RNA–Protein interactions for RNA: ENSMUST00000210774.1

Ebf3-208, Transcript of Transcription factor COE3, mousemouse

TSL 1 (best) BASIC

Gene Ebf3, Length 2,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-208ENSMUST00000210774 PaskQ8CEE6 1383 aa17.34■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Tpx2A2APB8 745 aaKnown RBP17.34■□□□□ 0.37
Ebf3-208ENSMUST00000210774 GscQ02591 256 aa17.34■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Ice2Q3UZ18 988 aaKnown RBP17.34■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Pwp2Q8BU03 919 aaKnown RBP17.34■□□□□ 0.37
Ebf3-208ENSMUST00000210774 DonsonQ9QXP4 560 aa17.34■□□□□ 0.37
Ebf3-208ENSMUST00000210774 IghaA0A0A6YXW6 389 aa17.34■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Uri1Q3TLD5 531 aa17.34■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Slu7Q8BHJ9 585 aa17.34■□□□□ 0.37
Ebf3-208ENSMUST00000210774 HnrnpmQ9D0E1 729 aaKnown RBP17.34■□□□□ 0.37
Ebf3-208ENSMUST00000210774 MarsQ68FL6 902 aaKnown RBP17.33■□□□□ 0.37
Ebf3-208ENSMUST00000210774 Adck5Q80V03 582 aa17.33■□□□□ 0.37
Ebf3-208ENSMUST00000210774 HypkQ9CR41 129 aa17.33■□□□□ 0.37
Ebf3-208ENSMUST00000210774 MycbpQ9EQS3 103 aa17.33■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Nol8Q3UHX0 1147 aaKnown RBP17.32■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Mns1Q61884 491 aa17.32■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Q66JV7 365 aa17.32■□□□□ 0.36
Ebf3-208ENSMUST00000210774 FosbP13346 338 aa17.32■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Zc3h6Q8BYK8 1177 aa17.32■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Ms4a2P20490 235 aa17.31■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Kcnk13Q8R1P5 405 aa17.31■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Slit3Q9WVB4 1523 aa17.31■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Trim25Q61510 634 aaKnown RBP17.31■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Ppp1r42Q8R1Z4 357 aa17.31■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Nphp1Q9QY53 687 aa17.31■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Plekhg1F6S200 1446 aa17.3■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Cdca7lQ922M5 438 aa17.3■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Smc1aQ9CU62 1233 aaKnown RBP17.3■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Tpm4Q6IRU2 248 aa17.3■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Pcdhb15Q91Y04 786 aa17.3■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Klhl34A2AI76 644 aa17.29■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Lrrc6O88978 473 aa17.29■□□□□ 0.36
Ebf3-208ENSMUST00000210774 MyclP10166 368 aa17.29■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Q8CEZ4 452 aa17.29■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Zranb2Q9R020 330 aaKnown RBP17.29■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Prc1Q99K43 603 aaKnown RBP17.28■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Adgrl1Q80TR1 1466 aa17.28■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Ppfia3P60469 1194 aa17.28■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Tti2Q8BGV4 512 aa17.28■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Aldh1l2Q8K009 923 aa17.28■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Mrpl50Q8VDT9 159 aaKnown RBP17.28■□□□□ 0.36
Ebf3-208ENSMUST00000210774 NaspQ99MD9 773 aaKnown RBP17.28■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Atg3Q9CPX6 314 aa17.28■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Mei4Q8BRM6 389 aa17.28■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Gm11983V9GXS8 105 aa17.28■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Uhrf1bp1B2KF50 1429 aa17.27■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Ercc6l2Q9JIM3 1537 aa17.27■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Drc7Q6V3W6 876 aa17.27■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Cfap69Q8BH53 942 aa17.27■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Dnm3Q8BZ98 863 aa17.27■□□□□ 0.36
Ebf3-208ENSMUST00000210774 Gm3409A0A0G2JE67 319 aa17.27■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Cwc27Q3TKY6 469 aa17.27■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Ubash3aQ3V3E1 624 aa17.27■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Unc5clQ6R653 518 aa17.27■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Ano10Q8BH79 659 aa17.27■□□□□ 0.35
Ebf3-208ENSMUST00000210774 CoblQ5NBX1 1337 aaKnown RBP17.26■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Rnf123Q5XPI3 1314 aa17.26■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Pkp1P97350 728 aaKnown RBP17.26■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Ppp2r3dQ9Z176 491 aa17.26■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Anks1aP59672 1150 aa17.26■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Klra4Q60651 263 aa17.26■□□□□ 0.35
Ebf3-208ENSMUST00000210774 OptnQ8K3K8 584 aa17.26■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Tbc1d2B1AVH7 922 aa17.25■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Pcdh10E9PXQ7 1057 aa17.25■□□□□ 0.35
Ebf3-208ENSMUST00000210774 TrhQ62361 256 aa17.25■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Cwc15Q9JHS9 229 aaKnown RBP17.25■□□□□ 0.35
Ebf3-208ENSMUST00000210774 4930407I10RikD3Z5T8 1512 aa17.25■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Aox4Q3TYQ9 1336 aa17.25■□□□□ 0.35
Ebf3-208ENSMUST00000210774 FntaQ61239 377 aa17.25■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Irx6Q9ER75 438 aa17.25■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Leo1Q5XJE5 667 aa17.25■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Calcoco2A2A6M5 331 aa17.24■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Hnrnpul1Q8VDM6 859 aaKnown RBP17.24■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Q9D9S1 216 aa17.24■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Ano8Q6PB70 1060 aa17.24■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Hook1Q8BIL5 728 aa17.24■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Fsd2Q8BZ52 692 aa17.24■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Cgref1Q8R1U2 281 aa17.24■□□□□ 0.35
Ebf3-208ENSMUST00000210774 ChmQ9QXG2 665 aa17.24■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Magi2Q9WVQ1 1275 aa17.24■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Ubn2Q80WC1 1314 aa17.23■□□□□ 0.35
Ebf3-208ENSMUST00000210774 1700113H08RikE9Q9Q5 327 aa17.23■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Trim55G3X8Y1 545 aa17.23■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Zbtb40Q6PCS8 1258 aa17.23■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Fam76aQ922G2 307 aa17.23■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Osbpl5Q9ER64 874 aa17.23■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Gm42641I6L9G2 585 aa17.23■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Tnnt1O88346 262 aa17.23■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Nap1l1P28656 391 aaKnown RBP17.23■□□□□ 0.35
Ebf3-208ENSMUST00000210774 AtripQ8BMG1 785 aa17.23■□□□□ 0.35
Ebf3-208ENSMUST00000210774 GzmnQ920S1 248 aa17.23■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Krt85Q9Z2T6 507 aa17.23■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Topaz1E5FYH1 1653 aa17.23■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Map3k19E9Q3S4 1311 aa17.23■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Rad50P70388 1312 aa17.23■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Q32P12 615 aa17.22■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Zbtb45Q52KG4 520 aa17.22■□□□□ 0.35
Ebf3-208ENSMUST00000210774 EspnlQ3UYR4 1005 aa17.22■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Ggnbp2Q5SV77 696 aa17.22■□□□□ 0.35
Ebf3-208ENSMUST00000210774 Ccne1Q61457 408 aa17.22■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 7.7 ms