RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Ccdc66Q6NS45 935 aa9.74□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Frmd3Q8BHD4 595 aa9.74□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Tomm22Q9CPQ3 142 aa9.74□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Asxl2Q8BZ32 1370 aa9.74□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Snap23O09044 210 aa9.73□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Ier5O89113 308 aa9.73□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Cnnm3Q32NY4 713 aa9.73□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Esyt1Q3U7R1 1092 aaKnown RBP9.73□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Dydc1Q9D9T0 175 aa9.73□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Msh6P54276 1358 aaKnown RBP9.73□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Disp3A3KFU9 1347 aa9.73□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Ppfia1B2RXQ2 1266 aa9.73□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Evi5lH3BKQ3 813 aa9.73□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Taf3Q5HZG4 932 aa9.73□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Dixdc1Q80Y83 711 aa9.73□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Brf1Q8CFK2 676 aa9.73□□□□□ -0.85
Cdc40-201ENSMUST00000044166 AatfQ9JKX4 526 aaKnown RBP9.73□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Ddx46Q569Z5 1032 aaKnown RBP9.73□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Slc4a10Q5DTL9 1118 aa9.73□□□□□ -0.85
Cdc40-201ENSMUST00000044166 TnmdQ9EP64 317 aa9.73□□□□□ -0.85
Cdc40-201ENSMUST00000044166 SufuQ9Z0P7 484 aa9.73□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Polr3gQ6NXY9 223 aa9.72□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Slc20a2Q80UP8 656 aa9.72□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Tceal9Q9DD24 104 aa9.72□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Atp8b3Q6UQ17 1335 aa9.72□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Mybbp1aQ7TPV4 1344 aaKnown RBP9.72□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Tet3Q8BG87 1668 aa9.72□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Serpinb6bO08804 377 aa9.72□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Cdk4P30285 303 aa9.72□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Psme1P97371 249 aa9.72□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Ifit2Q64112 472 aa9.72□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Ifi35Q9D8C4 286 aa9.72□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Ndufa8Q9DCJ5 172 aa9.72□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Nfe2l3Q9WTM4 660 aa9.72□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Atf5O70191 283 aa9.72□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Afap1Q80YS6 731 aa9.72□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Bmp2kQ91Z96 1138 aa9.72□□□□□ -0.85
Cdc40-201ENSMUST00000044166 F2rP30558 430 aa9.71□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Nol10Q5RJG1 687 aaKnown RBP9.71□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Phc3Q8CHP6 981 aa9.71□□□□□ -0.85
Cdc40-201ENSMUST00000044166 4930548H24RikQ9D496 437 aa9.71□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Zeb2Q9R0G7 1215 aa9.71□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Ubn2Q80WC1 1314 aa9.71□□□□□ -0.85
Cdc40-201ENSMUST00000044166 Ms4a1P19437 291 aa9.71□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Leo1Q5XJE5 667 aa9.71□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Myo5bP21271 1818 aa9.71□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Chpf2Q3UU43 768 aa9.7□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Ddx11Q6AXC6 880 aa9.7□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Sgsm2Q80U12 1005 aa9.7□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Sh3bgrQ9WUZ7 214 aa9.7□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Itsn1Q9Z0R4 1714 aa9.7□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Ercc6l2Q9JIM3 1537 aa9.7□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Mctp1E9PV86 951 aa9.7□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Zfp113Q8C689 439 aa9.7□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Med1Q925J9 1575 aa9.7□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Eya1P97767 591 aa9.7□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Ccdc40Q8BI79 1192 aa9.7□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Cdca7lQ922M5 438 aa9.7□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Nrbp1Q99J45 535 aa9.7□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Aox1O54754 1333 aa9.7□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Fmnl2A2APV2 1086 aa9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 TrdnE9Q9K5 693 aa9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Eef2kO08796 724 aa9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Rtel1Q0VGM9 1203 aa9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Bloc1s2Q9CWG9 143 aa9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Krt85Q9Z2T6 507 aa9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Znf335A2A5K6 1337 aa9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 CemipQ8BI06 1361 aa9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Slit2Q9R1B9 1521 aa9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Zc3h13E9Q784 1729 aaKnown RBP9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Parp14Q2EMV9 1817 aa9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Tnrc6bQ8BKI2 1810 aaKnown RBP9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Zscan29E9Q5B4 869 aa9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Ano6Q6P9J9 911 aa9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Zfp397Q7TNK4 527 aa9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Cep57l1Q8VDS7 400 aa9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Psma5Q9Z2U1 241 aaKnown RBP9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Hmx1O70218 332 aa9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Cep63Q3UPP8 700 aa9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Txndc2Q6P902 515 aa9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Otud6bQ8K2H2 294 aa9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Nlrp3Q8R4B8 1033 aa9.69□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Pnpla7A2AJ88 1352 aa9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Q32P12 615 aa9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 EspnlQ3UYR4 1005 aa9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Ccz1Q8C1Y8 480 aa9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Q8VDP2 222 aa9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Atg3Q9CPX6 314 aa9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Arl10Q9QXJ4 243 aa9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Larp1bA0A0A6YXJ7 370 aaKnown RBP9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Rbm8a2A0A0N4SUH6 174 aa9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Kcnb2A6H8H5 907 aa9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 MyclP10166 368 aa9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Pkp1P97350 728 aaKnown RBP9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 R3hcc1Q8BSI6 488 aa9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Bicd2Q921C5 820 aa9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Sirt1Q923E4 737 aa9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Rbm8aQ9CWZ3 174 aa9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Cep83Q9D5R3 692 aa9.68□□□□□ -0.86
Cdc40-201ENSMUST00000044166 Cnksr1A2A9K7 700 aa9.68□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms