RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 ANXA1P04083 346 aa23.42■■□□□ 1.34
PFN1-201ENST00000225655 HOXA10P31260 410 aaPredicted RBP23.42■■□□□ 1.34
PFN1-201ENST00000225655 FAM9BQ8IZU0 186 aa23.42■■□□□ 1.34
PFN1-201ENST00000225655 LAS1LQ9Y4W2 734 aaKnown RBP23.42■■□□□ 1.34
PFN1-201ENST00000225655 KRT24Q2M2I5 525 aa23.41■■□□□ 1.34
PFN1-201ENST00000225655 OLFM4Q6UX06 510 aa23.41■■□□□ 1.34
PFN1-201ENST00000225655 DNAJC5GQ8N7S2 189 aa23.41■■□□□ 1.34
PFN1-201ENST00000225655 DDX21Q9NR30 783 aaKnown RBP eCLIP23.41■■□□□ 1.34
PFN1-201ENST00000225655 COPS6Q7L5N1 327 aa23.4■■□□□ 1.34
PFN1-201ENST00000225655 NECTIN2Q92692 538 aa23.4■■□□□ 1.34
PFN1-201ENST00000225655 RPGRQ92834 1020 aaKnown RBP23.4■■□□□ 1.34
PFN1-201ENST00000225655 CFAP44Q96MT7 982 aa23.4■■□□□ 1.34
PFN1-201ENST00000225655 SNED1Q8TER0 1413 aa23.4■■□□□ 1.34
PFN1-201ENST00000225655 HOXB7P09629 217 aa23.39■■□□□ 1.33
PFN1-201ENST00000225655 XAGE3Q8WTP9 111 aa23.39■■□□□ 1.33
PFN1-201ENST00000225655 ZNF277Q9NRM2 450 aaPredicted RBP23.39■■□□□ 1.33
PFN1-201ENST00000225655 HSP90AB3PQ58FF7 597 aa23.38■■□□□ 1.33
PFN1-201ENST00000225655 CC2D2BQ6DHV5 1058 aa23.38■■□□□ 1.33
PFN1-201ENST00000225655 UTP14AQ9BVJ6 771 aaKnown RBP23.38■■□□□ 1.33
PFN1-201ENST00000225655 RNF123Q5XPI4 1314 aa23.37■■□□□ 1.33
PFN1-201ENST00000225655 DDNO94850 711 aaPredicted RBP23.37■■□□□ 1.33
PFN1-201ENST00000225655 AIMP1Q12904 312 aaKnown RBP23.37■■□□□ 1.33
PFN1-201ENST00000225655 SLC10A5Q5PT55 438 aa23.37■■□□□ 1.33
PFN1-201ENST00000225655 RBM17Q96I25 401 aaKnown RBP23.37■■□□□ 1.33
PFN1-201ENST00000225655 CRAMP1Q96RY5 1269 aa23.37■■□□□ 1.33
PFN1-201ENST00000225655 CHPF2Q9P2E5 772 aa23.37■■□□□ 1.33
PFN1-201ENST00000225655 HDGFL1Q5TGJ6 251 aa23.36■■□□□ 1.33
PFN1-201ENST00000225655 SYNE4Q8N205 404 aa23.36■■□□□ 1.33
PFN1-201ENST00000225655 PSMD1Q99460 953 aa23.36■■□□□ 1.33
PFN1-201ENST00000225655 APAF1O14727 1248 aa23.35■■□□□ 1.33
PFN1-201ENST00000225655 IARSP41252 1262 aaKnown RBP23.35■■□□□ 1.33
PFN1-201ENST00000225655 GRIPAP1Q4V328 841 aa23.35■■□□□ 1.33
PFN1-201ENST00000225655 C3orf67Q6ZVT6 689 aa23.35■■□□□ 1.33
PFN1-201ENST00000225655 NLRP3Q96P20 1036 aa23.35■■□□□ 1.33
PFN1-201ENST00000225655 SCN4AP35499 1836 aa23.35■■□□□ 1.33
PFN1-201ENST00000225655 ZNF853P0CG23 659 aa23.34■■□□□ 1.33
PFN1-201ENST00000225655 TCIRG1Q13488 830 aa23.34■■□□□ 1.33
PFN1-201ENST00000225655 NLRP10Q86W26 655 aa23.34■■□□□ 1.33
PFN1-201ENST00000225655 L3MBTL3Q96JM7 780 aaPredicted RBP23.34■■□□□ 1.33
PFN1-201ENST00000225655 MBIPQ9NS73 344 aa23.34■■□□□ 1.33
PFN1-201ENST00000225655 DBF4Q9UBU7 674 aaPredicted RBP23.34■■□□□ 1.33
PFN1-201ENST00000225655 LAMB2P55268 1798 aa23.33■■□□□ 1.33
PFN1-201ENST00000225655 HTRA3P83110 453 aa23.33■■□□□ 1.33
PFN1-201ENST00000225655 CALD1Q05682 793 aaKnown RBP23.33■■□□□ 1.33
PFN1-201ENST00000225655 IQCA1LA6NCM1 817 aa23.32■■□□□ 1.32
PFN1-201ENST00000225655 PPEF1O14829 653 aaPredicted RBP23.32■■□□□ 1.32
PFN1-201ENST00000225655 DUSP27Q5VZP5 1158 aa23.32■■□□□ 1.32
PFN1-201ENST00000225655 IFT57Q9NWB7 429 aa23.32■■□□□ 1.32
PFN1-201ENST00000225655 ZNF541Q9H0D2 1346 aa23.32■■□□□ 1.32
PFN1-201ENST00000225655 FZD9O00144 591 aa23.31■■□□□ 1.32
PFN1-201ENST00000225655 PLBD2Q8NHP8 589 aa23.31■■□□□ 1.32
PFN1-201ENST00000225655 KLRG1Q96E93 195 aa23.3■■□□□ 1.32
PFN1-201ENST00000225655 HYPKQ9NX55 129 aa23.3■■□□□ 1.32
PFN1-201ENST00000225655 GNAI1P63096 354 aa23.29■■□□□ 1.32
PFN1-201ENST00000225655 CHADLQ6NUI6 762 aa23.29■■□□□ 1.32
PFN1-201ENST00000225655 ANKRD13DQ6ZTN6 518 aa23.29■■□□□ 1.32
PFN1-201ENST00000225655 TRMT112Q9UI30 125 aaKnown RBP23.29■■□□□ 1.32
PFN1-201ENST00000225655 SH3TC1Q8TE82 1336 aa23.29■■□□□ 1.32
PFN1-201ENST00000225655 JDP2Q8WYK2 163 aa23.28■■□□□ 1.32
PFN1-201ENST00000225655 ATP6V0A2Q9Y487 856 aa23.28■■□□□ 1.32
PFN1-201ENST00000225655 ABCC4O15439 1325 aa23.28■■□□□ 1.32
PFN1-201ENST00000225655 HCLS1P14317 486 aaPredicted RBP23.27■■□□□ 1.32
PFN1-201ENST00000225655 TMX4Q9H1E5 349 aaPredicted RBP23.27■■□□□ 1.32
PFN1-201ENST00000225655 TAF1DQ9H5J8 278 aaPredicted RBP23.27■■□□□ 1.32
PFN1-201ENST00000225655 COL4A5P29400 1685 aa23.27■■□□□ 1.32
PFN1-201ENST00000225655 TCERG1O14776 1098 aaKnown RBP23.26■■□□□ 1.31
PFN1-201ENST00000225655 POTEIP0CG38 1075 aa23.26■■□□□ 1.31
PFN1-201ENST00000225655 POTEJP0CG39 1038 aa23.26■■□□□ 1.31
PFN1-201ENST00000225655 GPC2Q8N158 579 aa23.26■■□□□ 1.31
PFN1-201ENST00000225655 JMYQ8N9B5 988 aa23.26■■□□□ 1.31
PFN1-201ENST00000225655 ISCA1Q9BUE6 129 aa23.26■■□□□ 1.31
PFN1-201ENST00000225655 DDX60Q8IY21 1712 aaKnown RBP23.25■■□□□ 1.31
PFN1-201ENST00000225655 BBOX1O75936 387 aa23.25■■□□□ 1.31
PFN1-201ENST00000225655 SLC51AQ86UW1 340 aa23.25■■□□□ 1.31
PFN1-201ENST00000225655 NCBP3Q53F19 620 aaKnown RBP23.24■■□□□ 1.31
PFN1-201ENST00000225655 LDHDQ86WU2 507 aa23.24■■□□□ 1.31
PFN1-201ENST00000225655 LARGE2Q8N3Y3 721 aa23.24■■□□□ 1.31
PFN1-201ENST00000225655 HACL1Q9UJ83 578 aa23.24■■□□□ 1.31
PFN1-201ENST00000225655 EIF6P56537 245 aaKnown RBP23.23■■□□□ 1.31
PFN1-201ENST00000225655 DDX46Q7L014 1031 aaKnown RBP23.23■■□□□ 1.31
PFN1-201ENST00000225655 VPS33BQ9H267 617 aa23.23■■□□□ 1.31
PFN1-201ENST00000225655 ADAMTSL1Q8N6G6 1762 aa23.22■■□□□ 1.31
PFN1-201ENST00000225655 TRIM28Q13263 835 aaKnown RBP23.22■■□□□ 1.31
PFN1-201ENST00000225655 SP8Q8IXZ3 490 aa23.22■■□□□ 1.31
PFN1-201ENST00000225655 ATP5J2-PTCD1G3V325 749 aa23.21■■□□□ 1.31
PFN1-201ENST00000225655 ELL2O00472 640 aaPredicted RBP23.21■■□□□ 1.31
PFN1-201ENST00000225655 EPHX2P34913 555 aa23.21■■□□□ 1.31
PFN1-201ENST00000225655 GRAPQ13588 217 aa23.21■■□□□ 1.31
PFN1-201ENST00000225655 GRAPLQ8TC17 118 aaPredicted RBP23.21■■□□□ 1.31
PFN1-201ENST00000225655 RTFDC1Q9BY42 306 aaPredicted RBP23.21■■□□□ 1.31
PFN1-201ENST00000225655 TAF1P21675 1872 aa23.21■■□□□ 1.31
PFN1-201ENST00000225655 CCDC27Q2M243 656 aa23.2■■□□□ 1.3
PFN1-201ENST00000225655 PNMA8AQ86V59 439 aaPredicted RBP23.2■■□□□ 1.3
PFN1-201ENST00000225655 C8orf58Q8NAV2 365 aa23.2■■□□□ 1.3
PFN1-201ENST00000225655 SUPT20HQ8NEM7 779 aa23.2■■□□□ 1.3
PFN1-201ENST00000225655 FAM89AQ96GI7 184 aa23.2■■□□□ 1.3
PFN1-201ENST00000225655 CHMP4AQ9BY43 222 aa23.2■■□□□ 1.3
PFN1-201ENST00000225655 PPIP5K2O43314 1243 aa23.19■■□□□ 1.3
PFN1-201ENST00000225655 GOLGA2Q08379 1002 aa23.19■■□□□ 1.3
PFN1-201ENST00000225655 EAPPQ56P03 285 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms