RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 ARFGEF1Q9Y6D6 1849 aa13.29□□□□□ -0.28
CDCA3-201ENST00000229265 CAMTA2O94983 1202 aa13.29□□□□□ -0.28
CDCA3-201ENST00000229265 FLIIQ13045 1269 aa13.29□□□□□ -0.28
CDCA3-201ENST00000229265 KRT24Q2M2I5 525 aa13.29□□□□□ -0.28
CDCA3-201ENST00000229265 UPF2Q9HAU5 1272 aaKnown RBP13.29□□□□□ -0.28
CDCA3-201ENST00000229265 DBF4Q9UBU7 674 aaPredicted RBP13.29□□□□□ -0.28
CDCA3-201ENST00000229265 NARFQ9UHQ1 456 aa13.29□□□□□ -0.28
CDCA3-201ENST00000229265 TNRC6CQ9HCJ0 1690 aaKnown RBP13.28□□□□□ -0.28
CDCA3-201ENST00000229265 SBF1O95248 1867 aa13.28□□□□□ -0.28
CDCA3-201ENST00000229265 CACNA1SQ13698 1873 aa13.28□□□□□ -0.28
CDCA3-201ENST00000229265 BICDL1Q6ZP65 573 aa13.28□□□□□ -0.28
CDCA3-201ENST00000229265 VSIG10Q8N0Z9 540 aa13.28□□□□□ -0.28
CDCA3-201ENST00000229265 NLGN1Q8N2Q7 840 aa13.28□□□□□ -0.28
CDCA3-201ENST00000229265 ATP10DQ9P241 1426 aa13.28□□□□□ -0.28
CDCA3-201ENST00000229265 CEP350Q5VT06 3117 aa13.27□□□□□ -0.28
CDCA3-201ENST00000229265 HDGFL1Q5TGJ6 251 aa13.27□□□□□ -0.29
CDCA3-201ENST00000229265 HYPKQ9NX55 129 aa13.27□□□□□ -0.29
CDCA3-201ENST00000229265 GIGYF1O75420 1035 aaPredicted RBP13.26□□□□□ -0.29
CDCA3-201ENST00000229265 GNAI2P04899 355 aa13.26□□□□□ -0.29
CDCA3-201ENST00000229265 HLFQ16534 295 aa13.26□□□□□ -0.29
CDCA3-201ENST00000229265 LRP10Q7Z4F1 713 aa13.26□□□□□ -0.29
CDCA3-201ENST00000229265 SLX4Q8IY92 1834 aa13.25□□□□□ -0.29
CDCA3-201ENST00000229265 ATP8B2P98198 1209 aa13.25□□□□□ -0.29
CDCA3-201ENST00000229265 FKBP5Q13451 457 aaPredicted RBP13.25□□□□□ -0.29
CDCA3-201ENST00000229265 PROSER3Q2NL68 480 aa13.25□□□□□ -0.29
CDCA3-201ENST00000229265 BMP2KLQ5H9B9 411 aa13.25□□□□□ -0.29
CDCA3-201ENST00000229265 SIRT2Q8IXJ6 389 aa13.25□□□□□ -0.29
CDCA3-201ENST00000229265 ZNF526Q8TF50 670 aaPredicted RBP13.25□□□□□ -0.29
CDCA3-201ENST00000229265 BCS1LQ9Y276 419 aa13.25□□□□□ -0.29
CDCA3-201ENST00000229265 ZNF330Q9Y3S2 320 aaPredicted RBP13.25□□□□□ -0.29
CDCA3-201ENST00000229265 CCDC88AQ3V6T2 1871 aa13.25□□□□□ -0.29
CDCA3-201ENST00000229265 COL4A1P02462 1669 aa13.24□□□□□ -0.29
CDCA3-201ENST00000229265 ANXA1P04083 346 aa13.24□□□□□ -0.29
CDCA3-201ENST00000229265 SERPINB2P05120 415 aa13.24□□□□□ -0.29
CDCA3-201ENST00000229265 ANKRD45Q5TZF3 282 aa13.24□□□□□ -0.29
CDCA3-201ENST00000229265 CEP85Q6P2H3 762 aa13.24□□□□□ -0.29
CDCA3-201ENST00000229265 TTLL7Q6ZT98 887 aa13.24□□□□□ -0.29
CDCA3-201ENST00000229265 TTC5Q8N0Z6 440 aa13.24□□□□□ -0.29
CDCA3-201ENST00000229265 FMNL2Q96PY5 1086 aa13.24□□□□□ -0.29
CDCA3-201ENST00000229265 PARP3Q9Y6F1 533 aa13.24□□□□□ -0.29
CDCA3-201ENST00000229265 NUP98P52948 1817 aa13.23□□□□□ -0.29
CDCA3-201ENST00000229265 ALDH1L1O75891 902 aa13.23□□□□□ -0.29
CDCA3-201ENST00000229265 DDX58O95786 925 aaKnown RBP13.23□□□□□ -0.29
CDCA3-201ENST00000229265 RASSF7Q02833 373 aa13.23□□□□□ -0.29
CDCA3-201ENST00000229265 PDIA6Q15084 440 aa13.23□□□□□ -0.29
CDCA3-201ENST00000229265 G2E3Q7L622 706 aa13.23□□□□□ -0.29
CDCA3-201ENST00000229265 IL27Q8NEV9 243 aa13.23□□□□□ -0.29
CDCA3-201ENST00000229265 DDX21Q9NR30 783 aaKnown RBP eCLIP13.23□□□□□ -0.29
CDCA3-201ENST00000229265 NOP58Q9Y2X3 529 aaKnown RBP13.23□□□□□ -0.29
CDCA3-201ENST00000229265 CACNA1FO60840 1977 aa13.23□□□□□ -0.29
CDCA3-201ENST00000229265 PRR5LQ6MZQ0 368 aa13.22□□□□□ -0.29
CDCA3-201ENST00000229265 OLFM4Q6UX06 510 aa13.22□□□□□ -0.29
CDCA3-201ENST00000229265 ERICH6Q7L0X2 663 aa13.22□□□□□ -0.29
CDCA3-201ENST00000229265 SRCIN1Q9C0H9 1055 aa13.22□□□□□ -0.29
CDCA3-201ENST00000229265 ERBB4Q15303 1308 aa13.21□□□□□ -0.29
CDCA3-201ENST00000229265 ZPR1O75312 459 aa13.21□□□□□ -0.29
CDCA3-201ENST00000229265 IL6STP40189 918 aaPredicted RBP13.21□□□□□ -0.29
CDCA3-201ENST00000229265 TGFB2P61812 414 aa13.21□□□□□ -0.29
CDCA3-201ENST00000229265 KSR2Q6VAB6 950 aa13.21□□□□□ -0.29
CDCA3-201ENST00000229265 OSBPL3Q9H4L5 887 aa13.21□□□□□ -0.29
CDCA3-201ENST00000229265 ABCC12Q96J65 1359 aa13.2□□□□□ -0.3
CDCA3-201ENST00000229265 RAB11FIP3O75154 756 aa13.2□□□□□ -0.3
CDCA3-201ENST00000229265 STARD3NLO95772 234 aa13.2□□□□□ -0.3
CDCA3-201ENST00000229265 SNRPA1P09661 255 aaKnown RBP13.2□□□□□ -0.3
CDCA3-201ENST00000229265 HSP90AB4PQ58FF6 505 aa13.2□□□□□ -0.3
CDCA3-201ENST00000229265 SLC4A10Q6U841 1118 aa13.2□□□□□ -0.3
CDCA3-201ENST00000229265 C3orf67Q6ZVT6 689 aa13.2□□□□□ -0.3
CDCA3-201ENST00000229265 DZIP3Q86Y13 1208 aaKnown RBP13.2□□□□□ -0.3
CDCA3-201ENST00000229265 DNAAF4Q8WXU2 420 aa13.2□□□□□ -0.3
CDCA3-201ENST00000229265 ANP32EQ9BTT0 268 aa13.2□□□□□ -0.3
CDCA3-201ENST00000229265 DAXXQ9UER7 740 aaPredicted RBP13.2□□□□□ -0.3
CDCA3-201ENST00000229265 GRIN3BO60391 1043 aa13.19□□□□□ -0.3
CDCA3-201ENST00000229265 ARHGAP27Q6ZUM4 889 aa13.19□□□□□ -0.3
CDCA3-201ENST00000229265 NECTIN2Q92692 538 aa13.19□□□□□ -0.3
CDCA3-201ENST00000229265 MEIS3Q99687 375 aa13.19□□□□□ -0.3
CDCA3-201ENST00000229265 USP44Q9H0E7 712 aa13.19□□□□□ -0.3
CDCA3-201ENST00000229265 FER1L6Q2WGJ9 1857 aa13.19□□□□□ -0.3
CDCA3-201ENST00000229265 UBN2Q6ZU65 1347 aa13.18□□□□□ -0.3
CDCA3-201ENST00000229265 DCAF8L1A6NGE4 600 aa13.18□□□□□ -0.3
CDCA3-201ENST00000229265 FAM177BA6PVY3 158 aa13.18□□□□□ -0.3
CDCA3-201ENST00000229265 NFKBIEO00221 500 aa13.18□□□□□ -0.3
CDCA3-201ENST00000229265 KIF3CO14782 793 aa13.18□□□□□ -0.3
CDCA3-201ENST00000229265 EIF2S2P20042 333 aaKnown RBP13.18□□□□□ -0.3
CDCA3-201ENST00000229265 BEND3Q5T5X7 828 aa13.18□□□□□ -0.3
CDCA3-201ENST00000229265 TAF1P21675 1872 aa13.18□□□□□ -0.3
CDCA3-201ENST00000229265 COL4A5P29400 1685 aa13.18□□□□□ -0.3
CDCA3-201ENST00000229265 ARFGEF2Q9Y6D5 1785 aa13.17□□□□□ -0.3
CDCA3-201ENST00000229265 UBTFL1P0CB47 393 aaPredicted RBP13.17□□□□□ -0.3
CDCA3-201ENST00000229265 MTX1Q13505 466 aa13.17□□□□□ -0.3
CDCA3-201ENST00000229265 BECN1Q14457 450 aa13.17□□□□□ -0.3
CDCA3-201ENST00000229265 SKAP1Q86WV1 359 aa13.17□□□□□ -0.3
CDCA3-201ENST00000229265 C2CD5Q86YS7 1000 aa13.17□□□□□ -0.3
CDCA3-201ENST00000229265 SYNE4Q8N205 404 aa13.17□□□□□ -0.3
CDCA3-201ENST00000229265 LINS1Q8NG48 757 aa13.17□□□□□ -0.3
CDCA3-201ENST00000229265 SSH3Q8TE77 659 aa13.17□□□□□ -0.3
CDCA3-201ENST00000229265 TEX13AQ9BXU3 409 aaPredicted RBP13.17□□□□□ -0.3
CDCA3-201ENST00000229265 LNPKQ9C0E8 428 aa13.17□□□□□ -0.3
CDCA3-201ENST00000229265 NMRK2Q9NPI5 230 aa13.17□□□□□ -0.3
CDCA3-201ENST00000229265 ZNF219Q9P2Y4 722 aaPredicted RBP13.17□□□□□ -0.3
CDCA3-201ENST00000229265 TIAM2Q8IVF5 1701 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms