RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Chmp7Q8R1T1 451 aa11.17□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Rbm5Q91YE7 815 aaKnown RBP11.17□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Nip7Q9CXK8 180 aaKnown RBP11.17□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Znf697Q569E7 569 aa11.16□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Jarid2Q62315 1234 aa11.16□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Taok2Q6ZQ29 1240 aa11.16□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Cnot7Q60809 285 aa11.15□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Skor1Q8BX46 964 aa11.15□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Dbndd1Q9CZ00 160 aa11.15□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Dpf1Q9QX66 387 aa11.15□□□□□ -0.62
Scn8a-202ENSMUST00000096198 SrcapA0A087WQ44 3271 aa11.15□□□□□ -0.62
Scn8a-202ENSMUST00000096198 Tiam2Q6ZPF3 1715 aa11.15□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Cyp2c23E9Q5K4 494 aa11.14□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Defa-rs2P17534 91 aa11.14□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Tmc4Q7TQ65 694 aa11.14□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Cracr2bQ80ZJ8 394 aa11.14□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Gjb1P28230 283 aa11.13□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Stard8Q8K031 1019 aa11.13□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Ascc2Q91WR3 749 aa11.13□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Efcab2Q9CQ46 164 aa11.13□□□□□ -0.63
Scn8a-202ENSMUST00000096198 IbtkQ6ZPR6 1352 aaKnown RBP11.13□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Prr5lA2AVJ5 370 aa11.12□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Ccdc188F6WEU2 249 aa11.12□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Hap1O35668 628 aa11.12□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Abhd15Q5F2F2 459 aa11.12□□□□□ -0.63
Scn8a-202ENSMUST00000096198 PigbQ9JJQ0 542 aa11.12□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Zbtb12Q9Z150 459 aa11.12□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Unc80Q8BLN6 3261 aa11.12□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Ddx60E9PZQ1 1711 aa11.12□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Kiaa0100Q5SYL3 2234 aa11.11□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Ttll7A4Q9F0 912 aa11.11□□□□□ -0.63
Scn8a-202ENSMUST00000096198 MpripP97434 1024 aa11.11□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Pde4dQ01063 747 aa11.11□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Specc1Q5SXY1 1067 aa11.11□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Glis3Q6XP49 780 aa11.11□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Ecm29Q6PDI5 1840 aa11.11□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Ubr2Q6WKZ8 1755 aa11.11□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Eddm13E9Q7F5 164 aa11.1□□□□□ -0.63
Scn8a-202ENSMUST00000096198 CltaO08585 235 aa11.1□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Eif4a2P10630 407 aa11.1□□□□□ -0.63
Scn8a-202ENSMUST00000096198 PomkQ3TUA9 349 aa11.1□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Tcerg1Q8CGF7 1100 aaKnown RBP11.1□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Tomm70Q9CZW5 611 aa11.1□□□□□ -0.63
Scn8a-202ENSMUST00000096198 MsraQ9D6Y7 233 aa11.1□□□□□ -0.63
Scn8a-202ENSMUST00000096198 EhhadhQ9DBM2 718 aa11.1□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Znf704Q9ERQ3 566 aa11.1□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Csf2raQ00941 388 aa11.09□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Slain1Q68FF7 579 aa11.09□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Atxn2lQ7TQH0 1049 aaKnown RBP11.09□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Tmem67Q8BR76 992 aa11.09□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Col11a1Q61245 1804 aa11.09□□□□□ -0.63
Scn8a-202ENSMUST00000096198 Kntc1Q8C3Y4 2207 aa11.08□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Bdp1Q571C7 2467 aa11.08□□□□□ -0.64
Scn8a-202ENSMUST00000096198 AlyrefO08583 255 aaKnown RBP11.08□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Psmd1Q3TXS7 953 aa11.08□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Slf2Q6P9P0 1278 aa11.08□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Slc4a7Q8BTY2 1034 aa11.08□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Sgpl1Q8R0X7 568 aa11.08□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Aox2Q5SGK3 1345 aa11.08□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Mybbp1aQ7TPV4 1344 aaKnown RBP11.08□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Lama4P97927 1816 aa11.07□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Stox1B2RQL2 990 aa11.07□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Pcsk7Q61139 770 aa11.07□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Esco1Q69Z69 843 aa11.07□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Ubxn11Q9D572 484 aa11.07□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Rapgef4Q9EQZ6 1011 aa11.07□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Apbb1Q9QXJ1 710 aa11.07□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Tll2Q9WVM6 1012 aa11.07□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Tbc1d8Q9Z1A9 1134 aa11.07□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Ltn1Q6A009 1767 aa11.07□□□□□ -0.64
Scn8a-202ENSMUST00000096198 MetP16056 1379 aa11.06□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Rnf19bA2A7Q9 732 aa11.06□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Atp6v0a2P15920 856 aa11.06□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Ttll12Q3UDE2 639 aa11.06□□□□□ -0.64
Scn8a-202ENSMUST00000096198 MylipQ8BM54 445 aa11.06□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Myoz2Q9JJW5 264 aa11.06□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Gon4lQ9DB00 2260 aa11.05□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Slc4a5E9Q3M5 1116 aa11.05□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Ccer2J3QPU5 274 aa11.05□□□□□ -0.64
Scn8a-202ENSMUST00000096198 LeprP48356 1162 aa11.05□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Sox1P53783 391 aa11.05□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Adam1aQ60813 791 aa11.05□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Kank1E9Q238 1360 aa11.04□□□□□ -0.64
Scn8a-202ENSMUST00000096198 GabreA2AMW3 916 aa11.04□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Dctn1O08788 1281 aa11.04□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Ifit1bl2Q3U687 466 aa11.04□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Tll1Q62381 1013 aa11.04□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Trpv1Q704Y3 839 aa11.04□□□□□ -0.64
Scn8a-202ENSMUST00000096198 WaslQ91YD9 501 aa11.04□□□□□ -0.64
Scn8a-202ENSMUST00000096198 NgdnQ9DB96 315 aaKnown RBP11.04□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Ralgps2Q9ERD6 590 aa11.04□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Pde4bB1AWC9 736 aa11.03□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Trmt1Q3TX08 663 aa11.03□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Strip1Q8C079 837 aa11.03□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Plekhg6Q8R0J1 787 aa11.03□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Susd3Q9D176 269 aa11.03□□□□□ -0.64
Scn8a-202ENSMUST00000096198 PrxO55103 1391 aa11.03□□□□□ -0.64
Scn8a-202ENSMUST00000096198 Snap23O09044 210 aa11.02□□□□□ -0.65
Scn8a-202ENSMUST00000096198 Psmd14O35593 310 aa11.02□□□□□ -0.65
Scn8a-202ENSMUST00000096198 Atp6v1aP50516 617 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms