RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 ANKRD1Q15327 319 aa18.77■□□□□ 0.59
RFX1-201ENST00000254325 GLIPR1L2Q4G1C9 344 aa18.77■□□□□ 0.59
RFX1-201ENST00000254325 RNF214Q8ND24 703 aa18.77■□□□□ 0.59
RFX1-201ENST00000254325 FAM227BQ96M60 508 aa18.77■□□□□ 0.59
RFX1-201ENST00000254325 GPTP24298 496 aa18.76■□□□□ 0.59
RFX1-201ENST00000254325 CNNM1Q9NRU3 951 aa18.76■□□□□ 0.59
RFX1-201ENST00000254325 MTX1Q13505 466 aa18.76■□□□□ 0.59
RFX1-201ENST00000254325 GOLIM4O00461 696 aa18.76■□□□□ 0.59
RFX1-201ENST00000254325 NPHP1O15259 732 aa18.76■□□□□ 0.59
RFX1-201ENST00000254325 IFIT1P09914 478 aaKnown RBP18.76■□□□□ 0.59
RFX1-201ENST00000254325 INTS4Q96HW7 963 aaKnown RBP18.76■□□□□ 0.59
RFX1-201ENST00000254325 TCEANC2Q96MN5 208 aa18.76■□□□□ 0.59
RFX1-201ENST00000254325 WDR17Q8IZU2 1322 aa18.75■□□□□ 0.59
RFX1-201ENST00000254325 LARP1BQ659C4 914 aaKnown RBP18.75■□□□□ 0.59
RFX1-201ENST00000254325 CCDC171Q6TFL3 1326 aa18.75■□□□□ 0.59
RFX1-201ENST00000254325 BTG4Q9NY30 223 aa18.75■□□□□ 0.59
RFX1-201ENST00000254325 TTLL7Q6ZT98 887 aa18.75■□□□□ 0.59
RFX1-201ENST00000254325 SH2B1Q9NRF2 756 aaPredicted RBP18.75■□□□□ 0.59
RFX1-201ENST00000254325 RBM27Q9P2N5 1060 aaKnown RBP18.75■□□□□ 0.59
RFX1-201ENST00000254325 NUTM2BA6NNL0 878 aaPredicted RBP18.74■□□□□ 0.59
RFX1-201ENST00000254325 NUTM2EB1AL46 878 aaPredicted RBP18.74■□□□□ 0.59
RFX1-201ENST00000254325 FOSBP53539 338 aa18.74■□□□□ 0.59
RFX1-201ENST00000254325 KRT32Q14532 448 aa18.74■□□□□ 0.59
RFX1-201ENST00000254325 TNNI3KQ59H18 835 aa18.74■□□□□ 0.59
RFX1-201ENST00000254325 NUTM2AQ8IVF1 878 aaPredicted RBP18.74■□□□□ 0.59
RFX1-201ENST00000254325 TEX13AQ9BXU3 409 aaPredicted RBP18.74■□□□□ 0.59
RFX1-201ENST00000254325 KIF3AQ9Y496 699 aa18.74■□□□□ 0.59
RFX1-201ENST00000254325 FPGT-TNNI3KV9GXZ4 949 aa18.74■□□□□ 0.59
RFX1-201ENST00000254325 ERVV-2B6SEH9 535 aa18.74■□□□□ 0.59
RFX1-201ENST00000254325 EXOC5O00471 708 aa18.74■□□□□ 0.59
RFX1-201ENST00000254325 PDCP20941 246 aa18.74■□□□□ 0.59
RFX1-201ENST00000254325 SYCE3A1L190 88 aa18.73■□□□□ 0.59
RFX1-201ENST00000254325 ADAMTS2O95450 1211 aa18.73■□□□□ 0.59
RFX1-201ENST00000254325 DBNDD2Q9BQY9 259 aa18.73■□□□□ 0.59
RFX1-201ENST00000254325 TLR7Q9NYK1 1049 aaKnown RBP18.73■□□□□ 0.59
RFX1-201ENST00000254325 ZNF335Q9H4Z2 1342 aaPredicted RBP18.73■□□□□ 0.59
RFX1-201ENST00000254325 SASH1O94885 1247 aa18.73■□□□□ 0.59
RFX1-201ENST00000254325 CREB3L3Q68CJ9 461 aa18.73■□□□□ 0.59
RFX1-201ENST00000254325 NDUFB9Q9Y6M9 179 aa18.73■□□□□ 0.59
RFX1-201ENST00000254325 APPP05067 770 aa18.73■□□□□ 0.59
RFX1-201ENST00000254325 FAM43AQ8N2R8 423 aa18.73■□□□□ 0.59
RFX1-201ENST00000254325 EDC3Q96F86 508 aaKnown RBP18.73■□□□□ 0.59
RFX1-201ENST00000254325 EPB41L2O43491 1005 aaKnown RBP18.73■□□□□ 0.59
RFX1-201ENST00000254325 PTH1RQ03431 593 aa18.73■□□□□ 0.59
RFX1-201ENST00000254325 IFIT5Q13325 482 aaKnown RBP18.73■□□□□ 0.59
RFX1-201ENST00000254325 NECAB1Q8N987 351 aa18.73■□□□□ 0.59
RFX1-201ENST00000254325 STX6O43752 255 aa18.72■□□□□ 0.59
RFX1-201ENST00000254325 GJB2P29033 226 aa18.72■□□□□ 0.59
RFX1-201ENST00000254325 LSG1Q9H089 658 aaKnown RBP18.72■□□□□ 0.59
RFX1-201ENST00000254325 NFAT5O94916 1531 aa18.72■□□□□ 0.59
RFX1-201ENST00000254325 GTF2E1P29083 439 aaPredicted RBP18.72■□□□□ 0.59
RFX1-201ENST00000254325 IL15P40933 162 aaPredicted RBP18.71■□□□□ 0.59
RFX1-201ENST00000254325 EPHA10Q5JZY3 1008 aa18.71■□□□□ 0.59
RFX1-201ENST00000254325 RASEFQ8IZ41 740 aa18.71■□□□□ 0.59
RFX1-201ENST00000254325 SNRKQ9NRH2 765 aa18.71■□□□□ 0.59
RFX1-201ENST00000254325 RGPD1P0DJD0 1748 aa18.71■□□□□ 0.59
RFX1-201ENST00000254325 METTL24Q5JXM2 366 aa18.71■□□□□ 0.59
RFX1-201ENST00000254325 FERMT3Q86UX7 667 aa18.71■□□□□ 0.59
RFX1-201ENST00000254325 SALL3Q9BXA9 1300 aa18.7■□□□□ 0.58
RFX1-201ENST00000254325 TIMM10P62072 90 aa18.7■□□□□ 0.58
RFX1-201ENST00000254325 ZSCAN23Q3MJ62 389 aa18.7■□□□□ 0.58
RFX1-201ENST00000254325 AKAP2Q9Y2D5 859 aa18.7■□□□□ 0.58
RFX1-201ENST00000254325 U3KPZ7 1027 aaPredicted RBP18.7■□□□□ 0.58
RFX1-201ENST00000254325 MST1RQ04912 1400 aa18.7■□□□□ 0.58
RFX1-201ENST00000254325 CHD2O14647 1828 aaKnown RBP18.7■□□□□ 0.58
RFX1-201ENST00000254325 LTN1O94822 1766 aa18.7■□□□□ 0.58
RFX1-201ENST00000254325 CHAMP1Q96JM3 812 aa18.7■□□□□ 0.58
RFX1-201ENST00000254325 CARD10Q9BWT7 1032 aa18.7■□□□□ 0.58
RFX1-201ENST00000254325 ZNF594Q96JF6 807 aaPredicted RBP18.69■□□□□ 0.58
RFX1-201ENST00000254325 COPRSQ9NQ92 184 aa18.69■□□□□ 0.58
RFX1-201ENST00000254325 TRMT112Q9UI30 125 aaKnown RBP18.69■□□□□ 0.58
RFX1-201ENST00000254325 DTNBO60941 627 aa18.69■□□□□ 0.58
RFX1-201ENST00000254325 PDIA6Q15084 440 aa18.69■□□□□ 0.58
RFX1-201ENST00000254325 DNAJC10Q8IXB1 793 aa18.69■□□□□ 0.58
RFX1-201ENST00000254325 CCDC191Q8NCU4 936 aa18.69■□□□□ 0.58
RFX1-201ENST00000254325 ZRSR1Q15695 479 aaKnown RBP18.69■□□□□ 0.58
RFX1-201ENST00000254325 HMG20BQ9P0W2 317 aa18.69■□□□□ 0.58
RFX1-201ENST00000254325 VPS53Q5VIR6 699 aa18.68■□□□□ 0.58
RFX1-201ENST00000254325 CCDC173Q0VFZ6 552 aa18.68■□□□□ 0.58
RFX1-201ENST00000254325 TSPY26PQ9H489 355 aa18.68■□□□□ 0.58
RFX1-201ENST00000254325 A0A0D9SFI3 127 aa18.68■□□□□ 0.58
RFX1-201ENST00000254325 ZSCAN22P10073 491 aaPredicted RBP18.68■□□□□ 0.58
RFX1-201ENST00000254325 RUFY3Q7L099 469 aa18.68■□□□□ 0.58
RFX1-201ENST00000254325 RALYLQ86SE5 291 aaKnown RBP18.68■□□□□ 0.58
RFX1-201ENST00000254325 TOMM22Q9NS69 142 aa18.68■□□□□ 0.58
RFX1-201ENST00000254325 LMBRD1Q9NUN5 540 aa18.68■□□□□ 0.58
RFX1-201ENST00000254325 MCMDC2Q4G0Z9 681 aa18.68■□□□□ 0.58
RFX1-201ENST00000254325 ERBB4Q15303 1308 aa18.67■□□□□ 0.58
RFX1-201ENST00000254325 NWD1Q149M9 1564 aa18.67■□□□□ 0.58
RFX1-201ENST00000254325 HEG1Q9ULI3 1381 aa18.67■□□□□ 0.58
RFX1-201ENST00000254325 FAM89AQ96GI7 184 aa18.67■□□□□ 0.58
RFX1-201ENST00000254325 NCOA3Q9Y6Q9 1424 aa18.67■□□□□ 0.58
RFX1-201ENST00000254325 HSP90AB3PQ58FF7 597 aa18.67■□□□□ 0.58
RFX1-201ENST00000254325 NEK1Q96PY6 1258 aa18.67■□□□□ 0.58
RFX1-201ENST00000254325 TRDNQ13061 729 aa18.67■□□□□ 0.58
RFX1-201ENST00000254325 LDHAL6AQ6ZMR3 332 aa18.67■□□□□ 0.58
RFX1-201ENST00000254325 SLC27A2O14975 620 aa18.66■□□□□ 0.58
RFX1-201ENST00000254325 DDIT3P35638 169 aa18.66■□□□□ 0.58
RFX1-201ENST00000254325 BICD2Q8TD16 824 aa18.66■□□□□ 0.58
RFX1-201ENST00000254325 DDX11Q96FC9 970 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms