RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 MAP3K2Q9Y2U5 619 aa20.77■□□□□ 0.92
TRAM1-201ENST00000262213 TAF6LQ9Y6J9 622 aa20.77■□□□□ 0.92
TRAM1-201ENST00000262213 LRRC37A3O60309 1634 aa20.77■□□□□ 0.92
TRAM1-201ENST00000262213 GOLGA6L6A8MZA4 724 aa20.77■□□□□ 0.92
TRAM1-201ENST00000262213 SIL1Q9H173 461 aa20.77■□□□□ 0.92
TRAM1-201ENST00000262213 DACT1Q9NYF0 836 aa20.77■□□□□ 0.92
TRAM1-201ENST00000262213 GTF2F1P35269 517 aaKnown RBP eCLIP20.76■□□□□ 0.91
TRAM1-201ENST00000262213 NECTIN1Q15223 517 aa20.76■□□□□ 0.91
TRAM1-201ENST00000262213 ATP2B3Q16720 1220 aa20.76■□□□□ 0.91
TRAM1-201ENST00000262213 MPRIPQ6WCQ1 1025 aa20.76■□□□□ 0.91
TRAM1-201ENST00000262213 MRVI1Q9Y6F6 885 aa20.76■□□□□ 0.91
TRAM1-201ENST00000262213 TEFQ10587 303 aa20.76■□□□□ 0.91
TRAM1-201ENST00000262213 LRMPQ12912 555 aa20.76■□□□□ 0.91
TRAM1-201ENST00000262213 FAM200AQ8TCP9 573 aa20.76■□□□□ 0.91
TRAM1-201ENST00000262213 TNMDQ9H2S6 317 aa20.76■□□□□ 0.91
TRAM1-201ENST00000262213 ANO6Q4KMQ2 910 aa20.75■□□□□ 0.91
TRAM1-201ENST00000262213 BOLA2Q9H3K6 86 aa20.75■□□□□ 0.91
TRAM1-201ENST00000262213 ADCY9O60503 1353 aa20.75■□□□□ 0.91
TRAM1-201ENST00000262213 UBR1Q8IWV7 1749 aa20.75■□□□□ 0.91
TRAM1-201ENST00000262213 PROSER3Q2NL68 480 aa20.75■□□□□ 0.91
TRAM1-201ENST00000262213 CCDC186Q7Z3E2 898 aa20.75■□□□□ 0.91
TRAM1-201ENST00000262213 EVI5LQ96CN4 794 aa20.75■□□□□ 0.91
TRAM1-201ENST00000262213 NRBP1Q9UHY1 535 aa20.75■□□□□ 0.91
TRAM1-201ENST00000262213 BTBD11A6QL63 1104 aa20.74■□□□□ 0.91
TRAM1-201ENST00000262213 TLR7Q9NYK1 1049 aaKnown RBP20.74■□□□□ 0.91
TRAM1-201ENST00000262213 SLC27A2O14975 620 aa20.74■□□□□ 0.91
TRAM1-201ENST00000262213 LARP1Q6PKG0 1096 aaKnown RBP20.74■□□□□ 0.91
TRAM1-201ENST00000262213 SPATA32Q96LK8 384 aa20.74■□□□□ 0.91
TRAM1-201ENST00000262213 TM6SF1Q9BZW5 370 aa20.74■□□□□ 0.91
TRAM1-201ENST00000262213 PIK3C2AO00443 1686 aa20.74■□□□□ 0.91
TRAM1-201ENST00000262213 AIMP1Q12904 312 aaKnown RBP20.74■□□□□ 0.91
TRAM1-201ENST00000262213 PDCL2Q8N4E4 241 aa20.74■□□□□ 0.91
TRAM1-201ENST00000262213 FSD1Q9BTV5 496 aa20.74■□□□□ 0.91
TRAM1-201ENST00000262213 USP42Q9H9J4 1324 aaKnown RBP20.73■□□□□ 0.91
TRAM1-201ENST00000262213 A0A0D9SFI3 127 aa20.73■□□□□ 0.91
TRAM1-201ENST00000262213 BLOC1S2Q6QNY1 142 aa20.73■□□□□ 0.91
TRAM1-201ENST00000262213 TRIM5Q9C035 493 aa20.73■□□□□ 0.91
TRAM1-201ENST00000262213 CBX8Q9HC52 389 aa20.73■□□□□ 0.91
TRAM1-201ENST00000262213 BABAM1Q9NWV8 329 aa20.73■□□□□ 0.91
TRAM1-201ENST00000262213 EID1Q9Y6B2 187 aa20.73■□□□□ 0.91
TRAM1-201ENST00000262213 PRAMEF22A3QJZ6 481 aa20.73■□□□□ 0.91
TRAM1-201ENST00000262213 NBPF6Q5VWK0 638 aa20.73■□□□□ 0.91
TRAM1-201ENST00000262213 NBPF4Q96M43 638 aa20.73■□□□□ 0.91
TRAM1-201ENST00000262213 C16orf45Q96MC5 204 aaPredicted RBP20.73■□□□□ 0.91
TRAM1-201ENST00000262213 KLHDC4Q8TBB5 520 aa20.72■□□□□ 0.91
TRAM1-201ENST00000262213 EAF2Q96CJ1 260 aaPredicted RBP20.72■□□□□ 0.91
TRAM1-201ENST00000262213 NWD1Q149M9 1564 aa20.72■□□□□ 0.91
TRAM1-201ENST00000262213 BICD2Q8TD16 824 aa20.72■□□□□ 0.91
TRAM1-201ENST00000262213 PLEKHG1Q9ULL1 1385 aa20.71■□□□□ 0.91
TRAM1-201ENST00000262213 TPM3P06753 285 aa20.71■□□□□ 0.91
TRAM1-201ENST00000262213 FOSBP53539 338 aa20.71■□□□□ 0.91
TRAM1-201ENST00000262213 EDC3Q96F86 508 aaKnown RBP20.71■□□□□ 0.91
TRAM1-201ENST00000262213 N4BP2Q86UW6 1770 aaPredicted RBP20.71■□□□□ 0.91
TRAM1-201ENST00000262213 ZNF530Q6P9A1 599 aaPredicted RBP20.71■□□□□ 0.91
TRAM1-201ENST00000262213 LRRC59Q96AG4 307 aaKnown RBP20.71■□□□□ 0.91
TRAM1-201ENST00000262213 DDX11Q96FC9 970 aa20.71■□□□□ 0.91
TRAM1-201ENST00000262213 U2AF2P26368 475 aaKnown RBP eCLIP20.7■□□□□ 0.98e-8■■■■■ 32.8
TRAM1-201ENST00000262213 CEBPZQ03701 1054 aaKnown RBP20.7■□□□□ 0.9
TRAM1-201ENST00000262213 G3BP1Q13283 466 aaKnown RBP eCLIP20.7■□□□□ 0.9
TRAM1-201ENST00000262213 MAP4K1Q92918 833 aa20.7■□□□□ 0.9
TRAM1-201ENST00000262213 PSMA5P28066 241 aa20.7■□□□□ 0.9
TRAM1-201ENST00000262213 SASH1O94885 1247 aa20.69■□□□□ 0.9
TRAM1-201ENST00000262213 SUCLG2Q96I99 432 aa20.69■□□□□ 0.9
TRAM1-201ENST00000262213 DNAJC25Q9H1X3 360 aa20.69■□□□□ 0.9
TRAM1-201ENST00000262213 JAK2O60674 1132 aa20.69■□□□□ 0.9
TRAM1-201ENST00000262213 PDCP20941 246 aa20.69■□□□□ 0.9
TRAM1-201ENST00000262213 ERC1Q8IUD2 1116 aa20.69■□□□□ 0.9
TRAM1-201ENST00000262213 KCNB2Q92953 911 aa20.69■□□□□ 0.9
TRAM1-201ENST00000262213 NR1I2O75469 434 aa20.68■□□□□ 0.9
TRAM1-201ENST00000262213 ZSCAN20P17040 1043 aaPredicted RBP20.68■□□□□ 0.9
TRAM1-201ENST00000262213 ZNF589Q86UQ0 364 aaPredicted RBP20.68■□□□□ 0.9
TRAM1-201ENST00000262213 BICC1Q9H694 974 aaKnown RBP20.68■□□□□ 0.9
TRAM1-201ENST00000262213 DBF4Q9UBU7 674 aaPredicted RBP20.68■□□□□ 0.9
TRAM1-201ENST00000262213 LEO1Q8WVC0 666 aaPredicted RBP20.68■□□□□ 0.9
TRAM1-201ENST00000262213 RBM33Q96EV2 1170 aaKnown RBP20.68■□□□□ 0.9
TRAM1-201ENST00000262213 NDUFB9Q9Y6M9 179 aa20.68■□□□□ 0.9
TRAM1-201ENST00000262213 CEMIPQ8WUJ3 1361 aa20.67■□□□□ 0.9
TRAM1-201ENST00000262213 RPS6KB1P23443 525 aa20.67■□□□□ 0.9
TRAM1-201ENST00000262213 TOB2Q14106 344 aaPredicted RBP20.67■□□□□ 0.9
TRAM1-201ENST00000262213 DIP2AQ14689 1571 aa20.67■□□□□ 0.9
TRAM1-201ENST00000262213 IGSF3O75054 1194 aa20.67■□□□□ 0.9
TRAM1-201ENST00000262213 MTX1Q13505 466 aa20.67■□□□□ 0.9
TRAM1-201ENST00000262213 RNF20Q5VTR2 975 aa20.67■□□□□ 0.9
TRAM1-201ENST00000262213 HSP90B1P14625 803 aaKnown RBP20.66■□□□□ 0.9
TRAM1-201ENST00000262213 DMTNQ08495 405 aa20.66■□□□□ 0.9
TRAM1-201ENST00000262213 SCAND2PQ9GZW5 306 aaPredicted RBP20.66■□□□□ 0.9
TRAM1-201ENST00000262213 CCDC9Q9Y3X0 531 aaKnown RBP20.66■□□□□ 0.9
TRAM1-201ENST00000262213 ZNF165P49910 485 aa20.66■□□□□ 0.9
TRAM1-201ENST00000262213 ZNF75DP51815 510 aa20.66■□□□□ 0.9
TRAM1-201ENST00000262213 KSR2Q6VAB6 950 aa20.66■□□□□ 0.9
TRAM1-201ENST00000262213 ZNF592Q92610 1267 aa20.66■□□□□ 0.9
TRAM1-201ENST00000262213 PPFIA3O75145 1194 aa20.65■□□□□ 0.9
TRAM1-201ENST00000262213 CHGBP05060 677 aa20.65■□□□□ 0.9
TRAM1-201ENST00000262213 NAA30Q147X3 362 aaPredicted RBP20.65■□□□□ 0.9
TRAM1-201ENST00000262213 PGBD1Q96JS3 809 aa20.65■□□□□ 0.9
TRAM1-201ENST00000262213 LRRC2Q9BYS8 371 aa20.65■□□□□ 0.9
TRAM1-201ENST00000262213 ELP1O95163 1332 aa20.65■□□□□ 0.9
TRAM1-201ENST00000262213 CRYBG1Q9Y4K1 1723 aa20.64■□□□□ 0.9
TRAM1-201ENST00000262213 CLSTN2Q9H4D0 955 aa20.64■□□□□ 0.9
TRAM1-201ENST00000262213 NPHP3Q7Z494 1330 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms