RNA–Protein interactions for RNA: ENSMUST00000106653.3

Usp47-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Usp47, Length 5,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-201ENSMUST00000106653 Stx8O88983 236 aa19.37■□□□□ 0.69
Usp47-201ENSMUST00000106653 Tbc1d2bQ3U0J8 965 aa19.37■□□□□ 0.69
Usp47-201ENSMUST00000106653 Ift57Q8BXG3 429 aa19.37■□□□□ 0.69
Usp47-201ENSMUST00000106653 St5Q924W7 1134 aa19.37■□□□□ 0.69
Usp47-201ENSMUST00000106653 Arhgef11Q68FM7 1552 aa19.37■□□□□ 0.69
Usp47-201ENSMUST00000106653 Gcc2Q8CHG3 1679 aa19.36■□□□□ 0.69
Usp47-201ENSMUST00000106653 Rbm19Q8R3C6 952 aaKnown RBP19.36■□□□□ 0.69
Usp47-201ENSMUST00000106653 Rad50P70388 1312 aa19.36■□□□□ 0.69
Usp47-201ENSMUST00000106653 Ttc21aQ8C0S4 1314 aa19.36■□□□□ 0.69
Usp47-201ENSMUST00000106653 Hvcn1Q3U2S8 269 aa19.36■□□□□ 0.69
Usp47-201ENSMUST00000106653 Mrvi1Q9WUX5 899 aaKnown RBP19.36■□□□□ 0.69
Usp47-201ENSMUST00000106653 Fam135bQ9DAI6 1403 aa19.36■□□□□ 0.69
Usp47-201ENSMUST00000106653 Liat1Q810M6 228 aa19.35■□□□□ 0.69
Usp47-201ENSMUST00000106653 Nphp3Q7TNH6 1325 aa19.35■□□□□ 0.69
Usp47-201ENSMUST00000106653 Bin1O08539 588 aaKnown RBP19.35■□□□□ 0.69
Usp47-201ENSMUST00000106653 Tceanc2Q8R2M0 207 aa19.35■□□□□ 0.69
Usp47-201ENSMUST00000106653 Kdm5cP41230 1554 aa19.35■□□□□ 0.69
Usp47-201ENSMUST00000106653 Ppm1eQ80TL0 749 aa19.35■□□□□ 0.69
Usp47-201ENSMUST00000106653 Bicc1Q99MQ1 977 aaKnown RBP19.35■□□□□ 0.69
Usp47-201ENSMUST00000106653 Ier5O89113 308 aa19.35■□□□□ 0.69
Usp47-201ENSMUST00000106653 Triml1Q8BVP1 470 aa19.35■□□□□ 0.69
Usp47-201ENSMUST00000106653 Hfm1D3Z4R1 1434 aa19.35■□□□□ 0.69
Usp47-201ENSMUST00000106653 Ift74Q8BKE9 600 aa19.35■□□□□ 0.69
Usp47-201ENSMUST00000106653 4931400O07RikQ9D4M5 137 aa19.35■□□□□ 0.69
Usp47-201ENSMUST00000106653 Zbtb43Q9DAI4 467 aa19.35■□□□□ 0.69
Usp47-201ENSMUST00000106653 WtapQ9ER69 396 aa19.35■□□□□ 0.69
Usp47-201ENSMUST00000106653 Slc4a4O88343 1079 aa19.34■□□□□ 0.69
Usp47-201ENSMUST00000106653 Gm10093D3YYI8 482 aa19.34■□□□□ 0.69
Usp47-201ENSMUST00000106653 Hdac1O09106 482 aaKnown RBP19.34■□□□□ 0.69
Usp47-201ENSMUST00000106653 Sdc2P43407 202 aa19.34■□□□□ 0.69
Usp47-201ENSMUST00000106653 Bms1Q6PGF5 1284 aaKnown RBP19.34■□□□□ 0.69
Usp47-201ENSMUST00000106653 U2af1l4Q8BGJ9 220 aa19.34■□□□□ 0.69
Usp47-201ENSMUST00000106653 Srgap1Q91Z69 1062 aa19.34■□□□□ 0.69
Usp47-201ENSMUST00000106653 Slx4ipQ9D7Y9 413 aa19.34■□□□□ 0.69
Usp47-201ENSMUST00000106653 Ddb1Q3U1J4 1140 aaKnown RBP19.34■□□□□ 0.69
Usp47-201ENSMUST00000106653 Trim25Q61510 634 aaKnown RBP19.34■□□□□ 0.69
Usp47-201ENSMUST00000106653 Tmem143Q8VD26 458 aa19.34■□□□□ 0.69
Usp47-201ENSMUST00000106653 Rdm1Q9CQK3 281 aa19.34■□□□□ 0.69
Usp47-201ENSMUST00000106653 MthfsQ9D110 203 aa19.34■□□□□ 0.69
Usp47-201ENSMUST00000106653 Slc1a4O35874 532 aa19.33■□□□□ 0.69
Usp47-201ENSMUST00000106653 Cacna2d4Q5RJF7 1116 aa19.33■□□□□ 0.69
Usp47-201ENSMUST00000106653 Ankrd1Q9CR42 319 aa19.33■□□□□ 0.69
Usp47-201ENSMUST00000106653 Kmt5bQ3U8K7 883 aa19.33■□□□□ 0.68
Usp47-201ENSMUST00000106653 Abcf1Q6P542 837 aaKnown RBP19.33■□□□□ 0.68
Usp47-201ENSMUST00000106653 Emilin2Q8K482 1074 aa19.33■□□□□ 0.68
Usp47-201ENSMUST00000106653 Krt23Q99PS0 422 aa19.33■□□□□ 0.68
Usp47-201ENSMUST00000106653 Mipol1Q9D9F8 279 aa19.33■□□□□ 0.68
Usp47-201ENSMUST00000106653 Lmo7E9PYF4 1699 aaKnown RBP19.33■□□□□ 0.68
Usp47-201ENSMUST00000106653 Zscan29E9Q5B4 869 aa19.32■□□□□ 0.68
Usp47-201ENSMUST00000106653 Fam170aQ66LM6 333 aa19.32■□□□□ 0.68
Usp47-201ENSMUST00000106653 Nsd3Q6P2L6 1439 aa19.32■□□□□ 0.68
Usp47-201ENSMUST00000106653 Smtnl1Q99LM3 459 aa19.32■□□□□ 0.68
Usp47-201ENSMUST00000106653 Olr1Q9EQ09 363 aa19.32■□□□□ 0.68
Usp47-201ENSMUST00000106653 Cnnm2Q3TWN3 875 aa19.32■□□□□ 0.68
Usp47-201ENSMUST00000106653 MicalclQ9D5U9 680 aa19.32■□□□□ 0.68
Usp47-201ENSMUST00000106653 Zkscan7E9PVW1 718 aa19.32■□□□□ 0.68
Usp47-201ENSMUST00000106653 DlatQ8BMF4 642 aa19.32■□□□□ 0.68
Usp47-201ENSMUST00000106653 DymQ8CHY3 669 aa19.32■□□□□ 0.68
Usp47-201ENSMUST00000106653 Adcy5P84309 1262 aa19.31■□□□□ 0.68
Usp47-201ENSMUST00000106653 PrkcshO08795 521 aa19.31■□□□□ 0.68
Usp47-201ENSMUST00000106653 CalcaP70160 136 aa19.31■□□□□ 0.68
Usp47-201ENSMUST00000106653 Q4VA45 678 aa19.31■□□□□ 0.68
Usp47-201ENSMUST00000106653 Cadps2Q8BYR5 1297 aa19.31■□□□□ 0.68
Usp47-201ENSMUST00000106653 Hs2st1Q8R3H7 356 aa19.31■□□□□ 0.68
Usp47-201ENSMUST00000106653 Tbc1d8bA3KGB4 1114 aa19.31■□□□□ 0.68
Usp47-201ENSMUST00000106653 CrklP47941 303 aa19.31■□□□□ 0.68
Usp47-201ENSMUST00000106653 SympkQ80X82 1284 aa19.31■□□□□ 0.68
Usp47-201ENSMUST00000106653 Ptcd1Q8C2E4 695 aaKnown RBP19.31■□□□□ 0.68
Usp47-201ENSMUST00000106653 RestQ8VIG1 1082 aa19.31■□□□□ 0.68
Usp47-201ENSMUST00000106653 Dydc2Q9D3X8 139 aa19.31■□□□□ 0.68
Usp47-201ENSMUST00000106653 Dapk3O54784 448 aa19.31■□□□□ 0.68
Usp47-201ENSMUST00000106653 Dnm1P39053 867 aa19.31■□□□□ 0.68
Usp47-201ENSMUST00000106653 SphkapQ6NSW3 1687 aa19.31■□□□□ 0.68
Usp47-201ENSMUST00000106653 Usp5P56399 858 aaKnown RBP19.3■□□□□ 0.68
Usp47-201ENSMUST00000106653 Nucb1Q02819 459 aaKnown RBP19.3■□□□□ 0.68
Usp47-201ENSMUST00000106653 Rapgef3Q8VCC8 918 aa19.3■□□□□ 0.68
Usp47-201ENSMUST00000106653 Terf1P70371 421 aa19.3■□□□□ 0.68
Usp47-201ENSMUST00000106653 Prm3Q62100 101 aa19.3■□□□□ 0.68
Usp47-201ENSMUST00000106653 Cc2d1bQ8BRN9 848 aa19.3■□□□□ 0.68
Usp47-201ENSMUST00000106653 Letm1Q9Z2I0 738 aa19.3■□□□□ 0.68
Usp47-201ENSMUST00000106653 Ktn1Q61595 1327 aaKnown RBP19.3■□□□□ 0.68
Usp47-201ENSMUST00000106653 Spag5Q7TME2 1165 aa19.3■□□□□ 0.68
Usp47-201ENSMUST00000106653 Lmod1Q8BVA4 595 aa19.3■□□□□ 0.68
Usp47-201ENSMUST00000106653 Map9Q3TRR0 646 aa19.29■□□□□ 0.68
Usp47-201ENSMUST00000106653 Q9D5Q8 446 aa19.29■□□□□ 0.68
Usp47-201ENSMUST00000106653 Ttc12Q8BW49 704 aa19.29■□□□□ 0.68
Usp47-201ENSMUST00000106653 Baiap2l1Q9DBJ3 514 aa19.29■□□□□ 0.68
Usp47-201ENSMUST00000106653 Dennd3A2RT67 1274 aa19.29■□□□□ 0.68
Usp47-201ENSMUST00000106653 NcapgE9PWG6 1004 aa19.29■□□□□ 0.68
Usp47-201ENSMUST00000106653 Cnga2Q62398 664 aa19.29■□□□□ 0.68
Usp47-201ENSMUST00000106653 Larp6Q8BN59 492 aa19.29■□□□□ 0.68
Usp47-201ENSMUST00000106653 Nlgn1Q99K10 843 aa19.29■□□□□ 0.68
Usp47-201ENSMUST00000106653 Gtf2a1Q99PM3 378 aa19.29■□□□□ 0.68
Usp47-201ENSMUST00000106653 Nfxl1E9Q8I7 918 aaKnown RBP19.29■□□□□ 0.68
Usp47-201ENSMUST00000106653 Sil1Q9EPK6 465 aa19.29■□□□□ 0.68
Usp47-201ENSMUST00000106653 Prkab2Q6PAM0 271 aa19.28■□□□□ 0.68
Usp47-201ENSMUST00000106653 Ppp1r10Q80W00 888 aaKnown RBP19.28■□□□□ 0.68
Usp47-201ENSMUST00000106653 Vps16Q920Q4 839 aa19.28■□□□□ 0.68
Usp47-201ENSMUST00000106653 Rad17Q6NXW6 688 aa19.28■□□□□ 0.68
Usp47-201ENSMUST00000106653 Nek11Q8C0Q4 628 aa19.28■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 8.9 ms