RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Mcm3P25206 812 aaKnown RBP22.34■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Hvcn1Q3U2S8 269 aa22.34■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Leo1Q5XJE5 667 aa22.34■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Tsr2Q8C8T8 191 aa22.34■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Cfap73J3QPZ5 306 aa22.33■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Morc2aQ69ZX6 1030 aa22.33■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 TkfcQ8VC30 578 aa22.33■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Mst1rQ62190 1378 aa22.33■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Wnk3Q80XP9 1757 aa22.33■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Tns2Q8CGB6 1400 aa22.33■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 MecomP14404 1042 aa22.33■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 ThemisQ8BGW0 636 aa22.33■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Rtn4Q99P72 1162 aaKnown RBP22.33■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 PdcQ9QW08 244 aa22.33■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 RubcnlQ3TD16 648 aa22.32■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Rnf20Q5DTM8 973 aa22.32■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Rps6kb1Q8BSK8 525 aa22.32■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Tceanc2Q8R2M0 207 aa22.32■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Phkg2Q9DB30 406 aa22.32■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Mx2Q9WVP9 655 aa22.32■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Zbtb22Q9Z0G7 638 aa22.32■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Tbc1d4Q8BYJ6 1307 aa22.32■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 NcapgE9PWG6 1004 aa22.32■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 AceP09470 1312 aa22.31■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 InsrrQ9WTL4 1300 aa22.31■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Klhl34A2AI76 644 aa22.31■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Evi5lH3BKQ3 813 aa22.31■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 MyclP10166 368 aa22.31■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 FanccP50652 591 aa22.31■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Larp1Q6ZQ58 1072 aaKnown RBP22.31■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Bloc1s2Q9CWG9 143 aa22.31■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Atp8b3Q6UQ17 1335 aa22.31■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Ttll7A4Q9F0 912 aa22.31■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Esyt1Q3U7R1 1092 aaKnown RBP22.31■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Nap1l3Q794H2 544 aa22.31■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Chmp7Q8R1T1 451 aa22.31■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Utp3Q9JI13 469 aaKnown RBP22.31■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Ppp6r1Q7TSI3 856 aa22.3■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 OptnQ8K3K8 584 aa22.3■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 EzrP26040 586 aaKnown RBP22.3■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Ccdc162pQ0VG85 912 aa22.3■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 StrbpQ91WM1 672 aaKnown RBP22.3■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Add3Q9QYB5 706 aaKnown RBP22.3■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Hmg20bQ9Z104 317 aa22.3■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Adora1Q60612 326 aa22.28■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 TefQ9JLC6 301 aa22.28■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Ric1Q69ZJ7 1422 aa22.28■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Slit1Q80TR4 1531 aa22.28■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Cep57l1Q8VDS7 400 aa22.28■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Hspa2P17156 633 aa22.27■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 DbnlQ62418 436 aa22.27■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Prkab2Q6PAM0 271 aa22.27■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 MypnQ5DTJ9 1315 aa22.27■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Wdr33Q8K4P0 1330 aaKnown RBP22.27■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Usp25P57080 1055 aa22.27■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Cnnm1Q0GA42 951 aa22.27■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Cnnm3Q32NY4 713 aa22.27■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Snx13Q6PHS6 957 aa22.27■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 Tmem87bQ8BKU8 555 aa22.27■■□□□ 1.16
Shkbp1-201ENSMUST00000003857 CrklP47941 303 aa22.26■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 GpkowQ56A08 488 aa22.26■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 FocadA2AKG8 1798 aa22.26■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Ripor2Q80U16 1078 aa22.26■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Ndufa8Q9DCJ5 172 aa22.26■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 PhaxQ9JJT9 385 aaKnown RBP22.26■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Mmel1Q9JLI3 765 aa22.26■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Jarid2Q62315 1234 aa22.25■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Me3Q8BMF3 604 aa22.25■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Rbbp8nlA2ABX0 614 aa22.24■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Wdr78E9PYY5 807 aa22.24■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Ctdnep1Q3TP92 244 aa22.24■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Ncbp1Q3UYV9 790 aaKnown RBP22.24■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Tubb6Q922F4 447 aa22.24■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Kcna6Q61923 529 aa22.23■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Rps6ka5Q8C050 863 aa22.23■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Nek11Q8C0Q4 628 aa22.23■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Ttc27Q8CD92 847 aa22.23■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Farp2Q91VS8 1065 aa22.23■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Zkscan7E9PVW1 718 aa22.23■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Inpp5bQ8K337 993 aa22.23■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Plcd1Q8R3B1 756 aa22.23■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 PigbQ9JJQ0 542 aa22.23■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Fbxl16A2RT62 479 aa22.22■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 NmiO35309 314 aa22.22■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Slc39a6Q8C145 765 aa22.22■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Slain2Q8CI08 581 aa22.22■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Nrxn3Q6P9K9 1571 aa22.22■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Neurod6P48986 337 aa22.21■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 CgnP59242 1191 aa22.21■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Bach1P97302 739 aa22.21■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Oxsr1Q6P9R2 527 aa22.21■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Dixdc1Q80Y83 711 aa22.21■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Brpf3B2KF05 1204 aaKnown RBP22.21■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Stat1P42225 749 aa22.21■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Cfap157Q0VFX2 523 aa22.21■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Asic4Q7TNS7 539 aa22.21■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 ZwintQ9CQU5 252 aa22.21■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Zranb3Q6NZP1 1069 aa22.2■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Kank4Q6P9J5 1016 aa22.2■■□□□ 1.15
Shkbp1-201ENSMUST00000003857 Ppp1r10Q80W00 888 aaKnown RBP22.2■■□□□ 1.15
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms