RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Tiam1Q60610 1591 aa10.46□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Sh2d4bA6X942 431 aa10.46□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Tbc1d32Q3URV1 1296 aa10.46□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Hdhd2Q3UGR5 259 aa10.46□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Maip1Q8BHE8 291 aa10.46□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Calcoco1Q8CGU1 691 aa10.46□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Mlh3A0A1Y7VMP7 1443 aa10.46□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Camsap2Q8C1B1 1461 aa10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Neurog2P70447 263 aa10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Znf653Q6YND2 615 aa10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Myd88P22366 296 aa10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Soga3Q6NZL0 945 aa10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Rbm26Q6NZN0 1012 aaKnown RBP10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 GlmnQ8BZM1 596 aa10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Rassf4Q8CB96 322 aa10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Ano2Q8CFW1 1002 aa10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Rdm1Q9CQK3 281 aa10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Kank1E9Q238 1360 aa10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Usp25P57080 1055 aa10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 AcrbpQ3V140 540 aa10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Ppp4r3aQ6P2K6 820 aa10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Ppfibp1Q8C8U0 969 aaKnown RBP10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Fam76aQ922G2 307 aa10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Dync1i1O88485 628 aa10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Ppp1r21Q3TDD9 780 aa10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Tbc1d9Q3UYK3 1264 aa10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Arhgef6Q8K4I3 771 aa10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 CactinQ9CS00 772 aaKnown RBP10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Tacc2Q9JJG0 1149 aa10.45□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 EappQ5BU09 281 aa10.44□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Ccdc148Q6P5U8 527 aa10.44□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 SltmQ8CH25 1031 aaKnown RBP10.44□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Vps18Q8R307 973 aa10.44□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Rab3il1Q8VDV3 383 aa10.44□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Caprin2Q05A80 1031 aaKnown RBP10.44□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Lrrc43Q3V0L5 667 aa10.44□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Cwc25Q9DBF7 416 aa10.44□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Klf15Q9EPW2 415 aa10.44□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Tmod2Q9JKK7 351 aa10.44□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Gm10093D3YYI8 482 aa10.44□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Hdac1O09106 482 aaKnown RBP10.44□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Hdac9Q99N13 588 aa10.44□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Arap1Q4LDD4 1452 aa10.44□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 EprsQ8CGC7 1512 aaKnown RBP10.44□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 LifrP42703 1092 aa10.44□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Gnat2P50149 354 aa10.44□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Ccdc162pQ0VG85 912 aa10.44□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Cpa2Q504N0 417 aa10.44□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Svs3aF2Z472 265 aa10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Atp2a2O55143 1044 aaKnown RBP10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Top1Q04750 767 aaKnown RBP10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Aldh8a1Q8BH00 487 aa10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Apol7cQ8C6E1 369 aa10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Mkrn1Q9QXP6 481 aa10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Gbp2Q9Z0E6 589 aa10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Aimp1P31230 310 aaKnown RBP10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Usp5P56399 858 aaKnown RBP10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Tex35Q14BK3 207 aa10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 SlmapQ3URD3 845 aa10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 L1td1Q587J6 782 aaKnown RBP10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Klc3Q91W40 508 aa10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Gm10378F6XQQ1 160 aa10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Ccdc114Q3UX62 658 aa10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Tbc1d5Q80XQ2 815 aa10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 RalgapbQ8BQZ4 1484 aa10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Six6os1Q9CTN5 574 aa10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 ParvgQ9ERD8 331 aa10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 DmtnQ9WV69 405 aa10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Atf7ipQ7TT18 1306 aa10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Bicdl1A0JNT9 577 aa10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Rasa1E9PYG6 1038 aa10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Mnat1P51949 309 aa10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 SfswapQ3USH5 945 aaKnown RBP10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Spats2Q8K1N4 545 aaKnown RBP10.43□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Grin2bQ01097 1482 aa10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Fam186bD3Z420 943 aa10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Serpinc1P32261 465 aa10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 L3mbtl2P59178 703 aa10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 HellsQ60848 821 aa10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Pde1cQ64338 706 aa10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Gm21985Q6P6P5 1106 aa10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Fbln2P37889 1221 aa10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Dact3Q0PHV7 610 aa10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 DlatQ8BMF4 642 aa10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 CenppQ9CZ92 286 aa10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 WtapQ9ER69 396 aa10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Epb41l2O70318 988 aaKnown RBP10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Ppp1r10Q80W00 888 aaKnown RBP10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Cep19Q9CQA8 163 aa10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Efhd1Q9D4J1 240 aa10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Paip2Q9D6V8 124 aa10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Palm3A2TJV2 734 aa10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Gimap8Q75N62 688 aa10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Eif2aQ8BJW6 581 aaKnown RBP10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Fam204aQ8C6C7 236 aa10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Gbp7Q91Z40 638 aa10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Filip1Q9CS72 1211 aa10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Kcnn1Q9EQR3 537 aa10.42□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 Rsph10bE9PYQ0 876 aa10.41□□□□□ -0.74
Ccdc47-201ENSMUST00000002043 NmiO35309 314 aa10.41□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms