RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 NF2P35240 595 aa8.31□□□□□ -1.08
CPS1-201ENST00000233072 PRPHP41219 470 aa8.31□□□□□ -1.08
CPS1-201ENST00000233072 HDAC1Q13547 482 aaPredicted RBP8.31□□□□□ -1.08
CPS1-201ENST00000233072 DDX46Q7L014 1031 aaKnown RBP8.31□□□□□ -1.08
CPS1-201ENST00000233072 NME9Q86XW9 330 aa8.31□□□□□ -1.08
CPS1-201ENST00000233072 NAP1L4Q99733 375 aaKnown RBP8.31□□□□□ -1.08
CPS1-201ENST00000233072 BOLA2Q9H3K6 86 aa8.31□□□□□ -1.08
CPS1-201ENST00000233072 MAP3K2Q9Y2U5 619 aa8.31□□□□□ -1.08
CPS1-201ENST00000233072 MSH6P52701 1360 aa8.31□□□□□ -1.08
CPS1-201ENST00000233072 MFSD6Q6ZSS7 791 aa8.3□□□□□ -1.08
CPS1-201ENST00000233072 IARSP41252 1262 aaKnown RBP8.3□□□□□ -1.08
CPS1-201ENST00000233072 GNAQP50148 359 aa8.3□□□□□ -1.08
CPS1-201ENST00000233072 ARHGEF12Q9NZN5 1544 aa8.3□□□□□ -1.08
CPS1-201ENST00000233072 MYO1BO43795 1136 aa8.3□□□□□ -1.08
CPS1-201ENST00000233072 ZC3H6P61129 1189 aaKnown RBP8.3□□□□□ -1.08
CPS1-201ENST00000233072 BBXQ8WY36 941 aaPredicted RBP8.3□□□□□ -1.08
CPS1-201ENST00000233072 TCOF1Q13428 1488 aaKnown RBP8.3□□□□□ -1.08
CPS1-201ENST00000233072 PLCH2O75038 1416 aa8.3□□□□□ -1.08
CPS1-201ENST00000233072 CALM1P0DP23 149 aa8.3□□□□□ -1.08
CPS1-201ENST00000233072 CALM2P0DP24 149 aa8.3□□□□□ -1.08
CPS1-201ENST00000233072 CALM3P0DP25 149 aa8.3□□□□□ -1.08
CPS1-201ENST00000233072 METAP2P50579 478 aaKnown RBP eCLIP8.3□□□□□ -1.08
CPS1-201ENST00000233072 TMEM67Q5HYA8 995 aa8.3□□□□□ -1.08
CPS1-201ENST00000233072 FSIP1Q8NA03 581 aa8.3□□□□□ -1.08
CPS1-201ENST00000233072 SPINK5Q9NQ38 1064 aaPredicted RBP8.3□□□□□ -1.08
CPS1-201ENST00000233072 GNAT2P19087 354 aa8.3□□□□□ -1.08
CPS1-201ENST00000233072 GJB2P29033 226 aa8.3□□□□□ -1.08
CPS1-201ENST00000233072 UBE2HP62256 183 aa8.3□□□□□ -1.08
CPS1-201ENST00000233072 TUBB4BP68371 445 aa8.3□□□□□ -1.08
CPS1-201ENST00000233072 IFFO1Q0D2I5 559 aa8.3□□□□□ -1.08
CPS1-201ENST00000233072 BICRAQ9NZM4 1560 aa8.29□□□□□ -1.08
CPS1-201ENST00000233072 KIF4BQ2VIQ3 1234 aa8.29□□□□□ -1.08
CPS1-201ENST00000233072 FMNL3Q8IVF7 1028 aa8.29□□□□□ -1.08
CPS1-201ENST00000233072 FAM177A1Q8N128 213 aaPredicted RBP8.29□□□□□ -1.08
CPS1-201ENST00000233072 ANKRD24Q8TF21 1146 aa8.29□□□□□ -1.08
CPS1-201ENST00000233072 SMARCC1Q92922 1105 aaPredicted RBP8.29□□□□□ -1.08
CPS1-201ENST00000233072 NEK1Q96PY6 1258 aa8.29□□□□□ -1.08
CPS1-201ENST00000233072 MTIF2P46199 727 aaKnown RBP8.29□□□□□ -1.08
CPS1-201ENST00000233072 CAMK4Q16566 473 aa8.29□□□□□ -1.08
CPS1-201ENST00000233072 CCDC40Q4G0X9 1142 aa8.29□□□□□ -1.08
CPS1-201ENST00000233072 KRT28Q7Z3Y7 464 aa8.29□□□□□ -1.08
CPS1-201ENST00000233072 SREK1Q8WXA9 508 aaKnown RBP8.29□□□□□ -1.08
CPS1-201ENST00000233072 PLVAPQ9BX97 442 aa8.29□□□□□ -1.08
CPS1-201ENST00000233072 PAXBP1Q9Y5B6 917 aa8.29□□□□□ -1.08
CPS1-201ENST00000233072 STX6O43752 255 aa8.29□□□□□ -1.08
CPS1-201ENST00000233072 SPAG1Q07617 926 aa8.29□□□□□ -1.08
CPS1-201ENST00000233072 TBC1D5Q92609 795 aa8.29□□□□□ -1.08
CPS1-201ENST00000233072 NYXQ9GZU5 481 aa8.29□□□□□ -1.08
CPS1-201ENST00000233072 EXOC1Q9NV70 894 aa8.29□□□□□ -1.08
CPS1-201ENST00000233072 UHRF1BP1LA0JNW5 1464 aa8.29□□□□□ -1.08
CPS1-201ENST00000233072 SMARCA5O60264 1052 aaPredicted RBP8.29□□□□□ -1.08
CPS1-201ENST00000233072 PPM1EQ8WY54 764 aa8.29□□□□□ -1.08
CPS1-201ENST00000233072 TSNARE1Q96NA8 513 aa8.29□□□□□ -1.08
CPS1-201ENST00000233072 PPIP5K1Q6PFW1 1433 aa8.29□□□□□ -1.08
CPS1-201ENST00000233072 TBCAO75347 108 aaKnown RBP8.28□□□□□ -1.08
CPS1-201ENST00000233072 HDAC9Q9UKV0 1011 aa8.28□□□□□ -1.08
CPS1-201ENST00000233072 A2MP01023 1474 aa8.28□□□□□ -1.08
CPS1-201ENST00000233072 B4DLN1 442 aa8.28□□□□□ -1.08
CPS1-201ENST00000233072 MRPL12P52815 198 aaKnown RBP8.28□□□□□ -1.08
CPS1-201ENST00000233072 KCNG4Q8TDN1 519 aa8.28□□□□□ -1.08
CPS1-201ENST00000233072 PIP4K2BP78356 416 aa8.28□□□□□ -1.08
CPS1-201ENST00000233072 WAPLQ7Z5K2 1190 aa8.28□□□□□ -1.08
CPS1-201ENST00000233072 RAD50Q92878 1312 aa8.28□□□□□ -1.08
CPS1-201ENST00000233072 ABCC1P33527 1531 aa8.28□□□□□ -1.08
CPS1-201ENST00000233072 GPATCH8Q9UKJ3 1502 aaKnown RBP8.28□□□□□ -1.08
CPS1-201ENST00000233072 CCDC102BQ68D86 513 aa8.28□□□□□ -1.08
CPS1-201ENST00000233072 UBA5Q9GZZ9 404 aa8.28□□□□□ -1.08
CPS1-201ENST00000233072 STMN4Q9H169 189 aaPredicted RBP8.28□□□□□ -1.08
CPS1-201ENST00000233072 RASAL2Q9UJF2 1139 aa8.28□□□□□ -1.08
CPS1-201ENST00000233072 TTC41PQ6P2S7 1318 aa8.28□□□□□ -1.08
CPS1-201ENST00000233072 NUCB1Q02818 461 aa8.28□□□□□ -1.08
CPS1-201ENST00000233072 CADPS2Q86UW7 1296 aa8.28□□□□□ -1.08
CPS1-201ENST00000233072 ADGRF5Q8IZF2 1346 aa8.28□□□□□ -1.08
CPS1-201ENST00000233072 WDR7Q9Y4E6 1490 aa8.27□□□□□ -1.08
CPS1-201ENST00000233072 NBPF7P0C2Y1 421 aaPredicted RBP8.27□□□□□ -1.08
CPS1-201ENST00000233072 BRPF3Q9ULD4 1205 aa8.27□□□□□ -1.08
CPS1-201ENST00000233072 KIAA0556O60303 1618 aa8.27□□□□□ -1.09
CPS1-201ENST00000233072 TRIM27P14373 513 aa8.27□□□□□ -1.09
CPS1-201ENST00000233072 TDRD12Q587J7 1177 aaKnown RBP8.27□□□□□ -1.09
CPS1-201ENST00000233072 SPECC1LQ69YQ0 1117 aa8.27□□□□□ -1.09
CPS1-201ENST00000233072 ZNF804AQ7Z570 1209 aa8.27□□□□□ -1.09
CPS1-201ENST00000233072 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.27□□□□□ -1.09
CPS1-201ENST00000233072 MBIPQ9NS73 344 aa8.27□□□□□ -1.09
CPS1-201ENST00000233072 USP16Q9Y5T5 823 aa8.27□□□□□ -1.09
CPS1-201ENST00000233072 DISP3Q9P2K9 1392 aa8.27□□□□□ -1.09
CPS1-201ENST00000233072 RIMS2Q9UQ26 1411 aa8.27□□□□□ -1.09
CPS1-201ENST00000233072 PRKCSHP14314 528 aaPredicted RBP8.27□□□□□ -1.09
CPS1-201ENST00000233072 AKAP4Q5JQC9 854 aa8.27□□□□□ -1.09
CPS1-201ENST00000233072 PIBF1Q8WXW3 757 aa8.27□□□□□ -1.09
CPS1-201ENST00000233072 CCDC8Q9H0W5 538 aaPredicted RBP8.27□□□□□ -1.09
CPS1-201ENST00000233072 EMILIN1Q9Y6C2 1016 aa8.27□□□□□ -1.09
CPS1-201ENST00000233072 CFAP74Q9C0B2 1584 aa8.27□□□□□ -1.09
CPS1-201ENST00000233072 GSTTP1A0A1W2PQM5 241 aa8.27□□□□□ -1.09
CPS1-201ENST00000233072 CTNNA2P26232 953 aa8.27□□□□□ -1.09
CPS1-201ENST00000233072 PRIMPOLQ96LW4 560 aa8.27□□□□□ -1.09
CPS1-201ENST00000233072 CALCOCO1Q9P1Z2 691 aa8.27□□□□□ -1.09
CPS1-201ENST00000233072 POLR3AO14802 1390 aaPredicted RBP8.27□□□□□ -1.09
CPS1-201ENST00000233072 PABPN1LA6NDY0 278 aaKnown RBP8.27□□□□□ -1.09
CPS1-201ENST00000233072 TSPY2A6NKD2 308 aa8.27□□□□□ -1.09
CPS1-201ENST00000233072 RBM10P98175 930 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms