RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 NLRP5P59047 1200 aa8.54□□□□□ -1.04
MED28-201ENST00000237380 STK32BQ9NY57 414 aa8.54□□□□□ -1.04
MED28-201ENST00000237380 LRRFIP2Q9Y608 721 aaKnown RBP8.54□□□□□ -1.04
MED28-201ENST00000237380 KIF4BQ2VIQ3 1234 aa8.53□□□□□ -1.04
MED28-201ENST00000237380 FAM107BQ9H098 131 aa8.53□□□□□ -1.04
MED28-201ENST00000237380 NEK4P51957 841 aa8.53□□□□□ -1.04
MED28-201ENST00000237380 GOLGA1Q92805 767 aa8.53□□□□□ -1.04
MED28-201ENST00000237380 C6orf50Q9HD87 102 aa8.53□□□□□ -1.04
MED28-201ENST00000237380 PICK1Q9NRD5 415 aa8.53□□□□□ -1.04
MED28-201ENST00000237380 IBSPP21815 317 aaPredicted RBP8.53□□□□□ -1.04
MED28-201ENST00000237380 KIAA0586Q9BVV6 1533 aa8.53□□□□□ -1.04
MED28-201ENST00000237380 NR1I2O75469 434 aa8.53□□□□□ -1.04
MED28-201ENST00000237380 OTUD7BQ6GQQ9 843 aa8.53□□□□□ -1.04
MED28-201ENST00000237380 PDRG1Q9NUG6 133 aa8.53□□□□□ -1.04
MED28-201ENST00000237380 ARAP1Q96P48 1450 aa8.53□□□□□ -1.04
MED28-201ENST00000237380 CEP112Q8N8E3 955 aa8.53□□□□□ -1.04
MED28-201ENST00000237380 MINDY4BA8MYZ0 360 aa8.53□□□□□ -1.04
MED28-201ENST00000237380 POTEB2H3BUK9 544 aa8.53□□□□□ -1.04
MED28-201ENST00000237380 ATP2A1O14983 1001 aa8.53□□□□□ -1.04
MED28-201ENST00000237380 MPRIPQ6WCQ1 1025 aa8.53□□□□□ -1.04
MED28-201ENST00000237380 MICALCLQ6ZW33 695 aa8.53□□□□□ -1.04
MED28-201ENST00000237380 JAKMIP2Q96AA8 810 aa8.53□□□□□ -1.04
MED28-201ENST00000237380 RTCBQ9Y3I0 505 aaKnown RBP8.53□□□□□ -1.04
MED28-201ENST00000237380 CAVIN2O95810 425 aa8.53□□□□□ -1.04
MED28-201ENST00000237380 NOD1Q9Y239 953 aa8.53□□□□□ -1.04
MED28-201ENST00000237380 M0QZ92 97 aa8.52□□□□□ -1.04
MED28-201ENST00000237380 MRE11P49959 708 aa8.52□□□□□ -1.04
MED28-201ENST00000237380 SHTN1A0MZ66 631 aa8.52□□□□□ -1.04
MED28-201ENST00000237380 NASPP49321 788 aaPredicted RBP8.52□□□□□ -1.04
MED28-201ENST00000237380 RBM25P49756 843 aaKnown RBP8.52□□□□□ -1.04
MED28-201ENST00000237380 RNF216Q9NWF9 866 aaPredicted RBP8.52□□□□□ -1.04
MED28-201ENST00000237380 USP25Q9UHP3 1055 aa8.52□□□□□ -1.04
MED28-201ENST00000237380 WDR7Q9Y4E6 1490 aa8.52□□□□□ -1.05
MED28-201ENST00000237380 KRT13P13646 458 aa8.52□□□□□ -1.05
MED28-201ENST00000237380 KIF11P52732 1056 aa8.52□□□□□ -1.05
MED28-201ENST00000237380 NFKBIBQ15653 356 aa8.52□□□□□ -1.05
MED28-201ENST00000237380 ARHGAP29Q52LW3 1261 aa8.52□□□□□ -1.05
MED28-201ENST00000237380 CABP1Q9NZU7 370 aa8.52□□□□□ -1.05
MED28-201ENST00000237380 RAD54L2Q9Y4B4 1467 aa8.52□□□□□ -1.05
MED28-201ENST00000237380 BIVM-ERCC5R4GMW8 1640 aa8.52□□□□□ -1.05
MED28-201ENST00000237380 PABPC4Q13310 644 aaKnown RBP eCLIP8.52□□□□□ -1.054e-8■□□□□ 9.3
MED28-201ENST00000237380 ALDH1L2Q3SY69 923 aa8.52□□□□□ -1.05
MED28-201ENST00000237380 TPTE2Q6XPS3 522 aa8.52□□□□□ -1.05
MED28-201ENST00000237380 UPF3BQ9BZI7 483 aaKnown RBP8.52□□□□□ -1.05
MED28-201ENST00000237380 STMN4Q9H169 189 aaPredicted RBP8.52□□□□□ -1.05
MED28-201ENST00000237380 TUBB4BP68371 445 aa8.52□□□□□ -1.05
MED28-201ENST00000237380 DNAAF4Q8WXU2 420 aa8.52□□□□□ -1.05
MED28-201ENST00000237380 KIF5CO60282 957 aa8.52□□□□□ -1.05
MED28-201ENST00000237380 CDC37L1Q7L3B6 337 aa8.52□□□□□ -1.05
MED28-201ENST00000237380 LRRC59Q96AG4 307 aaKnown RBP8.52□□□□□ -1.05
MED28-201ENST00000237380 ZC3H12CQ9C0D7 883 aaKnown RBP8.52□□□□□ -1.05
MED28-201ENST00000237380 TOPBP1Q92547 1522 aa8.51□□□□□ -1.05
MED28-201ENST00000237380 UQCRHLA0A096LP55 91 aa8.51□□□□□ -1.05
MED28-201ENST00000237380 SPDYE3A6NKU9 549 aa8.51□□□□□ -1.05
MED28-201ENST00000237380 HMG20BQ9P0W2 317 aa8.51□□□□□ -1.05
MED28-201ENST00000237380 PHF8Q9UPP1 1060 aa8.51□□□□□ -1.05
MED28-201ENST00000237380 CCDC175P0C221 793 aa8.51□□□□□ -1.05
MED28-201ENST00000237380 KRT28Q7Z3Y7 464 aa8.51□□□□□ -1.05
MED28-201ENST00000237380 RBM17Q96I25 401 aaKnown RBP8.51□□□□□ -1.05
MED28-201ENST00000237380 ZNF354CQ86Y25 554 aa8.51□□□□□ -1.05
MED28-201ENST00000237380 DPY19L2Q6NUT2 758 aa8.51□□□□□ -1.05
MED28-201ENST00000237380 PDCL2Q8N4E4 241 aa8.51□□□□□ -1.05
MED28-201ENST00000237380 NCAPGQ9BPX3 1015 aa8.51□□□□□ -1.05
MED28-201ENST00000237380 CRACR2AQ9BSW2 395 aa8.51□□□□□ -1.05
MED28-201ENST00000237380 IVNS1ABPQ9Y6Y0 642 aa8.51□□□□□ -1.05
MED28-201ENST00000237380 SIL1Q9H173 461 aa8.51□□□□□ -1.05
MED28-201ENST00000237380 TPCN1Q9ULQ1 816 aa8.51□□□□□ -1.05
MED28-201ENST00000237380 PPP1R2P41236 205 aa8.51□□□□□ -1.05
MED28-201ENST00000237380 SCAND2PQ9GZW5 306 aaPredicted RBP8.51□□□□□ -1.05
MED28-201ENST00000237380 TSPY2A6NKD2 308 aa8.51□□□□□ -1.05
MED28-201ENST00000237380 RIOK3O14730 519 aaKnown RBP8.51□□□□□ -1.05
MED28-201ENST00000237380 PHACTR2O75167 634 aa8.51□□□□□ -1.05
MED28-201ENST00000237380 YEATS4O95619 227 aa8.51□□□□□ -1.05
MED28-201ENST00000237380 TSPY3P0CV98 308 aa8.51□□□□□ -1.05
MED28-201ENST00000237380 TSPY8P0CW00 308 aa8.51□□□□□ -1.05
MED28-201ENST00000237380 EIF2AK4Q9P2K8 1649 aaKnown RBP8.51□□□□□ -1.05
MED28-201ENST00000237380 AFAP1Q8N556 730 aa8.5□□□□□ -1.05
MED28-201ENST00000237380 ATP2A2P16615 1042 aaKnown RBP8.5□□□□□ -1.05
MED28-201ENST00000237380 TCP11L2Q8N4U5 519 aa8.5□□□□□ -1.05
MED28-201ENST00000237380 ANO10Q9NW15 660 aa8.5□□□□□ -1.05
MED28-201ENST00000237380 RANBP6O60518 1105 aaKnown RBP8.5□□□□□ -1.05
MED28-201ENST00000237380 FAM43AQ8N2R8 423 aa8.5□□□□□ -1.05
MED28-201ENST00000237380 SOS1Q07889 1333 aaPredicted RBP8.5□□□□□ -1.05
MED28-201ENST00000237380 TMEM132EQ6IEE7 984 aa8.5□□□□□ -1.05
MED28-201ENST00000237380 MFSD6Q6ZSS7 791 aa8.5□□□□□ -1.05
MED28-201ENST00000237380 DHX29Q7Z478 1369 aaKnown RBP8.5□□□□□ -1.05
MED28-201ENST00000237380 CD2APQ9Y5K6 639 aa8.5□□□□□ -1.05
MED28-201ENST00000237380 RUSC2Q8N2Y8 1516 aa8.5□□□□□ -1.05
MED28-201ENST00000237380 SNRPA1P09661 255 aaKnown RBP8.5□□□□□ -1.05
MED28-201ENST00000237380 CTAGE1Q96RT6 745 aa8.5□□□□□ -1.05
MED28-201ENST00000237380 RASAL2Q9UJF2 1139 aa8.5□□□□□ -1.05
MED28-201ENST00000237380 ZC3H6P61129 1189 aaKnown RBP8.5□□□□□ -1.05
MED28-201ENST00000237380 C8orf76Q96K31 380 aa8.5□□□□□ -1.05
MED28-201ENST00000237380 LUZP1Q86V48 1076 aa8.49□□□□□ -1.05
MED28-201ENST00000237380 GMNNO75496 209 aa8.49□□□□□ -1.05
MED28-201ENST00000237380 EVI5LQ96CN4 794 aa8.49□□□□□ -1.05
MED28-201ENST00000237380 MKRN1Q9UHC7 482 aaKnown RBP8.49□□□□□ -1.05
MED28-201ENST00000237380 IFFO1Q0D2I5 559 aa8.49□□□□□ -1.05
MED28-201ENST00000237380 DDB1Q16531 1140 aa8.49□□□□□ -1.05
MED28-201ENST00000237380 SELENOOQ9BVL4 669 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms