RNA–Protein interactions for RNA: ENST00000086933.2

GSC2-201, Transcript of goosecoid homeobox 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GSC2, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2-201ENST00000086933 NLRP10Q86W26 655 aa35.15■■■■□ 3.22
GSC2-201ENST00000086933 SNED1Q8TER0 1413 aa35.15■■■■□ 3.22
GSC2-201ENST00000086933 CHMP4AQ9BY43 222 aa35.14■■■■□ 3.22
GSC2-201ENST00000086933 ANKRD13DQ6ZTN6 518 aa35.13■■■■□ 3.21
GSC2-201ENST00000086933 CACNA1SQ13698 1873 aa35.13■■■■□ 3.21
GSC2-201ENST00000086933 WDR63Q8IWG1 891 aa35.12■■■■□ 3.21
GSC2-201ENST00000086933 UTP14AQ9BVJ6 771 aaKnown RBP35.12■■■■□ 3.21
GSC2-201ENST00000086933 KIF3CO14782 793 aa35.11■■■■□ 3.21
GSC2-201ENST00000086933 TSPYL6Q8N831 410 aa35.11■■■■□ 3.21
GSC2-201ENST00000086933 ISCA1Q9BUE6 129 aa35.11■■■■□ 3.21
GSC2-201ENST00000086933 ALDH1B1P30837 517 aa35.1■■■■□ 3.21
GSC2-201ENST00000086933 TRIM28Q13263 835 aaKnown RBP35.1■■■■□ 3.21
GSC2-201ENST00000086933 TSR2Q969E8 191 aaKnown RBP35.1■■■■□ 3.21
GSC2-201ENST00000086933 DICER1Q9UPY3 1922 aaKnown RBP35.09■■■■□ 3.21
GSC2-201ENST00000086933 ELL2O00472 640 aaPredicted RBP35.08■■■■□ 3.21
GSC2-201ENST00000086933 ZNF526Q8TF50 670 aaPredicted RBP35.08■■■■□ 3.21
GSC2-201ENST00000086933 C3orf67Q6ZVT6 689 aa35.07■■■■□ 3.2
GSC2-201ENST00000086933 CCDC88AQ3V6T2 1871 aa35.07■■■■□ 3.2
GSC2-201ENST00000086933 CCDC30Q5VVM6 783 aa35.06■■■■□ 3.2
GSC2-201ENST00000086933 CRAMP1Q96RY5 1269 aa35.06■■■■□ 3.2
GSC2-201ENST00000086933 TAOK3Q9H2K8 898 aa35.06■■■■□ 3.2
GSC2-201ENST00000086933 TIAM2Q8IVF5 1701 aa35.06■■■■□ 3.2
GSC2-201ENST00000086933 CCDC93Q567U6 631 aa35.05■■■■□ 3.2
GSC2-201ENST00000086933 PHAXQ9H814 394 aaKnown RBP35.04■■■■□ 3.2
GSC2-201ENST00000086933 FANCIQ9NVI1 1328 aa35.04■■■■□ 3.2
GSC2-201ENST00000086933 SENP3-EIF4A1A0A087X0R7 540 aa35.03■■■■□ 3.2
GSC2-201ENST00000086933 ZNF219Q9P2Y4 722 aaPredicted RBP35.03■■■■□ 3.2
GSC2-201ENST00000086933 FAM9BQ8IZU0 186 aa35.02■■■■□ 3.2
GSC2-201ENST00000086933 NLRP3Q96P20 1036 aa35.02■■■■□ 3.2
GSC2-201ENST00000086933 SH3TC1Q8TE82 1336 aa35.02■■■■□ 3.2
GSC2-201ENST00000086933 LAMB2P55268 1798 aa35.01■■■■□ 3.2
GSC2-201ENST00000086933 KDM2BQ8NHM5 1336 aa35.01■■■■□ 3.19
GSC2-201ENST00000086933 ZNF521Q96K83 1311 aa35.01■■■■□ 3.19
GSC2-201ENST00000086933 TWISTNBQ3B726 338 aaPredicted RBP35■■■■□ 3.19
GSC2-201ENST00000086933 CC2D2BQ6DHV5 1058 aa35■■■■□ 3.19
GSC2-201ENST00000086933 RTKN2Q8IZC4 609 aa35■■■■□ 3.19
GSC2-201ENST00000086933 NMRK2Q9NPI5 230 aa35■■■■□ 3.19
GSC2-201ENST00000086933 FKBP4Q02790 459 aaKnown RBP eCLIP34.99■■■■□ 3.19
GSC2-201ENST00000086933 GOLGA2Q08379 1002 aa34.99■■■■□ 3.19
GSC2-201ENST00000086933 RPGRQ92834 1020 aaKnown RBP34.99■■■■□ 3.19
GSC2-201ENST00000086933 TRMT112Q9UI30 125 aaKnown RBP34.99■■■■□ 3.19
GSC2-201ENST00000086933 SYNE4Q8N205 404 aa34.98■■■■□ 3.19
GSC2-201ENST00000086933 RBM17Q96I25 401 aaKnown RBP34.98■■■■□ 3.19
GSC2-201ENST00000086933 DDX60Q8IY21 1712 aaKnown RBP34.98■■■■□ 3.19
GSC2-201ENST00000086933 GLTPD2A6NH11 291 aa34.97■■■■□ 3.19
GSC2-201ENST00000086933 OLFM4Q6UX06 510 aa34.97■■■■□ 3.19
GSC2-201ENST00000086933 GRIPAP1Q4V328 841 aa34.96■■■■□ 3.19
GSC2-201ENST00000086933 PSMD1Q99460 953 aa34.96■■■■□ 3.19
GSC2-201ENST00000086933 SPINK5Q9NQ38 1064 aaPredicted RBP34.96■■■■□ 3.19
GSC2-201ENST00000086933 ATP5J2-PTCD1G3V325 749 aa34.94■■■■□ 3.18
GSC2-201ENST00000086933 RIC3Q7Z5B4 369 aa34.94■■■■□ 3.18
GSC2-201ENST00000086933 HCLS1P14317 486 aaPredicted RBP34.93■■■■□ 3.18
GSC2-201ENST00000086933 CACNA1FO60840 1977 aa34.93■■■■□ 3.18
GSC2-201ENST00000086933 ABCC4O15439 1325 aa34.92■■■■□ 3.18
GSC2-201ENST00000086933 VAMP4O75379 141 aa34.92■■■■□ 3.18
GSC2-201ENST00000086933 METTL22Q9BUU2 404 aaPredicted RBP34.92■■■■□ 3.18
GSC2-201ENST00000086933 WDR90Q96KV7 1748 aa34.92■■■■□ 3.18
GSC2-201ENST00000086933 TOMM70O94826 608 aa34.91■■■■□ 3.18
GSC2-201ENST00000086933 DDX58O95786 925 aaKnown RBP34.91■■■■□ 3.18
GSC2-201ENST00000086933 SF3B3Q15393 1217 aaKnown RBP34.91■■■■□ 3.18
GSC2-201ENST00000086933 CCDC191Q8NCU4 936 aa34.91■■■■□ 3.18
GSC2-201ENST00000086933 SALL2Q9Y467 1007 aaPredicted RBP34.91■■■■□ 3.18
GSC2-201ENST00000086933 CCER2I3L3R5 266 aa34.9■■■■□ 3.18
GSC2-201ENST00000086933 STK31Q9BXU1 1019 aa34.9■■■■□ 3.18
GSC2-201ENST00000086933 PPEF1O14829 653 aaPredicted RBP34.89■■■■□ 3.18
GSC2-201ENST00000086933 KSR2Q6VAB6 950 aa34.89■■■■□ 3.18
GSC2-201ENST00000086933 FAM89AQ96GI7 184 aa34.89■■■■□ 3.18
GSC2-201ENST00000086933 ZBTB38Q8NAP3 1195 aaPredicted RBP34.88■■■■□ 3.17
GSC2-201ENST00000086933 ATP6V0A2Q9Y487 856 aa34.88■■■■□ 3.17
GSC2-201ENST00000086933 BBOX1O75936 387 aa34.87■■■■□ 3.17
GSC2-201ENST00000086933 MYH16Q9H6N6 1097 aa34.87■■■■□ 3.17
GSC2-201ENST00000086933 EXOSC9Q06265 439 aaKnown RBP34.86■■■■□ 3.17
GSC2-201ENST00000086933 RBM46Q8TBY0 533 aaKnown RBP34.86■■■■□ 3.17
GSC2-201ENST00000086933 MYD88Q99836 296 aa34.86■■■■□ 3.17
GSC2-201ENST00000086933 ZNF277Q9NRM2 450 aaPredicted RBP34.86■■■■□ 3.17
GSC2-201ENST00000086933 POTECB2RU33 542 aa34.85■■■■□ 3.17
GSC2-201ENST00000086933 SLC4A2P04920 1241 aa34.85■■■■□ 3.17
GSC2-201ENST00000086933 G2E3Q7L622 706 aa34.85■■■■□ 3.17
GSC2-201ENST00000086933 SLC51AQ86UW1 340 aa34.85■■■■□ 3.17
GSC2-201ENST00000086933 RRAGCQ9HB90 399 aa34.85■■■■□ 3.17
GSC2-201ENST00000086933 MAP3K2Q9Y2U5 619 aa34.85■■■■□ 3.17
GSC2-201ENST00000086933 CEP350Q5VT06 3117 aa34.85■■■■□ 3.17
GSC2-201ENST00000086933 LRRC37AA6NMS7 1700 aa34.84■■■■□ 3.17
GSC2-201ENST00000086933 PI4KAP2A4QPH2 592 aa34.84■■■■□ 3.17
GSC2-201ENST00000086933 PCCAP05165 728 aaPredicted RBP34.84■■■■□ 3.17
GSC2-201ENST00000086933 IARSP41252 1262 aaKnown RBP34.84■■■■□ 3.17
GSC2-201ENST00000086933 GRAPQ13588 217 aa34.84■■■■□ 3.17
GSC2-201ENST00000086933 DPY19L2Q6NUT2 758 aa34.84■■■■□ 3.17
GSC2-201ENST00000086933 PI4KAP1Q8N8J0 262 aa34.84■■■■□ 3.17
GSC2-201ENST00000086933 GRAPLQ8TC17 118 aaPredicted RBP34.84■■■■□ 3.17
GSC2-201ENST00000086933 IGKV5-2P06315 115 aa34.83■■■■□ 3.17
GSC2-201ENST00000086933 IRS4O14654 1257 aaPredicted RBP34.82■■■■□ 3.16
GSC2-201ENST00000086933 DDX46Q7L014 1031 aaKnown RBP34.82■■■■□ 3.16
GSC2-201ENST00000086933 SP8Q8IXZ3 490 aa34.82■■■■□ 3.16
GSC2-201ENST00000086933 RTFDC1Q9BY42 306 aaPredicted RBP34.82■■■■□ 3.16
GSC2-201ENST00000086933 CWC25Q9NXE8 425 aaPredicted RBP34.82■■■■□ 3.16
GSC2-201ENST00000086933 COL4A5P29400 1685 aa34.82■■■■□ 3.16
GSC2-201ENST00000086933 FZD9O00144 591 aa34.81■■■■□ 3.16
GSC2-201ENST00000086933 VEGFAP15692 232 aaPredicted RBP34.81■■■■□ 3.16
GSC2-201ENST00000086933 FLIIQ13045 1269 aa34.81■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms