RNA–Protein interactions for RNA: ENST00000260197.11

SORL1-201, Transcript of sortilin related receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORL1, Length 10,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-201ENST00000260197 ZSCAN16Q9H4T2 348 aaPredicted RBP13.4□□□□□ -0.26
SORL1-201ENST00000260197 CCDC61Q9Y6R9 512 aa13.4□□□□□ -0.26
SORL1-201ENST00000260197 URI1O94763 535 aaPredicted RBP13.4□□□□□ -0.26
SORL1-201ENST00000260197 HLTFQ14527 1009 aaKnown RBP eCLIP13.4□□□□□ -0.26
SORL1-201ENST00000260197 TTC22Q5TAA0 569 aa13.4□□□□□ -0.26
SORL1-201ENST00000260197 C20orf194Q5TEA3 1177 aa13.4□□□□□ -0.26
SORL1-201ENST00000260197 SMARCC1Q92922 1105 aaPredicted RBP13.4□□□□□ -0.26
SORL1-201ENST00000260197 AMPD3Q01432 767 aa13.4□□□□□ -0.27
SORL1-201ENST00000260197 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.4□□□□□ -0.27
SORL1-201ENST00000260197 MACROD2A1Z1Q3 448 aa13.39□□□□□ -0.27
SORL1-201ENST00000260197 IVLP07476 585 aa13.39□□□□□ -0.27
SORL1-201ENST00000260197 UVSSAQ2YD98 709 aa13.39□□□□□ -0.27
SORL1-201ENST00000260197 JADE2Q9NQC1 790 aa13.39□□□□□ -0.27
SORL1-201ENST00000260197 GJB2P29033 226 aa13.39□□□□□ -0.27
SORL1-201ENST00000260197 MIS18AQ9NYP9 233 aa13.39□□□□□ -0.27
SORL1-201ENST00000260197 ITSN1Q15811 1721 aa13.39□□□□□ -0.27
SORL1-201ENST00000260197 CDC42BPBQ9Y5S2 1711 aa13.39□□□□□ -0.27
SORL1-201ENST00000260197 CKAP4Q07065 602 aaKnown RBP13.39□□□□□ -0.27
SORL1-201ENST00000260197 IFI16Q16666 785 aaKnown RBP13.39□□□□□ -0.27
SORL1-201ENST00000260197 CTAGE1Q96RT6 745 aa13.39□□□□□ -0.27
SORL1-201ENST00000260197 ZPR1O75312 459 aa13.39□□□□□ -0.27
SORL1-201ENST00000260197 CTAGE9A4FU28 777 aa13.39□□□□□ -0.27
SORL1-201ENST00000260197 ZNF165P49910 485 aa13.39□□□□□ -0.27
SORL1-201ENST00000260197 ABCF2Q9UG63 623 aa13.39□□□□□ -0.27
SORL1-201ENST00000260197 CALML4Q96GE6 196 aa13.38□□□□□ -0.27
SORL1-201ENST00000260197 IFIT1P09914 478 aaKnown RBP13.38□□□□□ -0.27
SORL1-201ENST00000260197 BAG4O95429 457 aaKnown RBP13.38□□□□□ -0.27
SORL1-201ENST00000260197 TIGD1Q96MW7 591 aa13.38□□□□□ -0.27
SORL1-201ENST00000260197 PODXL2Q9NZ53 605 aa13.38□□□□□ -0.27
SORL1-201ENST00000260197 RASAL2Q9UJF2 1139 aa13.38□□□□□ -0.27
SORL1-201ENST00000260197 TUBB4BP68371 445 aa13.38□□□□□ -0.27
SORL1-201ENST00000260197 ARFGAP3Q9NP61 516 aa13.38□□□□□ -0.27
SORL1-201ENST00000260197 RMND1Q9NWS8 449 aa13.38□□□□□ -0.27
SORL1-201ENST00000260197 MINDY4BA8MYZ0 360 aa13.38□□□□□ -0.27
SORL1-201ENST00000260197 POLR3DP05423 398 aaPredicted RBP13.38□□□□□ -0.27
SORL1-201ENST00000260197 SREK1Q8WXA9 508 aaKnown RBP13.38□□□□□ -0.27
SORL1-201ENST00000260197 BOLA2Q9H3K6 86 aa13.38□□□□□ -0.27
SORL1-201ENST00000260197 MAATS1Q7Z4T9 603 aa13.38□□□□□ -0.27
SORL1-201ENST00000260197 TCP11L1Q9NUJ3 509 aa13.38□□□□□ -0.27
SORL1-201ENST00000260197 CDC42BPAQ5VT25 1732 aa13.38□□□□□ -0.27
SORL1-201ENST00000260197 DISP3Q9P2K9 1392 aa13.38□□□□□ -0.27
SORL1-201ENST00000260197 NUCB1Q02818 461 aa13.38□□□□□ -0.27
SORL1-201ENST00000260197 CCDC172P0C7W6 258 aa13.37□□□□□ -0.27
SORL1-201ENST00000260197 TMOD3Q9NYL9 352 aa13.37□□□□□ -0.27
SORL1-201ENST00000260197 IKBKGQ9Y6K9 419 aa13.37□□□□□ -0.27
SORL1-201ENST00000260197 ZSCAN29Q8IWY8 852 aaPredicted RBP13.37□□□□□ -0.27
SORL1-201ENST00000260197 FSD2A1L4K1 749 aa13.37□□□□□ -0.27
SORL1-201ENST00000260197 DHX37Q8IY37 1157 aaKnown RBP13.37□□□□□ -0.27
SORL1-201ENST00000260197 DNAAF4Q8WXU2 420 aa13.37□□□□□ -0.27
SORL1-201ENST00000260197 PLVAPQ9BX97 442 aa13.37□□□□□ -0.27
SORL1-201ENST00000260197 TRMT1Q9NXH9 659 aaKnown RBP13.37□□□□□ -0.27
SORL1-201ENST00000260197 CTNNA2P26232 953 aa13.37□□□□□ -0.27
SORL1-201ENST00000260197 MTIF2P46199 727 aaKnown RBP13.37□□□□□ -0.27
SORL1-201ENST00000260197 PLB1Q6P1J6 1458 aa13.37□□□□□ -0.27
SORL1-201ENST00000260197 PPM1EQ8WY54 764 aa13.37□□□□□ -0.27
SORL1-201ENST00000260197 MKNK2Q9HBH9 465 aa13.37□□□□□ -0.27
SORL1-201ENST00000260197 EXOC1Q9NV70 894 aa13.37□□□□□ -0.27
SORL1-201ENST00000260197 NUDT16Q96DE0 195 aaKnown RBP13.37□□□□□ -0.27
SORL1-201ENST00000260197 UBE4AQ14139 1066 aa13.37□□□□□ -0.27
SORL1-201ENST00000260197 TDRD12Q587J7 1177 aaKnown RBP13.37□□□□□ -0.27
SORL1-201ENST00000260197 STXBP4Q6ZWJ1 553 aa13.37□□□□□ -0.27
SORL1-201ENST00000260197 BCCIPQ9P287 314 aaKnown RBP eCLIP13.37□□□□□ -0.27
SORL1-201ENST00000260197 NSRP1Q9H0G5 558 aaKnown RBP13.37□□□□□ -0.27
SORL1-201ENST00000260197 RANBP6O60518 1105 aaKnown RBP13.36□□□□□ -0.27
SORL1-201ENST00000260197 CCDC96Q2M329 555 aa13.36□□□□□ -0.27
SORL1-201ENST00000260197 SHANK2Q9UPX8 1470 aa13.36□□□□□ -0.27
SORL1-201ENST00000260197 STMN4Q9H169 189 aaPredicted RBP13.36□□□□□ -0.27
SORL1-201ENST00000260197 MICAL3Q7RTP6 2002 aa13.36□□□□□ -0.27
SORL1-201ENST00000260197 ZFYVE9O95405 1425 aa13.36□□□□□ -0.27
SORL1-201ENST00000260197 ANKRD18BA2A2Z9 1011 aa13.36□□□□□ -0.27
SORL1-201ENST00000260197 ANKLE2Q86XL3 938 aa13.36□□□□□ -0.27
SORL1-201ENST00000260197 KCNG4Q8TDN1 519 aa13.36□□□□□ -0.27
SORL1-201ENST00000260197 HSF2BPO75031 334 aa13.36□□□□□ -0.27
SORL1-201ENST00000260197 NOS1P29475 1434 aa13.36□□□□□ -0.27
SORL1-201ENST00000260197 CRACR2BQ8N4Y2 399 aaPredicted RBP13.36□□□□□ -0.27
SORL1-201ENST00000260197 DBF4Q9UBU7 674 aaPredicted RBP13.36□□□□□ -0.27
SORL1-201ENST00000260197 LMAN1P49257 510 aa13.36□□□□□ -0.27
SORL1-201ENST00000260197 DNA2P51530 1060 aa13.36□□□□□ -0.27
SORL1-201ENST00000260197 TBC1D5Q92609 795 aa13.36□□□□□ -0.27
SORL1-201ENST00000260197 THUMPD2Q9BTF0 503 aaKnown RBP13.36□□□□□ -0.27
SORL1-201ENST00000260197 QRICH2Q9H0J4 1663 aa13.36□□□□□ -0.27
SORL1-201ENST00000260197 FERMT1Q9BQL6 677 aa13.35□□□□□ -0.27
SORL1-201ENST00000260197 MYO18AQ92614 2054 aaKnown RBP13.35□□□□□ -0.27
SORL1-201ENST00000260197 ZNF213O14771 459 aa13.35□□□□□ -0.27
SORL1-201ENST00000260197 BMP15O95972 392 aa13.35□□□□□ -0.27
SORL1-201ENST00000260197 BMS1Q14692 1282 aaKnown RBP13.35□□□□□ -0.27
SORL1-201ENST00000260197 MFSD6Q6ZSS7 791 aa13.35□□□□□ -0.27
SORL1-201ENST00000260197 MYH13Q9UKX3 1938 aa13.35□□□□□ -0.27
SORL1-201ENST00000260197 GTF2F1P35269 517 aaKnown RBP eCLIP13.35□□□□□ -0.27
SORL1-201ENST00000260197 PDE4BQ07343 736 aa13.35□□□□□ -0.27
SORL1-201ENST00000260197 C6orf163Q5TEZ5 329 aa13.35□□□□□ -0.27
SORL1-201ENST00000260197 TTC12Q9H892 705 aaPredicted RBP13.35□□□□□ -0.27
SORL1-201ENST00000260197 ECHDC1Q9NTX5 307 aa13.35□□□□□ -0.27
SORL1-201ENST00000260197 METAP2P50579 478 aaKnown RBP eCLIP13.35□□□□□ -0.27
SORL1-201ENST00000260197 CCDC184Q52MB2 194 aa13.35□□□□□ -0.27
SORL1-201ENST00000260197 SPECC1Q5M775 1068 aa13.35□□□□□ -0.27
SORL1-201ENST00000260197 ERMNQ8TAM6 284 aa13.35□□□□□ -0.27
SORL1-201ENST00000260197 GOLGA8AA7E2F4 631 aa13.35□□□□□ -0.27
SORL1-201ENST00000260197 SYKP43405 635 aa13.35□□□□□ -0.27
SORL1-201ENST00000260197 HDAC1Q13547 482 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms