1794 aa10.37□□□□□ -0.75
GINS1-201ENST00000262460 GOLIM4O00461 696 aa10.37□□□□□ -0.75
GINS1-201ENST00000262460 PHKG2P15735 406 aa10.37□□□□□ -0.75
GINS1-201ENST00000262460 AMOTQ4VCS5 1084 aa10.37□□□□□ -0.75
GINS1-201ENST00000262460 LRRC24Q50LG9 513 aa10.37□□□□□ -0.75
GINS1-201ENST00000262460 DNTTIP2Q5QJE6 756 aaKnown RBP10.37□□□□□ -0.75
GINS1-201ENST00000262460 TTLL5Q6EMB2 1281 aa10.37□□□□□ -0.75
GINS1-201ENST00000262460 PI16Q6UXB8 463 aa10.37□□□□□ -0.75
GINS1-201ENST00000262460 TTC6Q86TZ1 520 aa10.37□□□□□ -0.75
GINS1-201ENST00000262460 NFAT5O94916 1531 aa10.37□□□□□ -0.75
GINS1-201ENST00000262460 NPHP3Q7Z494 1330 aa10.37□□□□□ -0.75
GINS1-201ENST00000262460 ADCY5O95622 1261 aa10.37□□□□□ -0.75
GINS1-201ENST00000262460 ZKSCAN1P17029 563 aaPredicted RBP10.37□□□□□ -0.75
GINS1-201ENST00000262460 HAND2P61296 217 aa10.37□□□□□ -0.75
GINS1-201ENST00000262460 NEXNQ0ZGT2 675 aa10.37□□□□□ -0.75
GINS1-201ENST00000262460 HSP90AA2PQ14568 343 aaPredicted RBP10.37□□□□□ -0.75
GINS1-201ENST00000262460 EVI5LQ96CN4 794 aa10.37□□□□□ -0.75
GINS1-201ENST00000262460 ISY1Q9ULR0 285 aaKnown RBP10.37□□□□□ -0.75
GINS1-201ENST00000262460 MBD3O95983 291 aa10.36□□□□□ -0.75
GINS1-201ENST00000262460 GJB4Q9NTQ9 266 aa10.36□□□□□ -0.75
GINS1-201ENST00000262460 CABP4P57796 275 aa10.36□□□□□ -0.75
GINS1-201ENST00000262460 FGD1P98174 961 aa10.36□□□□□ -0.75
GINS1-201ENST00000262460 PTPN12Q05209 780 aaKnown RBP10.36□□□□□ -0.75
GINS1-201ENST00000262460 TOB2Q14106 344 aaPredicted RBP10.36□□□□□ -0.75
GINS1-201ENST00000262460 OTUD7BQ6GQQ9 843 aa10.36□□□□□ -0.75
GINS1-201ENST00000262460 GPATCH3Q96I76 525 aa10.36□□□□□ -0.75
GINS1-201ENST00000262460 PDLIM2Q96JY6 352 aa10.36□□□□□ -0.75
GINS1-201ENST00000262460 ZSWIM6Q9HCJ5 1215 aa10.36□□□□□ -0.75
GINS1-201ENST00000262460 LRRC37A3O60309 1634 aa10.35□□□□□ -0.75
GINS1-201ENST00000262460 NBPF26B4DH59 902 aa10.35□□□□□ -0.75
GINS1-201ENST00000262460 DDX58O95786 925 aaKnown RBP10.35□□□□□ -0.75
GINS1-201ENST00000262460 TATP17735 454 aaPredicted RBP10.35□□□□□ -0.75
GINS1-201ENST00000262460 HSP90AB4PQ58FF6 505 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms