RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Prr5lA2AVJ5 370 aa11.39□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Dll1Q61483 722 aa11.39□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Scaf8Q6DID3 1268 aa11.39□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Gpr101Q80T62 511 aa11.39□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Fmr1nbQ80ZA7 238 aa11.39□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Rsph6aQ8CDR2 708 aa11.39□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Dcaf11Q91VU6 549 aa11.39□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 MetP16056 1379 aa11.39□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 AfdnQ9QZQ1 1820 aaKnown RBP11.38□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Map2k1P31938 393 aa11.38□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Snai1Q02085 264 aa11.38□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Tom1l2Q5SRX1 507 aa11.38□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Rbm5Q91YE7 815 aaKnown RBP11.38□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Htra3Q9D236 459 aa11.38□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Arih1Q9Z1K5 555 aa11.38□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 PrxO55103 1391 aa11.38□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Gm11939A2A592 99 aa11.37□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Esco1Q69Z69 843 aa11.37□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Slf2Q6P9P0 1278 aa11.37□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Onecut3Q8K557 490 aa11.37□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Stk3Q9JI10 497 aa11.37□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 PigbQ9JJQ0 542 aa11.37□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Mnx1Q9QZW9 404 aa11.37□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Celf2Q9Z0H4 508 aaKnown RBP11.37□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Ldlrad1D3YYZ1 218 aa11.36□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 LtbrP50284 415 aa11.36□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Map9Q3TRR0 646 aa11.36□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Slc4a2P13808 1237 aaKnown RBP11.35□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Ppp1r15aP17564 657 aa11.35□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Cxcl9P18340 126 aa11.35□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Mrs2Q5NCE8 434 aa11.35□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Exoc6Q8R313 802 aa11.35□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Sirt2Q8VDQ8 389 aa11.35□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Gpr37l1Q99JG2 481 aa11.35□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 NgdnQ9DB96 315 aaKnown RBP11.35□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Ncor1Q60974 2453 aa11.35□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Mtcl1Q3UHU5 1945 aa11.35□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Kif13bA0A286YCV9 1847 aa11.35□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Tiam2Q6ZPF3 1715 aa11.35□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Mrc1Q61830 1456 aa11.34□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Pde4bB1AWC9 736 aa11.34□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Gm12185Q5NCB2 835 aa11.34□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 RubcnQ80U62 956 aa11.34□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Tcerg1Q8CGF7 1100 aaKnown RBP11.34□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Igf2bp3Q9CPN8 579 aaKnown RBP11.34□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Tnip1Q9WUU8 647 aa11.34□□□□□ -0.59
Pdlim5-209ENSMUST00000196908 Zmynd8A2A484 1235 aaKnown RBP11.33□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 CenpbP27790 599 aa11.33□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Mcm10Q0VBD2 885 aa11.33□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Ifit1bl2Q3U687 466 aa11.33□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Ankrd13cQ3UX43 541 aa11.33□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Trim28Q62318 834 aa11.33□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Dbndd1Q9CZ00 160 aa11.33□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Mical3Q8CJ19 1993 aa11.33□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Ubr2Q6WKZ8 1755 aa11.33□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 CltaO08585 235 aa11.32□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Wwc2Q6NXJ0 1187 aa11.32□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Rassf10Q8BL43 508 aa11.32□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Mylk2Q8VCR8 613 aa11.32□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 TnikP83510 1323 aa11.32□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Stox1B2RQL2 990 aa11.31□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Zfp777B9EKF4 885 aa11.31□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Cyp2c23E9Q5K4 494 aa11.31□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Snap23O09044 210 aa11.31□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 PnnO35691 725 aaKnown RBP11.31□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Pbx2O35984 430 aa11.31□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Sp8Q8BMJ8 486 aa11.31□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Lhx6Q9R1R0 363 aa11.31□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Uhrf1bp1B2KF50 1429 aa11.31□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Cntnap3E9PY62 1287 aa11.3□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 HunkO88866 714 aa11.3□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Insm1Q63ZV0 521 aa11.3□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Ccdc93Q7TQK5 629 aa11.3□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Gabbr2Q80T41 940 aa11.3□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Strip1Q8C079 837 aa11.3□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Champ1Q8K327 802 aaKnown RBP11.3□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Gigyf1Q99MR1 1044 aaKnown RBP11.3□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Irx6Q9ER75 438 aa11.3□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Itgb7P26011 806 aa11.29□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 SowahdQ8BY98 327 aa11.29□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Slc12a5Q91V14 1138 aa11.29□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Klf15Q9EPW2 415 aa11.29□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Fzd9Q9R216 592 aa11.29□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Mapk8ip1Q9WVI9 707 aa11.29□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Atp6v0a2P15920 856 aa11.28□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Chrna5Q2MKA5 467 aa11.28□□□□□ -0.6
Pdlim5-209ENSMUST00000196908 Zbtb22Q9Z0G7 638 aa11.27□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Arrdc4A0A0B4J1F4 415 aa11.26□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Dctn1O08788 1281 aa11.26□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Cnnm1Q0GA42 951 aa11.26□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 GmpsQ3THK7 693 aa11.26□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Zc3h12cQ5DTV4 884 aa11.26□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Gimap8Q75N62 688 aa11.26□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Atxn2lQ7TQH0 1049 aaKnown RBP11.26□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Rab11fip3Q8CHD8 1047 aa11.26□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Pank3Q8R2W9 370 aa11.26□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Gimap3Q99MI6 301 aa11.26□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Cyp2ab1S4R196 498 aa11.26□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Eddm13E9Q7F5 164 aa11.25□□□□□ -0.61
Pdlim5-209ENSMUST00000196908 Ly6dP35459 127 aa11.25□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 40.2 ms