RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 ZNF26P17031 533 aaPredicted RBP10.86□□□□□ -0.67
CLN6-223ENST00000637823 DNAJA1P31689 397 aaKnown RBP10.86□□□□□ -0.67
CLN6-223ENST00000637823 KRT20P35900 424 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 DCTP40126 519 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 RFX3P48380 749 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 ARHGDIAP52565 204 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 PNLIPRP2P54317 469 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 NRG3P56975 720 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 GK3PQ14409 553 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 RNF220Q5VTB9 566 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 PLAG1Q6DJT9 500 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 PPP4R4Q6NUP7 873 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 ZNF836Q6ZNA1 936 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 PPP1R32Q7Z5V6 425 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 HMGN2P46Q86SG4 172 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 MARCH9Q86YJ5 346 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 HIPK1Q86Z02 1210 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 CMIPQ8IY22 773 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 CLIP4Q8N3C7 705 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 OR11G2Q8NGC1 345 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 ELP5Q8TE02 316 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 NR4A3Q92570 626 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 DIO2Q92813 273 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 EPYCQ99645 322 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 PIP5K1AQ99755 562 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 NRSN2Q9GZP1 204 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 REEP1Q9H902 201 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 UBQLN4Q9NRR5 601 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 OAZ3Q9UMX2 235 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 CHST2Q9Y4C5 530 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 LRRC42Q9Y546 428 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 PCDHGA6Q9Y5G7 932 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 SPEGQ15772 3267 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 CEP250Q9BV73 2442 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 AHCTF1Q8WYP5 2266 aa10.86□□□□□ -0.67
CLN6-223ENST00000637823 HEATR5AQ86XA9 2040 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 DMXL1Q9Y485 3027 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 NPIPA5A0A0B4J1W7 369 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 LOC101059948A0A1B0GTJ6 334 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 NPIPA7E9PJI5 369 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 PRKNO60260 465 aaPredicted RBP10.85□□□□□ -0.67
CLN6-223ENST00000637823 TSPAN2O60636 221 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 E2F6O75461 281 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 DXOO77932 396 aaKnown RBP10.85□□□□□ -0.67
CLN6-223ENST00000637823 RASAL1O95294 804 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 NPIPA8P0DM63 369 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 ICAM2P13598 275 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 NAGAP17050 411 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 FPR1P21462 350 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 TBXA2RP21731 343 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 IL12BP29460 328 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 RRM2P31350 389 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 OTX2P32243 289 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 HMGA2P52926 109 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 SMIM11AP58511 58 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 RPS18P62269 152 aaKnown RBP10.85□□□□□ -0.67
CLN6-223ENST00000637823 RSPO4Q2I0M5 234 aaPredicted RBP10.85□□□□□ -0.67
CLN6-223ENST00000637823 BTBD16Q32M84 506 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 KLHL26Q53HC5 615 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 PDZK1Q5T2W1 519 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 TCTN3Q6NUS6 607 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 SHQ1Q6PI26 577 aaKnown RBP10.85□□□□□ -0.67
CLN6-223ENST00000637823 IZUMO2Q6UXV1 221 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 ZNF605Q86T29 641 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 STK32CQ86UX6 486 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 COMTD1Q86VU5 262 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 DTX1Q86Y01 620 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 RBM45Q8IUH3 476 aaKnown RBP10.85□□□□□ -0.67
CLN6-223ENST00000637823 ZDHHC13Q8IUH4 622 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 GRAMD2AQ8IUY3 354 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 LACC1Q8IV20 430 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 TAGAPQ8N103 731 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 GALNT4Q8N4A0 578 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 SLC15A4Q8N697 577 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 ZNF527Q8NB42 609 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 OR4D11Q8NGI4 311 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 OR6T1Q8NGN1 323 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 VANGL1Q8TAA9 524 aaPredicted RBP10.85□□□□□ -0.67
CLN6-223ENST00000637823 NKD1Q969G9 470 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 SLC35B4Q969S0 331 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 EFHD2Q96C19 240 aaPredicted RBP10.85□□□□□ -0.67
CLN6-223ENST00000637823 SDCCAG3Q96C92 435 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 SLC29A1Q99808 456 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 OSBPL10Q9BXB5 764 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 DEFB126Q9BYW3 111 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 MMP25Q9NPA2 562 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 ASCL3Q9NQ33 180 aa10.85□□□□□ -0.67
CLN6-223ENST00000637823 RYDENQ9NUL5 291 aaKnown RBP10.85□□□□□ -0.67
CLN6-223ENST00000637823 DOCK10Q96BY6 2186 aa10.84□□□□□ -0.67
CLN6-223ENST00000637823 NSG1A0A0A6YYJ2 146 aa10.84□□□□□ -0.67
CLN6-223ENST00000637823 CENPVL1A0A0U1RR11 272 aa10.84□□□□□ -0.67
CLN6-223ENST00000637823 CDC14CA4D256 554 aa10.84□□□□□ -0.67
CLN6-223ENST00000637823 CDHR4A6H8M9 788 aa10.84□□□□□ -0.67
CLN6-223ENST00000637823 TMEM200CA6NKL6 621 aa10.84□□□□□ -0.67
CLN6-223ENST00000637823 M0R3H8 397 aa10.84□□□□□ -0.67
CLN6-223ENST00000637823 PDLIM1O00151 329 aa10.84□□□□□ -0.67
CLN6-223ENST00000637823 TNFRSF11BO00300 401 aa10.84□□□□□ -0.67
CLN6-223ENST00000637823 SOCS2O14508 198 aa10.84□□□□□ -0.67
CLN6-223ENST00000637823 HS6ST1O60243 411 aa10.84□□□□□ -0.67
CLN6-223ENST00000637823 UTS2O95399 124 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms