RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Plcd3Q8K2J0 785 aa15.95■□□□□ 0.14
Nup88-201ENSMUST00000035283 Nlrp3Q8R4B8 1033 aa15.95■□□□□ 0.14
Nup88-201ENSMUST00000035283 Bloc1s2Q9CWG9 143 aa15.95■□□□□ 0.14
Nup88-201ENSMUST00000035283 AceP09470 1312 aa15.95■□□□□ 0.14
Nup88-201ENSMUST00000035283 Arfgef2A2A5R2 1792 aa15.95■□□□□ 0.14
Nup88-201ENSMUST00000035283 Gsdma3Q5Y4Y6 464 aa15.94■□□□□ 0.14
Nup88-201ENSMUST00000035283 Jarid2Q62315 1234 aa15.94■□□□□ 0.14
Nup88-201ENSMUST00000035283 Zpr1Q62384 459 aa15.94■□□□□ 0.14
Nup88-201ENSMUST00000035283 Ttc27Q8CD92 847 aa15.94■□□□□ 0.14
Nup88-201ENSMUST00000035283 Nop14Q8R3N1 860 aaKnown RBP15.94■□□□□ 0.14
Nup88-201ENSMUST00000035283 Mybbp1aQ7TPV4 1344 aaKnown RBP15.94■□□□□ 0.14
Nup88-201ENSMUST00000035283 Scn7aB1AYL1 1681 aa15.94■□□□□ 0.14
Nup88-201ENSMUST00000035283 Card6E9PWH2 1175 aa15.94■□□□□ 0.14
Nup88-201ENSMUST00000035283 Ctdnep1Q3TP92 244 aa15.94■□□□□ 0.14
Nup88-201ENSMUST00000035283 Nfatc2ipO09130 412 aa15.93■□□□□ 0.14
Nup88-201ENSMUST00000035283 MecomP14404 1042 aa15.93■□□□□ 0.14
Nup88-201ENSMUST00000035283 Btbd11Q6GQW0 1109 aa15.93■□□□□ 0.14
Nup88-201ENSMUST00000035283 Dixdc1Q80Y83 711 aa15.93■□□□□ 0.14
Nup88-201ENSMUST00000035283 Slc26a8Q8R0C3 999 aa15.93■□□□□ 0.14
Nup88-201ENSMUST00000035283 Tpm3P21107 285 aaKnown RBP15.93■□□□□ 0.14
Nup88-201ENSMUST00000035283 Ubash3aQ3V3E1 624 aa15.93■□□□□ 0.14
Nup88-201ENSMUST00000035283 CtifQ6PEE2 600 aaKnown RBP15.93■□□□□ 0.14
Nup88-201ENSMUST00000035283 Bicc1Q99MQ1 977 aaKnown RBP15.93■□□□□ 0.14
Nup88-201ENSMUST00000035283 Aox1O54754 1333 aa15.93■□□□□ 0.14
Nup88-201ENSMUST00000035283 Dlg5E9Q9R9 1921 aa15.92■□□□□ 0.14
Nup88-201ENSMUST00000035283 Cdkn1cP49919 348 aa15.92■□□□□ 0.14
Nup88-201ENSMUST00000035283 Atf7Q8R0S1 413 aa15.92■□□□□ 0.14
Nup88-201ENSMUST00000035283 Plcd1Q8R3B1 756 aa15.92■□□□□ 0.14
Nup88-201ENSMUST00000035283 Ifi35Q9D8C4 286 aa15.92■□□□□ 0.14
Nup88-201ENSMUST00000035283 Ppp6r1Q7TSI3 856 aa15.92■□□□□ 0.14
Nup88-201ENSMUST00000035283 Ccz1Q8C1Y8 480 aa15.92■□□□□ 0.14
Nup88-201ENSMUST00000035283 Amotl1Q9D4H4 968 aa15.92■□□□□ 0.14
Nup88-201ENSMUST00000035283 RdxP26043 583 aaKnown RBP15.91■□□□□ 0.14
Nup88-201ENSMUST00000035283 Cdk4P30285 303 aa15.91■□□□□ 0.14
Nup88-201ENSMUST00000035283 Rps6kb1Q8BSK8 525 aa15.91■□□□□ 0.14
Nup88-201ENSMUST00000035283 Bag3Q9JLV1 577 aaKnown RBP15.91■□□□□ 0.14
Nup88-201ENSMUST00000035283 Atp8b3Q6UQ17 1335 aa15.91■□□□□ 0.14
Nup88-201ENSMUST00000035283 Cep57l1Q8VDS7 400 aa15.91■□□□□ 0.14
Nup88-201ENSMUST00000035283 Tlcd1Q99JT6 247 aa15.91■□□□□ 0.14
Nup88-201ENSMUST00000035283 Krt85Q9Z2T6 507 aa15.91■□□□□ 0.14
Nup88-201ENSMUST00000035283 Col1a2Q01149 1372 aa15.91■□□□□ 0.14
Nup88-201ENSMUST00000035283 Frmd3Q8BHD4 595 aa15.9■□□□□ 0.14
Nup88-201ENSMUST00000035283 Arid5bQ8BM75 1188 aaKnown RBP15.9■□□□□ 0.14
Nup88-201ENSMUST00000035283 Bicd2Q921C5 820 aa15.9■□□□□ 0.14
Nup88-201ENSMUST00000035283 ZwintQ9CQU5 252 aa15.9■□□□□ 0.14
Nup88-201ENSMUST00000035283 Sh3bgrQ9WUZ7 214 aa15.9■□□□□ 0.14
Nup88-201ENSMUST00000035283 Psma5Q9Z2U1 241 aaKnown RBP15.9■□□□□ 0.14
Nup88-201ENSMUST00000035283 1700113H08RikE9Q9Q5 327 aa15.9■□□□□ 0.14
Nup88-201ENSMUST00000035283 Nup153E9Q3G8 1462 aaKnown RBP15.9■□□□□ 0.14
Nup88-201ENSMUST00000035283 Mst1rQ62190 1378 aa15.89■□□□□ 0.13
Nup88-201ENSMUST00000035283 FosbP13346 338 aa15.89■□□□□ 0.13
Nup88-201ENSMUST00000035283 Tsen34Q8BMZ5 316 aa15.89■□□□□ 0.13
Nup88-201ENSMUST00000035283 Chd2E9PZM4 1827 aaKnown RBP15.89■□□□□ 0.13
Nup88-201ENSMUST00000035283 Ppfia3P60469 1194 aa15.88■□□□□ 0.13
Nup88-201ENSMUST00000035283 Ano1Q8BHY3 960 aa15.88■□□□□ 0.13
Nup88-201ENSMUST00000035283 Dnajc5gQ8C632 165 aa15.88■□□□□ 0.13
Nup88-201ENSMUST00000035283 GckrQ91X44 587 aa15.88■□□□□ 0.13
Nup88-201ENSMUST00000035283 Hmgn5Q9JL35 406 aa15.88■□□□□ 0.13
Nup88-201ENSMUST00000035283 Atp10bB1AWN4 1474 aa15.88■□□□□ 0.13
Nup88-201ENSMUST00000035283 Kiaa0232Q80U59 1396 aaKnown RBP15.88■□□□□ 0.13
Nup88-201ENSMUST00000035283 Ap5z1Q3U829 807 aa15.88■□□□□ 0.13
Nup88-201ENSMUST00000035283 Pde3bQ61409 1100 aa15.88■□□□□ 0.13
Nup88-201ENSMUST00000035283 TrhQ62361 256 aa15.88■□□□□ 0.13
Nup88-201ENSMUST00000035283 Larp1Q6ZQ58 1072 aaKnown RBP15.88■□□□□ 0.13
Nup88-201ENSMUST00000035283 Adam1bQ8R534 806 aa15.88■□□□□ 0.13
Nup88-201ENSMUST00000035283 Srgap1Q91Z69 1062 aa15.88■□□□□ 0.13
Nup88-201ENSMUST00000035283 Bmp2kQ91Z96 1138 aa15.88■□□□□ 0.13
Nup88-201ENSMUST00000035283 Syt10Q9R0N4 523 aa15.88■□□□□ 0.13
Nup88-201ENSMUST00000035283 Dync1i1O88485 628 aa15.87■□□□□ 0.13
Nup88-201ENSMUST00000035283 Grm8P47743 908 aa15.87■□□□□ 0.13
Nup88-201ENSMUST00000035283 Igfbp6P47880 238 aa15.87■□□□□ 0.13
Nup88-201ENSMUST00000035283 Ifit1Q64282 463 aa15.87■□□□□ 0.13
Nup88-201ENSMUST00000035283 Zfp317Q8C0Q5 607 aa15.87■□□□□ 0.13
Nup88-201ENSMUST00000035283 Lmbr1lQ9D1E5 489 aa15.87■□□□□ 0.13
Nup88-201ENSMUST00000035283 Aox4Q3TYQ9 1336 aa15.87■□□□□ 0.13
Nup88-201ENSMUST00000035283 Rnf20Q5DTM8 973 aa15.87■□□□□ 0.13
Nup88-201ENSMUST00000035283 Usp28Q5I043 1051 aa15.87■□□□□ 0.13
Nup88-201ENSMUST00000035283 TfrcQ62351 763 aaKnown RBP15.87■□□□□ 0.13
Nup88-201ENSMUST00000035283 Cnpy2Q9QXT0 182 aa15.87■□□□□ 0.13
Nup88-201ENSMUST00000035283 Iffo2Q8R2V2 512 aa15.86■□□□□ 0.13
Nup88-201ENSMUST00000035283 Mon2Q80TL7 1715 aa15.86■□□□□ 0.13
Nup88-201ENSMUST00000035283 Csrnp1P59054 583 aa15.86■□□□□ 0.13
Nup88-201ENSMUST00000035283 Irf9Q61179 399 aa15.86■□□□□ 0.13
Nup88-201ENSMUST00000035283 Rad17Q6NXW6 688 aa15.86■□□□□ 0.13
Nup88-201ENSMUST00000035283 Ano8Q6PB70 1060 aa15.86■□□□□ 0.13
Nup88-201ENSMUST00000035283 StrbpQ91WM1 672 aaKnown RBP15.86■□□□□ 0.13
Nup88-201ENSMUST00000035283 Pcdhb15Q91Y04 786 aa15.86■□□□□ 0.13
Nup88-201ENSMUST00000035283 Flt4P35917 1363 aa15.85■□□□□ 0.13
Nup88-201ENSMUST00000035283 Alpk3Q924C5 1678 aa15.85■□□□□ 0.13
Nup88-201ENSMUST00000035283 Stat1P42225 749 aa15.85■□□□□ 0.13
Nup88-201ENSMUST00000035283 Ccdc155Q80VJ8 648 aa15.85■□□□□ 0.13
Nup88-201ENSMUST00000035283 Samd1D3YXK1 519 aa15.85■□□□□ 0.13
Nup88-201ENSMUST00000035283 Zscan29E9Q5B4 869 aa15.85■□□□□ 0.13
Nup88-201ENSMUST00000035283 Hspa2P17156 633 aa15.85■□□□□ 0.13
Nup88-201ENSMUST00000035283 Zhx1P70121 873 aa15.85■□□□□ 0.13
Nup88-201ENSMUST00000035283 PsapQ61207 557 aaKnown RBP15.85■□□□□ 0.13
Nup88-201ENSMUST00000035283 SympkQ80X82 1284 aa15.85■□□□□ 0.13
Nup88-201ENSMUST00000035283 CrebrfQ8CDG5 640 aaKnown RBP15.85■□□□□ 0.13
Nup88-201ENSMUST00000035283 TatQ8QZR1 454 aa15.85■□□□□ 0.13
Nup88-201ENSMUST00000035283 Osbpl5Q9ER64 874 aa15.85■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms