RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 NSFL1CQ9UNZ2 370 aaKnown RBP14.09□□□□□ -0.15
SPG11-201ENST00000261866 PARP3Q9Y6F1 533 aa14.09□□□□□ -0.15
SPG11-201ENST00000261866 HEATR3Q7Z4Q2 680 aa14.09□□□□□ -0.15
SPG11-201ENST00000261866 ECHDC1Q9NTX5 307 aa14.09□□□□□ -0.15
SPG11-201ENST00000261866 HMGN5P82970 282 aaKnown RBP14.09□□□□□ -0.15
SPG11-201ENST00000261866 LMBR1LQ6UX01 489 aa14.09□□□□□ -0.15
SPG11-201ENST00000261866 ZNF397Q8NF99 534 aaPredicted RBP14.09□□□□□ -0.15
SPG11-201ENST00000261866 ZBTB9Q96C00 473 aa14.09□□□□□ -0.15
SPG11-201ENST00000261866 SYCP3Q8IZU3 236 aa14.08□□□□□ -0.15
SPG11-201ENST00000261866 CWF19L2Q2TBE0 894 aaKnown RBP14.08□□□□□ -0.15
SPG11-201ENST00000261866 THOC2Q8NI27 1593 aaKnown RBP14.08□□□□□ -0.16
SPG11-201ENST00000261866 ZRSR2Q15696 482 aaKnown RBP14.08□□□□□ -0.16
SPG11-201ENST00000261866 SMTNL1A8MU46 457 aa14.08□□□□□ -0.16
SPG11-201ENST00000261866 SP4Q02446 784 aa14.08□□□□□ -0.16
SPG11-201ENST00000261866 GOPCQ9HD26 462 aa14.08□□□□□ -0.16
SPG11-201ENST00000261866 TTF1Q15361 905 aaPredicted RBP14.08□□□□□ -0.16
SPG11-201ENST00000261866 CRNKL1Q9BZJ0 848 aaKnown RBP14.08□□□□□ -0.16
SPG11-201ENST00000261866 TRIM21P19474 475 aaKnown RBP14.08□□□□□ -0.16
SPG11-201ENST00000261866 DRC1Q96MC2 740 aa14.08□□□□□ -0.16
SPG11-201ENST00000261866 NLRP3Q96P20 1036 aa14.08□□□□□ -0.16
SPG11-201ENST00000261866 ZBTB21Q9ULJ3 1066 aa14.08□□□□□ -0.16
SPG11-201ENST00000261866 URB2Q14146 1524 aaKnown RBP14.08□□□□□ -0.16
SPG11-201ENST00000261866 BAG4O95429 457 aaKnown RBP14.08□□□□□ -0.16
SPG11-201ENST00000261866 ARHGAP29Q52LW3 1261 aa14.08□□□□□ -0.16
SPG11-201ENST00000261866 UTP14AQ9BVJ6 771 aaKnown RBP14.08□□□□□ -0.16
SPG11-201ENST00000261866 POTEJP0CG39 1038 aa14.07□□□□□ -0.16
SPG11-201ENST00000261866 TDRD12Q587J7 1177 aaKnown RBP14.07□□□□□ -0.16
SPG11-201ENST00000261866 IL27Q8NEV9 243 aa14.07□□□□□ -0.16
SPG11-201ENST00000261866 NUP88Q99567 741 aaPredicted RBP14.07□□□□□ -0.16
SPG11-201ENST00000261866 GNPATO15228 680 aa14.07□□□□□ -0.16
SPG11-201ENST00000261866 IGHDP01880 384 aa14.07□□□□□ -0.16
SPG11-201ENST00000261866 PIK3R4Q99570 1358 aa14.07□□□□□ -0.16
SPG11-201ENST00000261866 ERICH4A6NGS2 130 aa14.07□□□□□ -0.16
SPG11-201ENST00000261866 IARSP41252 1262 aaKnown RBP14.07□□□□□ -0.16
SPG11-201ENST00000261866 MTHFSDQ2M296 383 aaKnown RBP14.07□□□□□ -0.16
SPG11-201ENST00000261866 AKNAD1Q5T1N1 836 aa14.07□□□□□ -0.16
SPG11-201ENST00000261866 FSIP1Q8NA03 581 aa14.07□□□□□ -0.16
SPG11-201ENST00000261866 C8orf58Q8NAV2 365 aa14.07□□□□□ -0.16
SPG11-201ENST00000261866 PTPRCP08575 1304 aa14.07□□□□□ -0.16
SPG11-201ENST00000261866 FKBP15Q5T1M5 1219 aa14.07□□□□□ -0.16
SPG11-201ENST00000261866 LAMC3Q9Y6N6 1575 aa14.07□□□□□ -0.16
SPG11-201ENST00000261866 ANAPC15P60006 121 aa14.07□□□□□ -0.16
SPG11-201ENST00000261866 EHMT1Q9H9B1 1298 aa14.07□□□□□ -0.16
SPG11-201ENST00000261866 PRKG1Q13976 671 aa14.07□□□□□ -0.16
SPG11-201ENST00000261866 TBC1D9Q6ZT07 1266 aa14.07□□□□□ -0.16
SPG11-201ENST00000261866 CCDC112Q8NEF3 446 aa14.07□□□□□ -0.16
SPG11-201ENST00000261866 NPHP3Q7Z494 1330 aa14.06□□□□□ -0.16
SPG11-201ENST00000261866 SCAF11Q99590 1463 aaKnown RBP14.06□□□□□ -0.16
SPG11-201ENST00000261866 IL2RBP14784 551 aa14.06□□□□□ -0.16
SPG11-201ENST00000261866 EIF4A2Q14240 407 aaKnown RBP14.06□□□□□ -0.16
SPG11-201ENST00000261866 OGFOD1Q8N543 542 aa14.06□□□□□ -0.16
SPG11-201ENST00000261866 SAP30BPQ9UHR5 308 aaKnown RBP14.06□□□□□ -0.16
SPG11-201ENST00000261866 RTCBQ9Y3I0 505 aaKnown RBP14.06□□□□□ -0.16
SPG11-201ENST00000261866 LDHCP07864 332 aa14.06□□□□□ -0.16
SPG11-201ENST00000261866 KDM5BQ9UGL1 1544 aa14.06□□□□□ -0.16
SPG11-201ENST00000261866 JAKMIP3Q5VZ66 844 aa14.06□□□□□ -0.16
SPG11-201ENST00000261866 DPH6Q7L8W6 267 aa14.06□□□□□ -0.16
SPG11-201ENST00000261866 ASXL2Q76L83 1435 aa14.06□□□□□ -0.16
SPG11-201ENST00000261866 GOLGA6L10A0A0M3HER8 536 aa14.06□□□□□ -0.16
SPG11-201ENST00000261866 SPA17Q15506 151 aa14.06□□□□□ -0.16
SPG11-201ENST00000261866 GBP2P32456 591 aaPredicted RBP14.05□□□□□ -0.16
SPG11-201ENST00000261866 TERF1P54274 439 aa14.05□□□□□ -0.16
SPG11-201ENST00000261866 CCDC150Q8NCX0 1101 aa14.05□□□□□ -0.16
SPG11-201ENST00000261866 NEK1Q96PY6 1258 aa14.05□□□□□ -0.16
SPG11-201ENST00000261866 NCOA1Q15788 1441 aa14.05□□□□□ -0.16
SPG11-201ENST00000261866 TRMT1Q9NXH9 659 aaKnown RBP14.05□□□□□ -0.16
SPG11-201ENST00000261866 HDAC9Q9UKV0 1011 aa14.05□□□□□ -0.16
SPG11-201ENST00000261866 ATP2B3Q16720 1220 aa14.05□□□□□ -0.16
SPG11-201ENST00000261866 IFIT1BQ5T764 474 aaKnown RBP14.05□□□□□ -0.16
SPG11-201ENST00000261866 ORC3Q9UBD5 711 aaPredicted RBP14.05□□□□□ -0.16
SPG11-201ENST00000261866 TNNQ9UQP3 1299 aa14.05□□□□□ -0.16
SPG11-201ENST00000261866 RXRAP19793 462 aa14.05□□□□□ -0.16
SPG11-201ENST00000261866 POLD1P28340 1107 aa14.05□□□□□ -0.16
SPG11-201ENST00000261866 MCM4P33991 863 aa14.05□□□□□ -0.16
SPG11-201ENST00000261866 PKD2L1Q9P0L9 805 aa14.05□□□□□ -0.16
SPG11-201ENST00000261866 RBM27Q9P2N5 1060 aaKnown RBP14.05□□□□□ -0.16
SPG11-201ENST00000261866 LIMCH1Q9UPQ0 1083 aa14.05□□□□□ -0.16
SPG11-201ENST00000261866 CALM1P0DP23 149 aa14.05□□□□□ -0.16
SPG11-201ENST00000261866 CALM2P0DP24 149 aa14.05□□□□□ -0.16
SPG11-201ENST00000261866 CALM3P0DP25 149 aa14.05□□□□□ -0.16
SPG11-201ENST00000261866 AFMP43652 599 aa14.05□□□□□ -0.16
SPG11-201ENST00000261866 NCOA7Q8NI08 942 aa14.05□□□□□ -0.16
SPG11-201ENST00000261866 CCDC102AQ96A19 550 aa14.05□□□□□ -0.16
SPG11-201ENST00000261866 DHX29Q7Z478 1369 aaKnown RBP14.04□□□□□ -0.16
SPG11-201ENST00000261866 CUL7Q14999 1698 aa14.04□□□□□ -0.16
SPG11-201ENST00000261866 MTIF2P46199 727 aaKnown RBP14.04□□□□□ -0.16
SPG11-201ENST00000261866 NAA16Q6N069 864 aaPredicted RBP14.04□□□□□ -0.16
SPG11-201ENST00000261866 FERMT2Q96AC1 680 aa14.04□□□□□ -0.16
SPG11-201ENST00000261866 CALML4Q96GE6 196 aa14.04□□□□□ -0.16
SPG11-201ENST00000261866 KLF18A0A0U1RQI7 1052 aa14.04□□□□□ -0.16
SPG11-201ENST00000261866 CCDC40Q4G0X9 1142 aa14.04□□□□□ -0.16
SPG11-201ENST00000261866 RIMS2Q9UQ26 1411 aa14.04□□□□□ -0.16
SPG11-201ENST00000261866 PRC1O43663 620 aa14.04□□□□□ -0.16
SPG11-201ENST00000261866 SLC9C2Q5TAH2 1124 aa14.04□□□□□ -0.16
SPG11-201ENST00000261866 RAB34Q9BZG1 259 aa14.04□□□□□ -0.16
SPG11-201ENST00000261866 HMGB1P09429 215 aaKnown RBP14.04□□□□□ -0.16
SPG11-201ENST00000261866 FAM212AQ96EL1 285 aa14.04□□□□□ -0.16
SPG11-201ENST00000261866 KIF20AO95235 890 aa14.04□□□□□ -0.16
SPG11-201ENST00000261866 FAM98CQ17RN3 349 aaKnown RBP14.04□□□□□ -0.16
SPG11-201ENST00000261866 MAGEB6Q8N7X4 407 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms