RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 GANQ9H2C0 597 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 UBTD1Q9HAC8 227 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 MSL2Q9HCI7 577 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 TMEM9BQ9NQ34 198 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 PNO1Q9NRX1 252 aaKnown RBP6.66□□□□□ -1.34
NECAP1-220ENST00000639841 LHX3Q9UBR4 397 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 UBQLN1Q9UMX0 589 aaKnown RBP6.66□□□□□ -1.34
NECAP1-220ENST00000639841 ERVK-19Q9WJR5 959 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 CSDC2Q9Y534 153 aaKnown RBP6.66□□□□□ -1.34
NECAP1-220ENST00000639841 MAP1BP46821 2468 aaKnown RBP6.66□□□□□ -1.34
NECAP1-220ENST00000639841 GPR179Q6PRD1 2367 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 USP24Q9UPU5 2620 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 PDLIM1O00151 329 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 CCL24O00175 119 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 LAD1O00515 517 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 JAK2O60674 1132 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 PFKFB2O60825 505 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 NOVA1P51513 510 aaKnown RBP6.66□□□□□ -1.34
NECAP1-220ENST00000639841 GEMP55040 296 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 TMPRSS3P57727 454 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 RGS8P57771 180 aaPredicted RBP6.66□□□□□ -1.34
NECAP1-220ENST00000639841 FOXM1Q08050 763 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 ZNF415Q09FC8 603 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 EXOSC7Q15024 291 aaKnown RBP6.66□□□□□ -1.34
NECAP1-220ENST00000639841 TEAD2Q15562 447 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 SYPL1Q16563 259 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 OR2A2Q6IF42 318 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 TMEM65Q6PI78 240 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 KCNIP4Q6PIL6 250 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 CD163Q86VB7 1156 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 DTX1Q86Y01 620 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 C12orf56Q8IXR9 622 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 FAM58AQ8N1B3 248 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 ALLCQ8N6M5 410 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 PCDH20Q8N6Y1 951 aaKnown RBP6.66□□□□□ -1.34
NECAP1-220ENST00000639841 PQLC3Q8N755 202 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 ACVR1CQ8NER5 493 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 OR4C5Q8NGB2 326 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 SPPL2BQ8TCT7 592 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 SCARB1Q8WTV0 552 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 LHX4Q969G2 390 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 FUBP1Q96AE4 644 aaKnown RBP6.66□□□□□ -1.34
NECAP1-220ENST00000639841 FUNDC2Q9BWH2 189 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 ARRDC1-AS1Q9H2J1 176 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 MCCC2Q9HCC0 563 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 LYRM4Q9HD34 91 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 SLC52A3Q9NQ40 469 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 MAN2C1Q9NTJ4 1040 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 EURLQ9NYK6 297 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 PTTG3PQ9NZH4 202 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 ZNF490Q9ULM2 529 aaPredicted RBP6.66□□□□□ -1.34
NECAP1-220ENST00000639841 SPAG17Q6Q759 2223 aa6.66□□□□□ -1.34
NECAP1-220ENST00000639841 BCLAF3A2AJT9 711 aaKnown RBP6.65□□□□□ -1.34
NECAP1-220ENST00000639841 NCR1O76036 304 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 HPRP00739 348 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 FCGR1AP12314 374 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 IRF2P14316 349 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 CCNB1P14635 433 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 PROZP22891 400 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 RRM2P31350 389 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 CLDN20P56880 219 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 YWHAGP61981 247 aaKnown RBP eCLIP6.65□□□□□ -1.34
NECAP1-220ENST00000639841 FOXL1Q12952 345 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 LPAL2Q16609 132 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 UGT3A2Q3SY77 523 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 C6orf226Q5I0X4 101 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 C8orf74Q6P047 294 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 ZNF367Q7RTV3 350 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 WDR53Q7Z5U6 358 aaPredicted RBP6.65□□□□□ -1.34
NECAP1-220ENST00000639841 PARGQ86W56 976 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 SLC5A8Q8N695 610 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 HORMAD2Q8N7B1 307 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 LRRC20Q8TCA0 184 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 THOC1Q96FV9 657 aaKnown RBP6.65□□□□□ -1.34
NECAP1-220ENST00000639841 ZNF419Q96HQ0 510 aaPredicted RBP6.65□□□□□ -1.34
NECAP1-220ENST00000639841 ELMO2Q96JJ3 720 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 NUSAP1Q9BXS6 441 aaKnown RBP6.65□□□□□ -1.34
NECAP1-220ENST00000639841 IL22Q9GZX6 179 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 UCK1Q9HA47 277 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 IL1RL2Q9HB29 575 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 SMPD4Q9NXE4 827 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 ENPP5Q9UJA9 477 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 EMCNQ9ULC0 261 aa6.65□□□□□ -1.34
NECAP1-220ENST00000639841 LRRC3CA6NJW4 275 aa6.64□□□□□ -1.35
NECAP1-220ENST00000639841 BTN3A3O00478 584 aa6.64□□□□□ -1.35
NECAP1-220ENST00000639841 LSM1O15116 133 aaKnown RBP6.64□□□□□ -1.35
NECAP1-220ENST00000639841 SPINT2O43291 252 aa6.64□□□□□ -1.35
NECAP1-220ENST00000639841 KDELR3O43731 214 aa6.64□□□□□ -1.35
NECAP1-220ENST00000639841 SNX3O60493 162 aa6.64□□□□□ -1.35
NECAP1-220ENST00000639841 SEC24AO95486 1093 aa6.64□□□□□ -1.35
NECAP1-220ENST00000639841 PLEKP08567 350 aaPredicted RBP6.64□□□□□ -1.35
NECAP1-220ENST00000639841 POU2F1P14859 743 aa6.64□□□□□ -1.35
NECAP1-220ENST00000639841 CSTF2P33240 577 aaKnown RBP eCLIP6.64□□□□□ -1.35
NECAP1-220ENST00000639841 GMPRP36959 345 aa6.64□□□□□ -1.35
NECAP1-220ENST00000639841 AVPR1AP37288 418 aa6.64□□□□□ -1.35
NECAP1-220ENST00000639841 BRCC3P46736 316 aa6.64□□□□□ -1.35
NECAP1-220ENST00000639841 NDST1P52848 882 aa6.64□□□□□ -1.35
NECAP1-220ENST00000639841 ARPP19P56211 112 aa6.64□□□□□ -1.35
NECAP1-220ENST00000639841 NME3Q13232 169 aa6.64□□□□□ -1.35
NECAP1-220ENST00000639841 RUNX3Q13761 415 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms