RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 POTEJP0CG39 1038 aa21.09■□□□□ 0.97
CLPP-201ENST00000245816 VEGFAP15692 232 aaPredicted RBP21.09■□□□□ 0.97
CLPP-201ENST00000245816 APLP1P51693 650 aa21.09■□□□□ 0.97
CLPP-201ENST00000245816 CCDC93Q567U6 631 aa21.09■□□□□ 0.97
CLPP-201ENST00000245816 ZNF428Q96B54 188 aa21.09■□□□□ 0.97
CLPP-201ENST00000245816 FKBP4Q02790 459 aaKnown RBP eCLIP21.08■□□□□ 0.97
CLPP-201ENST00000245816 FSTL1Q12841 308 aa21.08■□□□□ 0.97
CLPP-201ENST00000245816 AIMP1Q12904 312 aaKnown RBP21.08■□□□□ 0.97
CLPP-201ENST00000245816 NYXQ9GZU5 481 aa21.08■□□□□ 0.97
CLPP-201ENST00000245816 DDX21Q9NR30 783 aaKnown RBP eCLIP21.08■□□□□ 0.97
CLPP-201ENST00000245816 MBIPQ9NS73 344 aa21.08■□□□□ 0.97
CLPP-201ENST00000245816 CHPF2Q9P2E5 772 aa21.08■□□□□ 0.97
CLPP-201ENST00000245816 GTF2E1P29083 439 aaPredicted RBP21.07■□□□□ 0.96
CLPP-201ENST00000245816 SLC10A5Q5PT55 438 aa21.07■□□□□ 0.96
CLPP-201ENST00000245816 ZNF541Q9H0D2 1346 aa21.06■□□□□ 0.96
CLPP-201ENST00000245816 NCBP3Q53F19 620 aaKnown RBP21.06■□□□□ 0.96
CLPP-201ENST00000245816 NLRP10Q86W26 655 aa21.06■□□□□ 0.96
CLPP-201ENST00000245816 C16orf71Q8IYS4 520 aaPredicted RBP21.06■□□□□ 0.96
CLPP-201ENST00000245816 CFAP44Q96MT7 982 aa21.06■□□□□ 0.96
CLPP-201ENST00000245816 ALDH1B1P30837 517 aa21.05■□□□□ 0.96
CLPP-201ENST00000245816 SOGA3Q5TF21 947 aa21.05■□□□□ 0.96
CLPP-201ENST00000245816 MRS2Q9HD23 443 aa21.05■□□□□ 0.96
CLPP-201ENST00000245816 ANKRD36CQ5JPF3 1778 aa21.05■□□□□ 0.96
CLPP-201ENST00000245816 COL4A1P02462 1669 aa21.04■□□□□ 0.96
CLPP-201ENST00000245816 LAMB2P55268 1798 aa21.04■□□□□ 0.96
CLPP-201ENST00000245816 TCIRG1Q13488 830 aa21.03■□□□□ 0.96
CLPP-201ENST00000245816 PARP10Q53GL7 1025 aa21.03■□□□□ 0.96
CLPP-201ENST00000245816 DUSP27Q5VZP5 1158 aa21.03■□□□□ 0.96
CLPP-201ENST00000245816 SMC1BQ8NDV3 1235 aa21.03■□□□□ 0.96
CLPP-201ENST00000245816 CRAMP1Q96RY5 1269 aa21.03■□□□□ 0.96
CLPP-201ENST00000245816 PCNTO95613 3336 aa21.03■□□□□ 0.96
CLPP-201ENST00000245816 HCLS1P14317 486 aaPredicted RBP21.02■□□□□ 0.96
CLPP-201ENST00000245816 CALD1Q05682 793 aaKnown RBP21.02■□□□□ 0.96
CLPP-201ENST00000245816 DIEXFQ68CQ4 756 aaKnown RBP21.02■□□□□ 0.96
CLPP-201ENST00000245816 DPY19L2Q6NUT2 758 aa21.02■□□□□ 0.96
CLPP-201ENST00000245816 RTKN2Q8IZC4 609 aa21.02■□□□□ 0.96
CLPP-201ENST00000245816 UTP14AQ9BVJ6 771 aaKnown RBP21.02■□□□□ 0.96
CLPP-201ENST00000245816 FZD9O00144 591 aa21.01■□□□□ 0.95
CLPP-201ENST00000245816 TCERG1O14776 1098 aaKnown RBP21.01■□□□□ 0.95
CLPP-201ENST00000245816 IARSP41252 1262 aaKnown RBP21.01■□□□□ 0.95
CLPP-201ENST00000245816 HDGFL1Q5TGJ6 251 aa21.01■□□□□ 0.95
CLPP-201ENST00000245816 PPP1R42Q7Z4L9 355 aa21.01■□□□□ 0.95
CLPP-201ENST00000245816 C8orf58Q8NAV2 365 aa21.01■□□□□ 0.95
CLPP-201ENST00000245816 PSMD1Q99460 953 aa21.01■□□□□ 0.95
CLPP-201ENST00000245816 TAF1P21675 1872 aa21.01■□□□□ 0.95
CLPP-201ENST00000245816 HOXB7P09629 217 aa21■□□□□ 0.95
CLPP-201ENST00000245816 L3MBTL3Q96JM7 780 aaPredicted RBP21■□□□□ 0.95
CLPP-201ENST00000245816 ISCA1Q9BUE6 129 aa21■□□□□ 0.95
CLPP-201ENST00000245816 ABCC4O15439 1325 aa21■□□□□ 0.95
CLPP-201ENST00000245816 CCDC27Q2M243 656 aa20.99■□□□□ 0.95
CLPP-201ENST00000245816 RPGRQ92834 1020 aaKnown RBP20.99■□□□□ 0.95
CLPP-201ENST00000245816 PHAXQ9H814 394 aaKnown RBP20.99■□□□□ 0.95
CLPP-201ENST00000245816 ELL2O00472 640 aaPredicted RBP20.98■□□□□ 0.95
CLPP-201ENST00000245816 RBM17Q96I25 401 aaKnown RBP20.98■□□□□ 0.95
CLPP-201ENST00000245816 IFT57Q9NWB7 429 aa20.98■□□□□ 0.95
CLPP-201ENST00000245816 LTBP1Q14766 1721 aa20.98■□□□□ 0.95
CLPP-201ENST00000245816 ATP5J2-PTCD1G3V325 749 aa20.97■□□□□ 0.95
CLPP-201ENST00000245816 PPEF1O14829 653 aaPredicted RBP20.97■□□□□ 0.95
CLPP-201ENST00000245816 ANKRD13DQ6ZTN6 518 aa20.97■□□□□ 0.95
CLPP-201ENST00000245816 TSPYL6Q8N831 410 aa20.97■□□□□ 0.95
CLPP-201ENST00000245816 PLBD2Q8NHP8 589 aa20.97■□□□□ 0.95
CLPP-201ENST00000245816 KLRG1Q96E93 195 aa20.97■□□□□ 0.95
CLPP-201ENST00000245816 NLRP3Q96P20 1036 aa20.97■□□□□ 0.95
CLPP-201ENST00000245816 TAF1DQ9H5J8 278 aaPredicted RBP20.97■□□□□ 0.95
CLPP-201ENST00000245816 DDX60Q8IY21 1712 aaKnown RBP20.97■□□□□ 0.95
CLPP-201ENST00000245816 DBF4Q9UBU7 674 aaPredicted RBP20.96■□□□□ 0.95
CLPP-201ENST00000245816 TRMT112Q9UI30 125 aaKnown RBP20.96■□□□□ 0.95
CLPP-201ENST00000245816 ADAMTSL1Q8N6G6 1762 aa20.95■□□□□ 0.94
CLPP-201ENST00000245816 HSP90AB3PQ58FF7 597 aa20.95■□□□□ 0.94
CLPP-201ENST00000245816 JMYQ8N9B5 988 aa20.95■□□□□ 0.94
CLPP-201ENST00000245816 ATP6V0A2Q9Y487 856 aa20.95■□□□□ 0.94
CLPP-201ENST00000245816 GNAI1P63096 354 aa20.94■□□□□ 0.94
CLPP-201ENST00000245816 CC2D2BQ6DHV5 1058 aa20.94■□□□□ 0.94
CLPP-201ENST00000245816 FAM89AQ96GI7 184 aa20.94■□□□□ 0.94
CLPP-201ENST00000245816 SCN4AP35499 1836 aa20.93■□□□□ 0.94
CLPP-201ENST00000245816 CHADLQ6NUI6 762 aa20.93■□□□□ 0.94
CLPP-201ENST00000245816 RNF123Q5XPI4 1314 aa20.93■□□□□ 0.94
CLPP-201ENST00000245816 SH3TC1Q8TE82 1336 aa20.93■□□□□ 0.94
CLPP-201ENST00000245816 ITGBL1O95965 494 aaPredicted RBP20.92■□□□□ 0.94
CLPP-201ENST00000245816 TSR2Q969E8 191 aaKnown RBP20.92■□□□□ 0.94
CLPP-201ENST00000245816 HYPKQ9NX55 129 aa20.92■□□□□ 0.94
CLPP-201ENST00000245816 DUOX1Q9NRD9 1551 aa20.92■□□□□ 0.94
CLPP-201ENST00000245816 TRIM28Q13263 835 aaKnown RBP20.91■□□□□ 0.94
CLPP-201ENST00000245816 PASKQ96RG2 1323 aa20.91■□□□□ 0.94
CLPP-201ENST00000245816 RTFDC1Q9BY42 306 aaPredicted RBP20.91■□□□□ 0.94
CLPP-201ENST00000245816 AOC3Q16853 763 aa20.9■□□□□ 0.94
CLPP-201ENST00000245816 RTL5Q5HYW3 569 aaPredicted RBP20.9■□□□□ 0.94
CLPP-201ENST00000245816 SP8Q8IXZ3 490 aa20.9■□□□□ 0.94
CLPP-201ENST00000245816 CELF1Q92879 486 aaKnown RBP20.9■□□□□ 0.94
CLPP-201ENST00000245816 CHMP4AQ9BY43 222 aa20.9■□□□□ 0.94
CLPP-201ENST00000245816 IL16Q14005 1332 aa20.89■□□□□ 0.93
CLPP-201ENST00000245816 SCNN1DP51172 638 aa20.89■□□□□ 0.93
CLPP-201ENST00000245816 GRAPQ13588 217 aa20.89■□□□□ 0.93
CLPP-201ENST00000245816 WWC1Q8IX03 1113 aa20.89■□□□□ 0.93
CLPP-201ENST00000245816 GPC2Q8N158 579 aa20.89■□□□□ 0.93
CLPP-201ENST00000245816 GRAPLQ8TC17 118 aaPredicted RBP20.89■□□□□ 0.93
CLPP-201ENST00000245816 JARID2Q92833 1246 aaPredicted RBP20.89■□□□□ 0.93
CLPP-201ENST00000245816 BBOX1O75936 387 aa20.88■□□□□ 0.93
CLPP-201ENST00000245816 EPHX2P34913 555 aa20.88■□□□□ 0.93
CLPP-201ENST00000245816 SF3B3Q15393 1217 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms