RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 SHROOM2Q13796 1616 aa13.59□□□□□ -0.23
SOX9-201ENST00000245479 A1BGP04217 495 aa13.59□□□□□ -0.23
SOX9-201ENST00000245479 CWC15Q9P013 229 aaKnown RBP13.59□□□□□ -0.23
SOX9-201ENST00000245479 HSP90AB4PQ58FF6 505 aa13.58□□□□□ -0.23
SOX9-201ENST00000245479 RRP12Q5JTH9 1297 aaKnown RBP13.58□□□□□ -0.23
SOX9-201ENST00000245479 MAP3K5Q99683 1374 aa13.58□□□□□ -0.24
SOX9-201ENST00000245479 LARGE1O95461 756 aa13.58□□□□□ -0.24
SOX9-201ENST00000245479 ALKQ9UM73 1620 aa13.58□□□□□ -0.24
SOX9-201ENST00000245479 GRM8O00222 908 aa13.58□□□□□ -0.24
SOX9-201ENST00000245479 HELBQ8NG08 1087 aaPredicted RBP13.58□□□□□ -0.24
SOX9-201ENST00000245479 PIBF1Q8WXW3 757 aa13.58□□□□□ -0.24
SOX9-201ENST00000245479 AK9Q5TCS8 1911 aa13.58□□□□□ -0.24
SOX9-201ENST00000245479 RNMTO43148 476 aaKnown RBP13.58□□□□□ -0.24
SOX9-201ENST00000245479 STX6O43752 255 aa13.58□□□□□ -0.24
SOX9-201ENST00000245479 DMTNQ08495 405 aa13.58□□□□□ -0.24
SOX9-201ENST00000245479 ANKRD13DQ6ZTN6 518 aa13.58□□□□□ -0.24
SOX9-201ENST00000245479 EAF2Q96CJ1 260 aaPredicted RBP13.58□□□□□ -0.24
SOX9-201ENST00000245479 SRCAPQ6ZRS2 3230 aa13.57□□□□□ -0.24
SOX9-201ENST00000245479 PNPLA6Q8IY17 1366 aa13.57□□□□□ -0.24
SOX9-201ENST00000245479 TFCP2Q12800 502 aa13.57□□□□□ -0.24
SOX9-201ENST00000245479 KRT222Q8N1A0 295 aa13.57□□□□□ -0.24
SOX9-201ENST00000245479 SDF4Q9BRK5 362 aa13.57□□□□□ -0.24
SOX9-201ENST00000245479 TRMT1Q9NXH9 659 aaKnown RBP13.57□□□□□ -0.24
SOX9-201ENST00000245479 SYT1P21579 422 aa13.57□□□□□ -0.24
SOX9-201ENST00000245479 GTF2F1P35269 517 aaKnown RBP eCLIP13.57□□□□□ -0.243e-7■■■■□ 25
SOX9-201ENST00000245479 NOM1Q5C9Z4 860 aaKnown RBP13.57□□□□□ -0.24
SOX9-201ENST00000245479 IP6K1Q92551 441 aa13.57□□□□□ -0.24
SOX9-201ENST00000245479 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.57□□□□□ -0.24
SOX9-201ENST00000245479 SNX14Q9Y5W7 946 aa13.57□□□□□ -0.24
SOX9-201ENST00000245479 V9GYY5 206 aaPredicted RBP13.57□□□□□ -0.24
SOX9-201ENST00000245479 INO80Q9ULG1 1556 aaPredicted RBP13.57□□□□□ -0.24
SOX9-201ENST00000245479 NUTM2BA6NNL0 878 aaPredicted RBP13.57□□□□□ -0.24
SOX9-201ENST00000245479 NUTM2EB1AL46 878 aaPredicted RBP13.57□□□□□ -0.24
SOX9-201ENST00000245479 RIOK3O14730 519 aaKnown RBP13.57□□□□□ -0.24
SOX9-201ENST00000245479 RXRAP19793 462 aa13.57□□□□□ -0.24
SOX9-201ENST00000245479 NUTM2AQ8IVF1 878 aaPredicted RBP13.57□□□□□ -0.24
SOX9-201ENST00000245479 BCL2L12Q9HB09 334 aa13.57□□□□□ -0.24
SOX9-201ENST00000245479 LIMCH1Q9UPQ0 1083 aa13.57□□□□□ -0.24
SOX9-201ENST00000245479 CD163L1Q9NR16 1453 aa13.56□□□□□ -0.24
SOX9-201ENST00000245479 TBX22Q9Y458 520 aa13.56□□□□□ -0.24
SOX9-201ENST00000245479 IQSEC2Q5JU85 1478 aa13.56□□□□□ -0.24
SOX9-201ENST00000245479 POLR3GO15318 223 aaPredicted RBP13.56□□□□□ -0.24
SOX9-201ENST00000245479 SMC2O95347 1197 aa13.56□□□□□ -0.24
SOX9-201ENST00000245479 PDCP20941 246 aa13.56□□□□□ -0.24
SOX9-201ENST00000245479 CCDC186Q7Z3E2 898 aa13.56□□□□□ -0.24
SOX9-201ENST00000245479 BRF1Q92994 677 aa13.56□□□□□ -0.24
SOX9-201ENST00000245479 OTUD7BQ6GQQ9 843 aa13.56□□□□□ -0.24
SOX9-201ENST00000245479 DBNDD2Q9BQY9 259 aa13.56□□□□□ -0.24
SOX9-201ENST00000245479 ZDHHC9Q9Y397 364 aa13.56□□□□□ -0.24
SOX9-201ENST00000245479 KSR2Q6VAB6 950 aa13.55□□□□□ -0.24
SOX9-201ENST00000245479 KCNH5Q8NCM2 988 aa13.55□□□□□ -0.24
SOX9-201ENST00000245479 NEO1Q92859 1461 aa13.55□□□□□ -0.24
SOX9-201ENST00000245479 NEXMIFQ5QGS0 1516 aa13.55□□□□□ -0.24
SOX9-201ENST00000245479 ABCA9Q8IUA7 1624 aa13.55□□□□□ -0.24
SOX9-201ENST00000245479 HSP90AA4PQ58FG1 418 aa13.55□□□□□ -0.24
SOX9-201ENST00000245479 BICDL1Q6ZP65 573 aa13.55□□□□□ -0.24
SOX9-201ENST00000245479 FEZ1Q99689 392 aa13.55□□□□□ -0.24
SOX9-201ENST00000245479 NCOA5Q9HCD5 579 aaKnown RBP13.55□□□□□ -0.24
SOX9-201ENST00000245479 ARHGEF40Q8TER5 1519 aa13.55□□□□□ -0.24
SOX9-201ENST00000245479 UBE2HP62256 183 aa13.55□□□□□ -0.24
SOX9-201ENST00000245479 RNF20Q5VTR2 975 aa13.55□□□□□ -0.24
SOX9-201ENST00000245479 KIF18AQ8NI77 898 aa13.55□□□□□ -0.24
SOX9-201ENST00000245479 CLIP2Q9UDT6 1046 aa13.55□□□□□ -0.24
SOX9-201ENST00000245479 SBNO1A3KN83 1393 aa13.55□□□□□ -0.24
SOX9-201ENST00000245479 TTC21AQ8NDW8 1320 aa13.54□□□□□ -0.24
SOX9-201ENST00000245479 FRMPD1Q5SYB0 1578 aa13.54□□□□□ -0.24
SOX9-201ENST00000245479 IDH1O75874 414 aaKnown RBP13.54□□□□□ -0.24
SOX9-201ENST00000245479 MYOM1P52179 1685 aa13.54□□□□□ -0.24
SOX9-201ENST00000245479 JAK2O60674 1132 aa13.54□□□□□ -0.24
SOX9-201ENST00000245479 KINO60870 393 aaKnown RBP13.54□□□□□ -0.24
SOX9-201ENST00000245479 ADAMTS2O95450 1211 aa13.54□□□□□ -0.24
SOX9-201ENST00000245479 POLR3DP05423 398 aaPredicted RBP13.54□□□□□ -0.24
SOX9-201ENST00000245479 GTF2E1P29083 439 aaPredicted RBP13.54□□□□□ -0.24
SOX9-201ENST00000245479 COL9A3Q14050 684 aaPredicted RBP13.54□□□□□ -0.24
SOX9-201ENST00000245479 FAM177A1Q8N128 213 aaPredicted RBP13.54□□□□□ -0.24
SOX9-201ENST00000245479 UBXN4Q92575 508 aa13.54□□□□□ -0.24
SOX9-201ENST00000245479 OGFRQ9NZT2 677 aa13.54□□□□□ -0.24
SOX9-201ENST00000245479 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.54□□□□□ -0.24
SOX9-201ENST00000245479 USP6P35125 1406 aa13.54□□□□□ -0.24
SOX9-201ENST00000245479 A0A0D9SFI3 127 aa13.54□□□□□ -0.24
SOX9-201ENST00000245479 CPLX1O14810 134 aa13.54□□□□□ -0.24
SOX9-201ENST00000245479 SPATA32Q96LK8 384 aa13.54□□□□□ -0.24
SOX9-201ENST00000245479 TAF6LQ9Y6J9 622 aa13.54□□□□□ -0.24
SOX9-201ENST00000245479 MROH1Q8NDA8 1641 aa13.53□□□□□ -0.24
SOX9-201ENST00000245479 AKAP4Q5JQC9 854 aa13.53□□□□□ -0.24
SOX9-201ENST00000245479 BEND3Q5T5X7 828 aa13.53□□□□□ -0.24
SOX9-201ENST00000245479 FAM89AQ96GI7 184 aa13.53□□□□□ -0.24
SOX9-201ENST00000245479 BIN1O00499 593 aa13.53□□□□□ -0.24
SOX9-201ENST00000245479 GIGYF1O75420 1035 aaPredicted RBP13.53□□□□□ -0.24
SOX9-201ENST00000245479 SKIDA1Q1XH10 827 aa13.53□□□□□ -0.24
SOX9-201ENST00000245479 EPHA10Q5JZY3 1008 aa13.53□□□□□ -0.24
SOX9-201ENST00000245479 ZNF790Q6PG37 636 aa13.53□□□□□ -0.24
SOX9-201ENST00000245479 LARP1Q6PKG0 1096 aaKnown RBP13.53□□□□□ -0.24
SOX9-201ENST00000245479 NAT10Q9H0A0 1025 aaKnown RBP13.53□□□□□ -0.24
SOX9-201ENST00000245479 PTGS1P23219 599 aa13.52□□□□□ -0.24
SOX9-201ENST00000245479 HSP90B2PQ58FF3 399 aa13.52□□□□□ -0.24
SOX9-201ENST00000245479 TMCO3Q6UWJ1 677 aa13.52□□□□□ -0.24
SOX9-201ENST00000245479 NOL10Q9BSC4 688 aaKnown RBP13.52□□□□□ -0.24
SOX9-201ENST00000245479 SGSM2O43147 1006 aa13.52□□□□□ -0.25
SOX9-201ENST00000245479 UTP14CQ5TAP6 766 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms