RNA–Protein interactions for RNA: ENST00000261407.8

LPCAT3-201, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT3, Length 2,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-201ENST00000261407 RUFY2Q8WXA3 655 aa23.17■■□□□ 1.3
LPCAT3-201ENST00000261407 TTC5Q8N0Z6 440 aa23.16■■□□□ 1.3
LPCAT3-201ENST00000261407 NDUFB9Q9Y6M9 179 aa23.16■■□□□ 1.3
LPCAT3-201ENST00000261407 A0A0D9SFI3 127 aa23.16■■□□□ 1.3
LPCAT3-201ENST00000261407 SNRPA1P09661 255 aaKnown RBP23.16■■□□□ 1.3
LPCAT3-201ENST00000261407 NECTIN1Q15223 517 aa23.16■■□□□ 1.3
LPCAT3-201ENST00000261407 USP48Q86UV5 1035 aa23.15■■□□□ 1.3
LPCAT3-201ENST00000261407 PPP1R9BQ96SB3 815 aa23.15■■□□□ 1.3
LPCAT3-201ENST00000261407 CCDC171Q6TFL3 1326 aa23.15■■□□□ 1.3
LPCAT3-201ENST00000261407 CCDC173Q0VFZ6 552 aa23.15■■□□□ 1.3
LPCAT3-201ENST00000261407 UBE3BQ7Z3V4 1068 aa23.15■■□□□ 1.3
LPCAT3-201ENST00000261407 DCAF5Q96JK2 942 aa23.15■■□□□ 1.3
LPCAT3-201ENST00000261407 RBM8AQ9Y5S9 174 aaKnown RBP23.15■■□□□ 1.3
LPCAT3-201ENST00000261407 TAF6LQ9Y6J9 622 aa23.15■■□□□ 1.3
LPCAT3-201ENST00000261407 WDR33Q9C0J8 1336 aaKnown RBP23.14■■□□□ 1.3
LPCAT3-201ENST00000261407 CHGBP05060 677 aa23.14■■□□□ 1.29
LPCAT3-201ENST00000261407 CCDC83Q8IWF9 413 aa23.14■■□□□ 1.29
LPCAT3-201ENST00000261407 COL18A1P39060 1754 aa23.14■■□□□ 1.29
LPCAT3-201ENST00000261407 SYT1P21579 422 aa23.13■■□□□ 1.29
LPCAT3-201ENST00000261407 PDRG1Q9NUG6 133 aa23.13■■□□□ 1.29
LPCAT3-201ENST00000261407 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.13■■□□□ 1.29
LPCAT3-201ENST00000261407 STRCP1A6NGW2 1772 aa23.13■■□□□ 1.29
LPCAT3-201ENST00000261407 TCHHQ07283 1943 aa23.13■■□□□ 1.29
LPCAT3-201ENST00000261407 LRSAM1Q6UWE0 723 aa23.13■■□□□ 1.29
LPCAT3-201ENST00000261407 LMTK3Q96Q04 1460 aa23.13■■□□□ 1.29
LPCAT3-201ENST00000261407 ST3GAL1Q11201 340 aa23.12■■□□□ 1.29
LPCAT3-201ENST00000261407 FSD1Q9BTV5 496 aa23.12■■□□□ 1.29
LPCAT3-201ENST00000261407 ZSWIM6Q9HCJ5 1215 aa23.12■■□□□ 1.29
LPCAT3-201ENST00000261407 CABP4P57796 275 aa23.12■■□□□ 1.29
LPCAT3-201ENST00000261407 CREB3L3Q68CJ9 461 aa23.12■■□□□ 1.29
LPCAT3-201ENST00000261407 TCEANC2Q96MN5 208 aa23.12■■□□□ 1.29
LPCAT3-201ENST00000261407 FMNL2Q96PY5 1086 aa23.12■■□□□ 1.29
LPCAT3-201ENST00000261407 CNPY2Q9Y2B0 182 aa23.12■■□□□ 1.29
LPCAT3-201ENST00000261407 RFX5P48382 616 aaPredicted RBP23.11■■□□□ 1.29
LPCAT3-201ENST00000261407 PTPN12Q05209 780 aaKnown RBP23.11■■□□□ 1.29
LPCAT3-201ENST00000261407 ZNF589Q86UQ0 364 aaPredicted RBP23.11■■□□□ 1.29
LPCAT3-201ENST00000261407 RNF214Q8ND24 703 aa23.11■■□□□ 1.29
LPCAT3-201ENST00000261407 MAP4K1Q92918 833 aa23.11■■□□□ 1.29
LPCAT3-201ENST00000261407 MBD3O95983 291 aa23.11■■□□□ 1.29
LPCAT3-201ENST00000261407 KCNJ4P48050 445 aa23.11■■□□□ 1.29
LPCAT3-201ENST00000261407 TFCP2Q12800 502 aa23.11■■□□□ 1.29
LPCAT3-201ENST00000261407 NECAB1Q8N987 351 aa23.11■■□□□ 1.29
LPCAT3-201ENST00000261407 KCNB2Q92953 911 aa23.11■■□□□ 1.29
LPCAT3-201ENST00000261407 DBNLQ9UJU6 430 aaKnown RBP23.11■■□□□ 1.29
LPCAT3-201ENST00000261407 STX6O43752 255 aa23.1■■□□□ 1.29
LPCAT3-201ENST00000261407 ME3Q16798 604 aa23.1■■□□□ 1.29
LPCAT3-201ENST00000261407 SMC3Q9UQE7 1217 aa23.1■■□□□ 1.29
LPCAT3-201ENST00000261407 CYP46A1Q9Y6A2 500 aa23.1■■□□□ 1.29
LPCAT3-201ENST00000261407 ZSCAN22P10073 491 aaPredicted RBP23.1■■□□□ 1.29
LPCAT3-201ENST00000261407 VPS53Q5VIR6 699 aa23.1■■□□□ 1.29
LPCAT3-201ENST00000261407 A0A087WZG4 1122 aa23.09■■□□□ 1.29
LPCAT3-201ENST00000261407 HSPA2P54652 639 aa23.09■■□□□ 1.29
LPCAT3-201ENST00000261407 ANP32BQ92688 251 aaKnown RBP23.09■■□□□ 1.29
LPCAT3-201ENST00000261407 CCDC9Q9Y3X0 531 aaKnown RBP23.09■■□□□ 1.29
LPCAT3-201ENST00000261407 TNS3Q68CZ2 1445 aa23.09■■□□□ 1.29
LPCAT3-201ENST00000261407 SLC27A2O14975 620 aa23.08■■□□□ 1.29
LPCAT3-201ENST00000261407 GJB2P29033 226 aa23.08■■□□□ 1.29
LPCAT3-201ENST00000261407 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.08■■□□□ 1.29
LPCAT3-201ENST00000261407 SPATA31A3Q5VYP0 1347 aa23.08■■□□□ 1.29
LPCAT3-201ENST00000261407 TPCN1Q9ULQ1 816 aa23.08■■□□□ 1.29
LPCAT3-201ENST00000261407 NBPF26B4DH59 902 aa23.07■■□□□ 1.28
LPCAT3-201ENST00000261407 NBPF14Q5TI25 921 aa23.07■■□□□ 1.28
LPCAT3-201ENST00000261407 NBPF10Q6P3W6 841 aaKnown RBP23.07■■□□□ 1.28
LPCAT3-201ENST00000261407 NBPF15Q8N660 670 aa23.07■■□□□ 1.28
LPCAT3-201ENST00000261407 COPRSQ9NQ92 184 aa23.07■■□□□ 1.28
LPCAT3-201ENST00000261407 ZKSCAN1P17029 563 aaPredicted RBP23.07■■□□□ 1.28
LPCAT3-201ENST00000261407 CADPS2Q86UW7 1296 aa23.07■■□□□ 1.28
LPCAT3-201ENST00000261407 TNNI3KQ59H18 835 aa23.06■■□□□ 1.28
LPCAT3-201ENST00000261407 TM6SF1Q9BZW5 370 aa23.06■■□□□ 1.28
LPCAT3-201ENST00000261407 FPGT-TNNI3KV9GXZ4 949 aa23.06■■□□□ 1.28
LPCAT3-201ENST00000261407 COL15A1P39059 1388 aa23.05■■□□□ 1.28
LPCAT3-201ENST00000261407 F13A1P00488 732 aa23.05■■□□□ 1.28
LPCAT3-201ENST00000261407 TTLL7Q6ZT98 887 aa23.05■■□□□ 1.28
LPCAT3-201ENST00000261407 DBNDD2Q9BQY9 259 aa23.05■■□□□ 1.28
LPCAT3-201ENST00000261407 CASP7P55210 303 aa23.05■■□□□ 1.28
LPCAT3-201ENST00000261407 RABL6Q3YEC7 729 aaPredicted RBP23.05■■□□□ 1.28
LPCAT3-201ENST00000261407 MRC1P22897 1456 aa23.04■■□□□ 1.28
LPCAT3-201ENST00000261407 LMBR1LQ6UX01 489 aa23.04■■□□□ 1.28
LPCAT3-201ENST00000261407 SEC62Q99442 399 aaKnown RBP23.04■■□□□ 1.28
LPCAT3-201ENST00000261407 SNRKQ9NRH2 765 aa23.04■■□□□ 1.28
LPCAT3-201ENST00000261407 HIP1O00291 1037 aa23.03■■□□□ 1.28
LPCAT3-201ENST00000261407 FIBPO43427 364 aa23.03■■□□□ 1.28
LPCAT3-201ENST00000261407 CCDC129Q6ZRS4 1044 aa23.03■■□□□ 1.28
LPCAT3-201ENST00000261407 CHMP3Q9Y3E7 222 aa23.03■■□□□ 1.28
LPCAT3-201ENST00000261407 MED23Q9ULK4 1368 aa23.03■■□□□ 1.28
LPCAT3-201ENST00000261407 A1BGP04217 495 aa23.03■■□□□ 1.28
LPCAT3-201ENST00000261407 DNAJC2Q99543 621 aaKnown RBP23.03■■□□□ 1.28
LPCAT3-201ENST00000261407 MTMR6Q9Y217 621 aa23.03■■□□□ 1.28
LPCAT3-201ENST00000261407 SLFNL1Q499Z3 407 aa23.02■■□□□ 1.28
LPCAT3-201ENST00000261407 PLBD2Q8NHP8 589 aa23.02■■□□□ 1.28
LPCAT3-201ENST00000261407 NAP1L5Q96NT1 182 aaPredicted RBP23.02■■□□□ 1.28
LPCAT3-201ENST00000261407 DNM1Q05193 864 aaKnown RBP23.02■■□□□ 1.28
LPCAT3-201ENST00000261407 TOM1L2Q6ZVM7 507 aa23.02■■□□□ 1.28
LPCAT3-201ENST00000261407 PDLIM2Q96JY6 352 aa23.02■■□□□ 1.28
LPCAT3-201ENST00000261407 TAF5LO75529 589 aa23.01■■□□□ 1.27
LPCAT3-201ENST00000261407 AFDNP55196 1824 aaKnown RBP23.01■■□□□ 1.27
LPCAT3-201ENST00000261407 ATP5JP18859 108 aa23.01■■□□□ 1.27
LPCAT3-201ENST00000261407 BRINP3Q76B58 766 aa23.01■■□□□ 1.27
LPCAT3-201ENST00000261407 GLI3P10071 1580 aa23■■□□□ 1.27
LPCAT3-201ENST00000261407 DCCP43146 1447 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms