RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 PigbQ9JJQ0 542 aa13.68□□□□□ -0.22
Vps54-202ENSMUST00000109578 FanccP50652 591 aa13.68□□□□□ -0.22
Vps54-202ENSMUST00000109578 Cnnm1Q0GA42 951 aa13.68□□□□□ -0.22
Vps54-202ENSMUST00000109578 Ctdnep1Q3TP92 244 aa13.68□□□□□ -0.22
Vps54-202ENSMUST00000109578 Ppm1mQ8BU27 406 aa13.68□□□□□ -0.22
Vps54-202ENSMUST00000109578 Atf7Q8R0S1 413 aa13.68□□□□□ -0.22
Vps54-202ENSMUST00000109578 Lnx1O70263 728 aa13.67□□□□□ -0.22
Vps54-202ENSMUST00000109578 FosbP13346 338 aa13.67□□□□□ -0.22
Vps54-202ENSMUST00000109578 Usp25P57080 1055 aa13.67□□□□□ -0.22
Vps54-202ENSMUST00000109578 Larp1Q6ZQ58 1072 aaKnown RBP13.67□□□□□ -0.22
Vps54-202ENSMUST00000109578 Igbp1bQ9QZ29 343 aa13.67□□□□□ -0.22
Vps54-202ENSMUST00000109578 Sipa1l2Q80TE4 1722 aa13.67□□□□□ -0.22
Vps54-202ENSMUST00000109578 1700006A11RikB9EHI3 544 aa13.67□□□□□ -0.22
Vps54-202ENSMUST00000109578 Add3Q9QYB5 706 aaKnown RBP13.67□□□□□ -0.22
Vps54-202ENSMUST00000109578 Nid2O88322 1403 aa13.67□□□□□ -0.22
Vps54-202ENSMUST00000109578 Rims2Q9EQZ7 1530 aa13.67□□□□□ -0.22
Vps54-202ENSMUST00000109578 Wdr17E9Q271 1322 aa13.67□□□□□ -0.22
Vps54-202ENSMUST00000109578 Ptgs1P22437 602 aa13.67□□□□□ -0.22
Vps54-202ENSMUST00000109578 GpkowQ56A08 488 aa13.67□□□□□ -0.22
Vps54-202ENSMUST00000109578 IbspQ61711 324 aa13.67□□□□□ -0.22
Vps54-202ENSMUST00000109578 Dzip1Q8BMD2 852 aa13.67□□□□□ -0.22
Vps54-202ENSMUST00000109578 NmiO35309 314 aa13.67□□□□□ -0.22
Vps54-202ENSMUST00000109578 Gpatch11Q3UFS4 262 aa13.66□□□□□ -0.22
Vps54-202ENSMUST00000109578 Tbc1d31Q6NXY1 996 aa13.66□□□□□ -0.22
Vps54-202ENSMUST00000109578 Rps6kb1Q8BSK8 525 aa13.66□□□□□ -0.22
Vps54-202ENSMUST00000109578 Pde3bQ61409 1100 aa13.66□□□□□ -0.22
Vps54-202ENSMUST00000109578 DbnlQ62418 436 aa13.66□□□□□ -0.22
Vps54-202ENSMUST00000109578 Kcnf1Q7TSH7 493 aa13.66□□□□□ -0.22
Vps54-202ENSMUST00000109578 SrrtQ99MR6 875 aaKnown RBP13.66□□□□□ -0.22
Vps54-202ENSMUST00000109578 Bloc1s2Q9CWG9 143 aa13.66□□□□□ -0.22
Vps54-202ENSMUST00000109578 Fam50bQ9WTJ8 334 aa13.66□□□□□ -0.22
Vps54-202ENSMUST00000109578 Vps54Q5SPW0 977 aa13.66□□□□□ -0.22
Vps54-202ENSMUST00000109578 SnrkQ8VDU5 748 aa13.66□□□□□ -0.22
Vps54-202ENSMUST00000109578 Col15a1O35206 1367 aa13.66□□□□□ -0.22
Vps54-202ENSMUST00000109578 Ncbp1Q3UYV9 790 aaKnown RBP13.65□□□□□ -0.22
Vps54-202ENSMUST00000109578 Psma5Q9Z2U1 241 aaKnown RBP13.65□□□□□ -0.22
Vps54-202ENSMUST00000109578 Wdr78E9PYY5 807 aa13.65□□□□□ -0.22
Vps54-202ENSMUST00000109578 CebpzP53569 1052 aaKnown RBP13.65□□□□□ -0.22
Vps54-202ENSMUST00000109578 Ddx17Q501J6 650 aaKnown RBP13.65□□□□□ -0.22
Vps54-202ENSMUST00000109578 Pus3Q9JI38 481 aa13.65□□□□□ -0.22
Vps54-202ENSMUST00000109578 Mybbp1aQ7TPV4 1344 aaKnown RBP13.65□□□□□ -0.22
Vps54-202ENSMUST00000109578 Ubash3aQ3V3E1 624 aa13.65□□□□□ -0.22
Vps54-202ENSMUST00000109578 StrbpQ91WM1 672 aaKnown RBP13.65□□□□□ -0.22
Vps54-202ENSMUST00000109578 AppP12023 770 aa13.64□□□□□ -0.23
Vps54-202ENSMUST00000109578 GnpatP98192 678 aa13.64□□□□□ -0.23
Vps54-202ENSMUST00000109578 Nlrp9bQ66X22 1003 aa13.64□□□□□ -0.23
Vps54-202ENSMUST00000109578 Chmp7Q8R1T1 451 aa13.64□□□□□ -0.23
Vps54-202ENSMUST00000109578 Rbm42Q91V81 474 aaKnown RBP13.64□□□□□ -0.23
Vps54-202ENSMUST00000109578 PdcQ9QW08 244 aa13.64□□□□□ -0.23
Vps54-202ENSMUST00000109578 Alpk3Q924C5 1678 aa13.64□□□□□ -0.23
Vps54-202ENSMUST00000109578 Ddx46Q569Z5 1032 aaKnown RBP13.64□□□□□ -0.23
Vps54-202ENSMUST00000109578 Rnf20Q5DTM8 973 aa13.64□□□□□ -0.23
Vps54-202ENSMUST00000109578 ThemisQ8BGW0 636 aa13.64□□□□□ -0.23
Vps54-202ENSMUST00000109578 Rbbp8nlA2ABX0 614 aa13.64□□□□□ -0.23
Vps54-202ENSMUST00000109578 Zkscan7E9PVW1 718 aa13.64□□□□□ -0.23
Vps54-202ENSMUST00000109578 Rps6ka5Q8C050 863 aa13.64□□□□□ -0.23
Vps54-202ENSMUST00000109578 Inpp5bQ8K337 993 aa13.64□□□□□ -0.23
Vps54-202ENSMUST00000109578 Kansl3A2RSY1 903 aaKnown RBP13.64□□□□□ -0.23
Vps54-202ENSMUST00000109578 TrhQ62361 256 aa13.64□□□□□ -0.23
Vps54-202ENSMUST00000109578 Iffo2Q8R2V2 512 aa13.64□□□□□ -0.23
Vps54-202ENSMUST00000109578 Tyro3P55144 880 aa13.63□□□□□ -0.23
Vps54-202ENSMUST00000109578 Lins1Q3U1D0 764 aa13.63□□□□□ -0.23
Vps54-202ENSMUST00000109578 Zranb3Q6NZP1 1069 aa13.63□□□□□ -0.23
Vps54-202ENSMUST00000109578 OptnQ8K3K8 584 aa13.63□□□□□ -0.23
Vps54-202ENSMUST00000109578 ZwintQ9CQU5 252 aa13.63□□□□□ -0.23
Vps54-202ENSMUST00000109578 Iqsec3Q3TES0 1195 aa13.63□□□□□ -0.23
Vps54-202ENSMUST00000109578 Q8C5K5 320 aa13.63□□□□□ -0.23
Vps54-202ENSMUST00000109578 Dis3l2Q8CI75 870 aaKnown RBP13.63□□□□□ -0.23
Vps54-202ENSMUST00000109578 Fam84aQ9D650 292 aa13.63□□□□□ -0.23
Vps54-202ENSMUST00000109578 BcorQ8CGN4 1759 aa13.63□□□□□ -0.23
Vps54-202ENSMUST00000109578 Mctp1E9PV86 951 aa13.63□□□□□ -0.23
Vps54-202ENSMUST00000109578 EzrP26040 586 aaKnown RBP13.63□□□□□ -0.23
Vps54-202ENSMUST00000109578 Ifit1Q64282 463 aa13.63□□□□□ -0.23
Vps54-202ENSMUST00000109578 Cep57l1Q8VDS7 400 aa13.63□□□□□ -0.23
Vps54-202ENSMUST00000109578 TnmdQ9EP64 317 aa13.63□□□□□ -0.23
Vps54-202ENSMUST00000109578 Robo1O89026 1612 aa13.62□□□□□ -0.23
Vps54-202ENSMUST00000109578 Ppp6r1Q7TSI3 856 aa13.62□□□□□ -0.23
Vps54-202ENSMUST00000109578 Ythdc1E9Q5K9 736 aaKnown RBP13.62□□□□□ -0.23
Vps54-202ENSMUST00000109578 Nrbp1Q99J45 535 aa13.62□□□□□ -0.23
Vps54-202ENSMUST00000109578 Wdr33Q8K4P0 1330 aaKnown RBP13.62□□□□□ -0.23
Vps54-202ENSMUST00000109578 Ercc3P49135 783 aa13.62□□□□□ -0.23
Vps54-202ENSMUST00000109578 Rassf8Q8CJ96 419 aa13.62□□□□□ -0.23
Vps54-202ENSMUST00000109578 Phkg2Q9DB30 406 aa13.62□□□□□ -0.23
Vps54-202ENSMUST00000109578 NpeppsQ11011 920 aa13.61□□□□□ -0.23
Vps54-202ENSMUST00000109578 Kank4Q6P9J5 1016 aa13.61□□□□□ -0.23
Vps54-202ENSMUST00000109578 Oxsr1Q6P9R2 527 aa13.61□□□□□ -0.23
Vps54-202ENSMUST00000109578 Ano1Q8BHY3 960 aa13.61□□□□□ -0.23
Vps54-202ENSMUST00000109578 Aox1O54754 1333 aa13.61□□□□□ -0.23
Vps54-202ENSMUST00000109578 Tns3Q5SSZ5 1440 aa13.61□□□□□ -0.23
Vps54-202ENSMUST00000109578 TnrQ8BYI9 1358 aa13.61□□□□□ -0.23
Vps54-202ENSMUST00000109578 Plcd1Q8R3B1 756 aa13.61□□□□□ -0.23
Vps54-202ENSMUST00000109578 Gys2Q8VCB3 704 aa13.61□□□□□ -0.23
Vps54-202ENSMUST00000109578 Bicd2Q921C5 820 aa13.61□□□□□ -0.23
Vps54-202ENSMUST00000109578 MypnQ5DTJ9 1315 aa13.61□□□□□ -0.23
Vps54-202ENSMUST00000109578 Ccdc162pQ0VG85 912 aa13.61□□□□□ -0.23
Vps54-202ENSMUST00000109578 Soga3Q6NZL0 945 aa13.61□□□□□ -0.23
Vps54-202ENSMUST00000109578 Lrrfip2Q91WK0 415 aa13.61□□□□□ -0.23
Vps54-202ENSMUST00000109578 Irgm2A0A140LIF8 407 aa13.61□□□□□ -0.23
Vps54-202ENSMUST00000109578 Stat1P42225 749 aa13.61□□□□□ -0.23
Vps54-202ENSMUST00000109578 CrebrfQ8CDG5 640 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms