RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 GckrQ91X44 587 aa14.72□□□□□ -0.05
Msh6-201ENSMUST00000005503 Hmg20bQ9Z104 317 aa14.72□□□□□ -0.05
Msh6-201ENSMUST00000005503 Ifit1Q64282 463 aa14.72□□□□□ -0.05
Msh6-201ENSMUST00000005503 Lmbrd2Q8C561 694 aa14.72□□□□□ -0.05
Msh6-201ENSMUST00000005503 Myo3aQ8K3H5 1613 aa14.72□□□□□ -0.05
Msh6-201ENSMUST00000005503 Nap1l1P28656 391 aaKnown RBP14.72□□□□□ -0.05
Msh6-201ENSMUST00000005503 Ddit3P35639 168 aa14.72□□□□□ -0.05
Msh6-201ENSMUST00000005503 Zdhhc9P59268 364 aa14.72□□□□□ -0.05
Msh6-201ENSMUST00000005503 Igflr1Q3U4N7 345 aa14.72□□□□□ -0.05
Msh6-201ENSMUST00000005503 ImmtQ8CAQ8 757 aaKnown RBP14.71□□□□□ -0.05
Msh6-201ENSMUST00000005503 AnkarA2RT91 1465 aa14.71□□□□□ -0.05
Msh6-201ENSMUST00000005503 Rrbp1Q99PL5 1605 aaKnown RBP14.71□□□□□ -0.05
Msh6-201ENSMUST00000005503 Abcd1P48410 736 aa14.71□□□□□ -0.05
Msh6-201ENSMUST00000005503 L1td1Q587J6 782 aaKnown RBP14.71□□□□□ -0.05
Msh6-201ENSMUST00000005503 Vps54Q5SPW0 977 aa14.71□□□□□ -0.05
Msh6-201ENSMUST00000005503 Ggt6Q6PDE7 497 aa14.71□□□□□ -0.05
Msh6-201ENSMUST00000005503 Ppp1r10Q80W00 888 aaKnown RBP14.71□□□□□ -0.05
Msh6-201ENSMUST00000005503 Lrrfip2Q91WK0 415 aa14.71□□□□□ -0.05
Msh6-201ENSMUST00000005503 Kdm5aQ3UXZ9 1690 aa14.71□□□□□ -0.06
Msh6-201ENSMUST00000005503 Dync1i1O88485 628 aa14.71□□□□□ -0.06
Msh6-201ENSMUST00000005503 GnpatP98192 678 aa14.71□□□□□ -0.06
Msh6-201ENSMUST00000005503 Ccdc82Q6PG04 518 aa14.71□□□□□ -0.06
Msh6-201ENSMUST00000005503 EngaseQ8BX80 734 aa14.71□□□□□ -0.06
Msh6-201ENSMUST00000005503 Ptcd1Q8C2E4 695 aaKnown RBP14.71□□□□□ -0.06
Msh6-201ENSMUST00000005503 Nrbp1Q99J45 535 aa14.71□□□□□ -0.06
Msh6-201ENSMUST00000005503 Ets1P27577 440 aa14.7□□□□□ -0.06
Msh6-201ENSMUST00000005503 Kri1Q8VDQ9 704 aaKnown RBP14.7□□□□□ -0.06
Msh6-201ENSMUST00000005503 Znf704Q9ERQ3 566 aa14.7□□□□□ -0.06
Msh6-201ENSMUST00000005503 Abca16E9PWJ7 1678 aa14.7□□□□□ -0.06
Msh6-201ENSMUST00000005503 Tlr7P58681 1050 aa14.7□□□□□ -0.06
Msh6-201ENSMUST00000005503 Nxf2Q4ZGD8 691 aa14.7□□□□□ -0.06
Msh6-201ENSMUST00000005503 Fam114a1Q9D281 569 aa14.7□□□□□ -0.06
Msh6-201ENSMUST00000005503 MarsQ68FL6 902 aaKnown RBP14.7□□□□□ -0.06
Msh6-201ENSMUST00000005503 Gm21985Q6P6P5 1106 aa14.7□□□□□ -0.06
Msh6-201ENSMUST00000005503 Gnl3lQ6PGG6 577 aaKnown RBP14.7□□□□□ -0.06
Msh6-201ENSMUST00000005503 Flad1Q8R123 492 aa14.7□□□□□ -0.06
Msh6-201ENSMUST00000005503 Gm45140A0A0N4SUM8 220 aa14.69□□□□□ -0.06
Msh6-201ENSMUST00000005503 Ces1hD3Z298 562 aa14.69□□□□□ -0.06
Msh6-201ENSMUST00000005503 Krt84Q99M73 603 aa14.69□□□□□ -0.06
Msh6-201ENSMUST00000005503 Abcc1O35379 1528 aa14.69□□□□□ -0.06
Msh6-201ENSMUST00000005503 Dnm1P39053 867 aa14.69□□□□□ -0.06
Msh6-201ENSMUST00000005503 Cdkl5Q3UTQ8 938 aa14.69□□□□□ -0.06
Msh6-201ENSMUST00000005503 Leo1Q5XJE5 667 aa14.69□□□□□ -0.06
Msh6-201ENSMUST00000005503 Rnf187Q8BFX1 236 aa14.69□□□□□ -0.06
Msh6-201ENSMUST00000005503 Slc39a6Q8C145 765 aa14.69□□□□□ -0.06
Msh6-201ENSMUST00000005503 Plcd3Q8K2J0 785 aa14.69□□□□□ -0.06
Msh6-201ENSMUST00000005503 Ptch1Q61115 1434 aa14.69□□□□□ -0.06
Msh6-201ENSMUST00000005503 Usp54Q8BL06 1588 aaKnown RBP14.69□□□□□ -0.06
Msh6-201ENSMUST00000005503 Unc5clQ6R653 518 aa14.69□□□□□ -0.06
Msh6-201ENSMUST00000005503 Ccdc39Q9D5Y1 937 aa14.69□□□□□ -0.06
Msh6-201ENSMUST00000005503 Zeb2Q9R0G7 1215 aa14.69□□□□□ -0.06
Msh6-201ENSMUST00000005503 Map9Q3TRR0 646 aa14.69□□□□□ -0.06
Msh6-201ENSMUST00000005503 Me3Q8BMF3 604 aa14.69□□□□□ -0.06
Msh6-201ENSMUST00000005503 CenphQ9QYM8 241 aa14.69□□□□□ -0.06
Msh6-201ENSMUST00000005503 Znf518aB2RRF6 1478 aaKnown RBP14.68□□□□□ -0.06
Msh6-201ENSMUST00000005503 Ankrd40Q5SUE8 363 aa14.68□□□□□ -0.06
Msh6-201ENSMUST00000005503 Atf3Q60765 181 aa14.68□□□□□ -0.06
Msh6-201ENSMUST00000005503 Vps16Q920Q4 839 aa14.68□□□□□ -0.06
Msh6-201ENSMUST00000005503 Nckap5lQ6GQX2 1323 aa14.68□□□□□ -0.06
Msh6-201ENSMUST00000005503 Dhx8A2A4P0 1244 aaKnown RBP14.68□□□□□ -0.06
Msh6-201ENSMUST00000005503 Odf2A3KGV1 830 aaKnown RBP14.68□□□□□ -0.06
Msh6-201ENSMUST00000005503 Hspa4Q61316 841 aa14.68□□□□□ -0.06
Msh6-201ENSMUST00000005503 Zrsr2Q62377 462 aaKnown RBP14.68□□□□□ -0.06
Msh6-201ENSMUST00000005503 Rps6ka5Q8C050 863 aa14.68□□□□□ -0.06
Msh6-201ENSMUST00000005503 Card6E9PWH2 1175 aa14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 Hap1O35668 628 aa14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 FanccP50652 591 aa14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 VeztQ3ZK22 780 aa14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 CtcfQ61164 736 aaKnown RBP14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 Tmem87bQ8BKU8 555 aa14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 Ccdc12Q8R344 166 aaKnown RBP14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 Plcd1Q8R3B1 756 aa14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 Kcnh5Q920E3 988 aa14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 Trim11Q99PQ2 467 aa14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 Gli2Q0VGT2 1544 aa14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 Tmem94Q7TSH8 1360 aa14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 Stk36Q69ZM6 1316 aa14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 Rps6kb1Q8BSK8 525 aa14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 Tango6Q8C3S2 1079 aa14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 DymQ8CHY3 669 aa14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 Frat2Q8K025 231 aa14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 Dhx30Q99PU8 1217 aaKnown RBP14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 Zscan20B2KFW1 1030 aa14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 Gm42641I6L9G2 585 aa14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 Gnat3Q3V3I2 354 aa14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 AtripQ8BMG1 785 aa14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 Baiap2l1Q9DBJ3 514 aa14.67□□□□□ -0.06
Msh6-201ENSMUST00000005503 Jakmip3Q5DTN8 844 aa14.66□□□□□ -0.06
Msh6-201ENSMUST00000005503 Sirt1Q923E4 737 aa14.66□□□□□ -0.06
Msh6-201ENSMUST00000005503 Dnajc10Q9DC23 793 aa14.66□□□□□ -0.06
Msh6-201ENSMUST00000005503 GmnnO88513 206 aa14.66□□□□□ -0.06
Msh6-201ENSMUST00000005503 Myd88P22366 296 aa14.66□□□□□ -0.06
Msh6-201ENSMUST00000005503 Timm10P62073 90 aa14.66□□□□□ -0.06
Msh6-201ENSMUST00000005503 Elf2Q9JHC9 593 aa14.66□□□□□ -0.06
Msh6-201ENSMUST00000005503 Sdc2P43407 202 aa14.66□□□□□ -0.06
Msh6-201ENSMUST00000005503 Phldb2Q8K1N2 1249 aa14.66□□□□□ -0.06
Msh6-201ENSMUST00000005503 Pkp1P97350 728 aaKnown RBP14.66□□□□□ -0.06
Msh6-201ENSMUST00000005503 Sptlc2P97363 560 aaKnown RBP14.66□□□□□ -0.06
Msh6-201ENSMUST00000005503 Pde1cQ64338 706 aa14.66□□□□□ -0.06
Msh6-201ENSMUST00000005503 Cdca8Q8BHX3 289 aa14.66□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms