RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 PSME2Q9UL46 239 aa7.43□□□□□ -1.22
SCARB2-220ENST00000640076 CLEC4AQ9UMR7 237 aa7.43□□□□□ -1.22
SCARB2-220ENST00000640076 ERVK-11Q9UQG0 969 aa7.43□□□□□ -1.22
SCARB2-220ENST00000640076 CCDC187A0A096LP49 1063 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 A0A0U1RQK1 487 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 ZNF320A2RRD8 509 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 CDC14CA4D256 554 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 PMS2P1A4D2B8 440 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 GYG2O15488 501 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 MPIG6BO95866 241 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 NTRK1P04629 796 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 HBQ1P09105 142 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 TMIGD3P0DMS9 266 aaPredicted RBP7.42□□□□□ -1.22
SCARB2-220ENST00000640076 FBLP22087 321 aaKnown RBP7.42□□□□□ -1.22
SCARB2-220ENST00000640076 MST1P26927 711 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 PTPN6P29350 595 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 RORAP35398 523 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 FRKP42685 505 aaPredicted RBP7.42□□□□□ -1.22
SCARB2-220ENST00000640076 XCR1P46094 333 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 NOVA1P51513 510 aaKnown RBP7.42□□□□□ -1.22
SCARB2-220ENST00000640076 RUNX1T1Q06455 604 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 EIF3IQ13347 325 aaKnown RBP7.42□□□□□ -1.22
SCARB2-220ENST00000640076 NFYCQ13952 458 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 LASP1Q14847 261 aaKnown RBP7.42□□□□□ -1.22
SCARB2-220ENST00000640076 ARHGAP40Q5TG30 622 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 ANKRD34AQ69YU3 496 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 CDPF1Q6NVV7 123 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 C8orf82Q6P1X6 216 aaPredicted RBP7.42□□□□□ -1.22
SCARB2-220ENST00000640076 DHDDSQ86SQ9 333 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 KLHL29Q96CT2 875 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 LRRC58Q96CX6 371 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 ZNF681Q96N22 645 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 ATP6V0BQ99437 205 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 IL1RL2Q9HB29 575 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 SLC22A11Q9NSA0 550 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 SLC6A13Q9NSD5 602 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 GID8Q9NWU2 228 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 BTNL2Q9UIR0 455 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 NEUROG3Q9Y4Z2 214 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 A0A096LPI6 279 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 A0A1W2PRB8 838 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 A0A1W2PS29 197 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 MYO1GB0I1T2 1018 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 H0YAE9 185 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 RFXANKO14593 260 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 ERN1O75460 977 aaKnown RBP7.42□□□□□ -1.22
SCARB2-220ENST00000640076 C6orf47O95873 294 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 ZNF28P17035 718 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 ZNF3P17036 446 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 HOXB9P17482 250 aaPredicted RBP7.42□□□□□ -1.22
SCARB2-220ENST00000640076 CDKN2CP42773 168 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 MAP2K3P46734 347 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 HBA1P69905 142 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 FOLH1Q04609 750 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 ABHD18Q0P651 414 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 CAPRIN1Q14444 709 aaKnown RBP7.42□□□□□ -1.22
SCARB2-220ENST00000640076 CEBPEQ15744 281 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 MST1LQ2TV78 715 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 ZNF750Q32MQ0 723 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 NKAIN1Q4KMZ8 207 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 LRIF1Q5T3J3 769 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 DCAF12Q5T6F0 453 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 ZNF385CQ66K41 422 aaPredicted RBP7.42□□□□□ -1.22
SCARB2-220ENST00000640076 C16orf89Q6UX73 402 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 ISLR2Q6UXK2 745 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 CEACAM20Q6UY09 585 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 MED25Q71SY5 747 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 MSRB3Q8IXL7 192 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 ZNF595Q8IYB9 648 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 DEFB107AQ8IZN7 70 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 PGAM4Q8N0Y7 254 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 MFSD4AQ8N468 514 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 KIF2BQ8N4N8 673 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 SLC15A4Q8N697 577 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 OR4K14Q8NGD5 310 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 TANKQ92844 425 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 ZBED6CLQ96FA7 236 aaPredicted RBP7.42□□□□□ -1.22
SCARB2-220ENST00000640076 AMDHD1Q96NU7 426 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 PANX1Q96RD7 426 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 TXN2Q99757 166 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 DDA1Q9BW61 102 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 NELFAQ9H3P2 528 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 OPA3Q9H6K4 179 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 SNTG1Q9NSN8 517 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 ACSS1Q9NUB1 689 aaPredicted RBP7.42□□□□□ -1.22
SCARB2-220ENST00000640076 NDE1Q9NXR1 346 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 SLC25A37Q9NYZ2 338 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 MRPL15Q9P015 296 aaKnown RBP7.42□□□□□ -1.22
SCARB2-220ENST00000640076 VAPAQ9P0L0 249 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 TRPC4Q9UBN4 977 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 FBLN5Q9UBX5 448 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 PISDQ9UG56 409 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 CROTQ9UKG9 612 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 ENTPD4Q9Y227 616 aa7.42□□□□□ -1.22
SCARB2-220ENST00000640076 MRPS33Q9Y291 106 aaKnown RBP7.42□□□□□ -1.22
SCARB2-220ENST00000640076 DCHS1Q96JQ0 3298 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 PTPRBP23467 1997 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 CCDC88CQ9P219 2028 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 SPTBN4Q9H254 2564 aa7.41□□□□□ -1.22
SCARB2-220ENST00000640076 TRBV5-3A0A0A0MS03 114 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms