RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 STAT5AP42229 794 aa7.97□□□□□ -1.13
CACNA1A-254ENST00000637952 ZNF41P51814 821 aaPredicted RBP7.97□□□□□ -1.13
CACNA1A-254ENST00000637952 RPS3AP61247 264 aaKnown RBP7.97□□□□□ -1.13
CACNA1A-254ENST00000637952 RNF4P78317 190 aa7.97□□□□□ -1.13
CACNA1A-254ENST00000637952 AIMP2Q13155 320 aaKnown RBP7.97□□□□□ -1.13
CACNA1A-254ENST00000637952 MEP1AQ16819 746 aa7.97□□□□□ -1.13
CACNA1A-254ENST00000637952 KIF26BQ2KJY2 2108 aa7.97□□□□□ -1.13
CACNA1A-254ENST00000637952 RNF165Q6ZSG1 346 aa7.97□□□□□ -1.13
CACNA1A-254ENST00000637952 GALNT4Q8N4A0 578 aa7.97□□□□□ -1.13
CACNA1A-254ENST00000637952 ANKFN1Q8N957 763 aa7.97□□□□□ -1.13
CACNA1A-254ENST00000637952 GRHL3Q8TE85 626 aa7.97□□□□□ -1.13
CACNA1A-254ENST00000637952 THAP4Q8WY91 577 aa7.97□□□□□ -1.13
CACNA1A-254ENST00000637952 LRFN5Q96NI6 719 aa7.97□□□□□ -1.13
CACNA1A-254ENST00000637952 BDH2Q9BUT1 245 aa7.97□□□□□ -1.13
CACNA1A-254ENST00000637952 HOXD1Q9GZZ0 328 aa7.97□□□□□ -1.13
CACNA1A-254ENST00000637952 IFT52Q9Y366 437 aa7.97□□□□□ -1.13
CACNA1A-254ENST00000637952 AP4S1Q9Y587 144 aa7.97□□□□□ -1.13
CACNA1A-254ENST00000637952 PCDHGA7Q9Y5G6 932 aa7.97□□□□□ -1.13
CACNA1A-254ENST00000637952 KLK4Q9Y5K2 254 aa7.97□□□□□ -1.13
CACNA1A-254ENST00000637952 NPFFR2Q9Y5X5 522 aa7.97□□□□□ -1.13
CACNA1A-254ENST00000637952 SAGE2PA6NJ88 616 aa7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 PRKD3O94806 890 aa7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 CST1P01037 141 aa7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 SMIM10L1P0DMW3 83 aa7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 KDELR2P33947 212 aa7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 GNALP38405 381 aa7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 GPR143P51810 404 aa7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 EFR3AQ14156 821 aa7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 CORO6Q6QEF8 472 aa7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 ZNF704Q6ZNC4 412 aaPredicted RBP7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 C16orf47Q6ZP98 133 aaPredicted RBP7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 GALNT16Q8N428 558 aa7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 OR11G2Q8NGC1 345 aa7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 BRIX1Q8TDN6 353 aaKnown RBP7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 ZFP90Q8TF47 636 aa7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 ZCCHC14Q8WYQ9 949 aaKnown RBP7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 ANKRD9Q96BM1 317 aaPredicted RBP7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 OMA1Q96E52 524 aa7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 SMIM10Q96HG1 83 aa7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 NXF5Q9H1B4 397 aaKnown RBP7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 PIGUQ9H490 435 aa7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 SERINC1Q9NRX5 453 aa7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 LRFN1Q9P244 771 aa7.96□□□□□ -1.13
CACNA1A-254ENST00000637952 FAM220BPB1ANY3 271 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 ACOT7O00154 380 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 PCDH17O14917 1159 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 ITGA10O75578 1167 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 UGT2B17O75795 530 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 PGM3O95394 542 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 S100A1P23297 94 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 CXCR1P25024 350 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 GPR85P60893 370 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 GAB1Q13480 694 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 DUSP5Q16690 384 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 CYBRD1Q53TN4 286 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 OLIG3Q7RTU3 272 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 MRGPREQ86SM8 312 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 STK32CQ86UX6 486 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 DPP10Q8N608 796 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 FBXO27Q8NI29 283 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 APOBEC4Q8WW27 367 aaKnown RBP7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 PLEKHA8Q96JA3 519 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 PLA2G3Q9NZ20 509 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 NDUFA13Q9P0J0 144 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 POMPQ9Y244 141 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 DTX4Q9Y2E6 619 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 YARS2Q9Y2Z4 477 aaKnown RBP7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 SAMHD1Q9Y3Z3 626 aaKnown RBP7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 CEP192Q8TEP8 1941 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 A0A0G2JPF8 293 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 C2orf72A6NCS6 295 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 SAC3D1A6NKF1 404 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 HNRNPCL2B2RXH8 293 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 HNRNPCL3B7ZW38 293 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 ARPC2O15144 300 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 OR10H3O60404 316 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 PLOD3O60568 738 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 HNRNPCL4P0DMR1 293 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 GP1BBP13224 206 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 OR1E2P47887 323 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 SMIM11AP58511 58 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 CHRNEQ04844 493 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 MAP4K2Q12851 820 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 TLR1Q15399 786 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 COX20Q5RI15 118 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 ATP1A1-AS1Q5TC04 95 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 RAET1LQ5VY80 246 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 SLC22A10Q63ZE4 541 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 ZCCHC12Q6PEW1 402 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 CLVS1Q8IUQ0 354 aaPredicted RBP7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 EID3Q8N140 333 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 NEURL3Q96EH8 262 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 SEMA6AQ9H2E6 1030 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 ZNF71Q9NQZ8 489 aaPredicted RBP7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 UBQLN4Q9NRR5 601 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 CMTM6Q9NX76 183 aa7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 RPH3AQ9Y2J0 694 aaPredicted RBP7.96□□□□□ -1.14
CACNA1A-254ENST00000637952 ELOA3DA6NLF2 546 aaPredicted RBP7.95□□□□□ -1.14
CACNA1A-254ENST00000637952 NME4O00746 187 aa7.95□□□□□ -1.14
CACNA1A-254ENST00000637952 ENTPD5O75356 428 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms