RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 FAM200BP0CF97 657 aa8.86□□□□□ -0.99
USP29-201ENST00000254181 GCFC2P16383 781 aaKnown RBP8.86□□□□□ -0.99
USP29-201ENST00000254181 ABCD1P33897 745 aa8.86□□□□□ -0.99
USP29-201ENST00000254181 SF3B2Q13435 895 aaKnown RBP8.86□□□□□ -0.99
USP29-201ENST00000254181 DBN1Q16643 649 aa8.86□□□□□ -0.99
USP29-201ENST00000254181 DZIP1LQ8IYY4 767 aaKnown RBP8.86□□□□□ -0.99
USP29-201ENST00000254181 ENOX1Q8TC92 643 aaKnown RBP8.86□□□□□ -0.99
USP29-201ENST00000254181 PAGR1Q9BTK6 254 aa8.86□□□□□ -0.99
USP29-201ENST00000254181 SKAP2O75563 359 aaPredicted RBP8.85□□□□□ -0.99
USP29-201ENST00000254181 MCM2P49736 904 aa8.85□□□□□ -0.99
USP29-201ENST00000254181 EVCP57679 992 aa8.85□□□□□ -0.99
USP29-201ENST00000254181 NKX1-1Q15270 411 aaPredicted RBP8.85□□□□□ -0.99
USP29-201ENST00000254181 RNF187Q5TA31 235 aaPredicted RBP8.85□□□□□ -0.99
USP29-201ENST00000254181 TRIM74Q86UV6 250 aa8.85□□□□□ -0.99
USP29-201ENST00000254181 TRIM73Q86UV7 250 aa8.85□□□□□ -0.99
USP29-201ENST00000254181 LUZP1Q86V48 1076 aa8.85□□□□□ -0.99
USP29-201ENST00000254181 KLHL23Q8NBE8 558 aa8.85□□□□□ -0.99
USP29-201ENST00000254181 SCLT1Q96NL6 688 aa8.85□□□□□ -0.99
USP29-201ENST00000254181 ZSWIM4Q9H7M6 989 aa8.85□□□□□ -0.99
USP29-201ENST00000254181 HOXA2O43364 376 aa8.85□□□□□ -0.99
USP29-201ENST00000254181 ECEL1O95672 775 aa8.85□□□□□ -0.99
USP29-201ENST00000254181 SSBP05455 408 aaKnown RBP eCLIP8.85□□□□□ -0.99
USP29-201ENST00000254181 RPSAP08865 295 aaKnown RBP8.85□□□□□ -0.99
USP29-201ENST00000254181 CLEC17AQ6ZS10 378 aa8.85□□□□□ -0.99
USP29-201ENST00000254181 CABS1Q96KC9 395 aa8.85□□□□□ -0.99
USP29-201ENST00000254181 KIF9Q9HAQ2 790 aa8.85□□□□□ -0.99
USP29-201ENST00000254181 HMMRO75330 724 aa8.85□□□□□ -0.99
USP29-201ENST00000254181 ERLIN1O75477 346 aa8.85□□□□□ -0.99
USP29-201ENST00000254181 FOXR1Q6PIV2 292 aa8.85□□□□□ -0.99
USP29-201ENST00000254181 TBC1D9Q6ZT07 1266 aa8.85□□□□□ -0.99
USP29-201ENST00000254181 ARL10Q8N8L6 244 aa8.85□□□□□ -0.99
USP29-201ENST00000254181 SMARCC1Q92922 1105 aaPredicted RBP8.85□□□□□ -0.99
USP29-201ENST00000254181 RRP7AQ9Y3A4 280 aaKnown RBP8.85□□□□□ -0.99
USP29-201ENST00000254181 ATP6V1DQ9Y5K8 247 aa8.85□□□□□ -0.99
USP29-201ENST00000254181 ARHGAP35Q9NRY4 1499 aa8.85□□□□□ -0.99
USP29-201ENST00000254181 IPO5O00410 1097 aaKnown RBP8.84□□□□□ -0.99
USP29-201ENST00000254181 RRM1P23921 792 aa8.84□□□□□ -0.99
USP29-201ENST00000254181 EVA1CP58658 441 aa8.84□□□□□ -0.99
USP29-201ENST00000254181 CPLX2Q6PUV4 134 aaKnown RBP8.84□□□□□ -0.99
USP29-201ENST00000254181 IQCA1Q86XH1 822 aa8.84□□□□□ -0.99
USP29-201ENST00000254181 POTEDQ86YR6 584 aa8.84□□□□□ -0.99
USP29-201ENST00000254181 DYDC1Q8WWB3 177 aa8.84□□□□□ -0.99
USP29-201ENST00000254181 CHCHD3Q9NX63 227 aaKnown RBP8.84□□□□□ -0.99
USP29-201ENST00000254181 RABL2BQ9UNT1 228 aa8.84□□□□□ -0.99
USP29-201ENST00000254181 SRGAP3O43295 1099 aa8.84□□□□□ -0.99
USP29-201ENST00000254181 ADCY2Q08462 1091 aa8.84□□□□□ -0.99
USP29-201ENST00000254181 CKAP2LQ8IYA6 745 aa8.84□□□□□ -0.99
USP29-201ENST00000254181 NFATC2IPQ8NCF5 419 aa8.84□□□□□ -0.99
USP29-201ENST00000254181 SYNPO2Q9UMS6 1093 aa8.84□□□□□ -0.99
USP29-201ENST00000254181 TNNQ9UQP3 1299 aa8.84□□□□□ -0.99
USP29-201ENST00000254181 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.84□□□□□ -0.99
USP29-201ENST00000254181 KIRREL3Q8IZU9 778 aa8.84□□□□□ -0.99
USP29-201ENST00000254181 OGFOD1Q8N543 542 aa8.84□□□□□ -0.99
USP29-201ENST00000254181 FAM200AQ8TCP9 573 aa8.84□□□□□ -0.99
USP29-201ENST00000254181 CARD6Q9BX69 1037 aa8.84□□□□□ -0.99
USP29-201ENST00000254181 MYBL2P10244 700 aa8.83□□□□□ -1
USP29-201ENST00000254181 FAM160A1Q05DH4 1040 aa8.83□□□□□ -1
USP29-201ENST00000254181 SCRN1Q12765 414 aa8.83□□□□□ -1
USP29-201ENST00000254181 PDCD2Q16342 344 aaPredicted RBP8.83□□□□□ -1
USP29-201ENST00000254181 NAALADL2Q58DX5 795 aa8.83□□□□□ -1
USP29-201ENST00000254181 SAAL1Q96ER3 474 aa8.83□□□□□ -1
USP29-201ENST00000254181 RSRC1Q96IZ7 334 aaKnown RBP8.83□□□□□ -1
USP29-201ENST00000254181 ATG3Q9NT62 314 aa8.83□□□□□ -1
USP29-201ENST00000254181 WDR33Q9C0J8 1336 aaKnown RBP8.83□□□□□ -1
USP29-201ENST00000254181 SEMA3EO15041 775 aa8.83□□□□□ -1
USP29-201ENST00000254181 NEMFO60524 1076 aa8.83□□□□□ -1
USP29-201ENST00000254181 SNUPNO95149 360 aaKnown RBP8.83□□□□□ -1
USP29-201ENST00000254181 ENOX2Q16206 610 aaKnown RBP8.83□□□□□ -1
USP29-201ENST00000254181 MAP3K11Q16584 847 aa8.83□□□□□ -1
USP29-201ENST00000254181 C4orf46Q504U0 113 aa8.83□□□□□ -1
USP29-201ENST00000254181 CEP85LQ5SZL2 805 aa8.83□□□□□ -1
USP29-201ENST00000254181 CCDC47Q96A33 483 aaKnown RBP8.83□□□□□ -1
USP29-201ENST00000254181 SPDL1Q96EA4 605 aa8.83□□□□□ -1
USP29-201ENST00000254181 MPHOSPH6Q99547 160 aaKnown RBP8.83□□□□□ -1
USP29-201ENST00000254181 RANBP17Q9H2T7 1088 aaKnown RBP8.83□□□□□ -1
USP29-201ENST00000254181 SCRIBQ14160 1630 aa8.83□□□□□ -1
USP29-201ENST00000254181 ANKRD30AQ9BXX3 1397 aa8.83□□□□□ -1
USP29-201ENST00000254181 ARAP1Q96P48 1450 aa8.83□□□□□ -1
USP29-201ENST00000254181 NUTM1Q86Y26 1132 aa8.83□□□□□ -1
USP29-201ENST00000254181 NOC3LQ8WTT2 800 aaKnown RBP8.83□□□□□ -1
USP29-201ENST00000254181 TACO1Q9BSH4 297 aaKnown RBP8.83□□□□□ -1
USP29-201ENST00000254181 PDE11AQ9HCR9 933 aa8.83□□□□□ -1
USP29-201ENST00000254181 NCOA3Q9Y6Q9 1424 aa8.83□□□□□ -1
USP29-201ENST00000254181 PLEKHH2Q8IVE3 1493 aa8.83□□□□□ -1
USP29-201ENST00000254181 CCDC69A6NI79 296 aa8.82□□□□□ -1
USP29-201ENST00000254181 CCT5P48643 541 aa8.82□□□□□ -1
USP29-201ENST00000254181 CACTINQ8WUQ7 758 aaKnown RBP8.82□□□□□ -1
USP29-201ENST00000254181 NAT10Q9H0A0 1025 aaKnown RBP8.82□□□□□ -1
USP29-201ENST00000254181 NUP62CLQ9H1M0 184 aa8.82□□□□□ -1
USP29-201ENST00000254181 TNMDQ9H2S6 317 aa8.82□□□□□ -1
USP29-201ENST00000254181 NKTRP30414 1462 aaKnown RBP8.82□□□□□ -1
USP29-201ENST00000254181 CHUKO15111 745 aa8.82□□□□□ -1
USP29-201ENST00000254181 ACTN3Q08043 901 aaPredicted RBP8.82□□□□□ -1
USP29-201ENST00000254181 SNX1Q13596 522 aa8.82□□□□□ -1
USP29-201ENST00000254181 CNNM3Q8NE01 707 aa8.82□□□□□ -1
USP29-201ENST00000254181 ZSCAN16Q9H4T2 348 aaPredicted RBP8.82□□□□□ -1
USP29-201ENST00000254181 BICC1Q9H694 974 aaKnown RBP8.82□□□□□ -1
USP29-201ENST00000254181 TMEM165Q9HC07 324 aa8.82□□□□□ -1
USP29-201ENST00000254181 GOLGA6L10A6NI86 522 aa8.82□□□□□ -1
USP29-201ENST00000254181 CCNHP51946 323 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms