RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 MYOTQ9UBF9 498 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 PCDHGB3Q9Y5G1 929 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 KCNE3Q9Y6H6 103 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 FRG2CA6NGY1 282 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 TMEM200CA6NKL6 621 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 K7ENP7 123 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 ARPC2O15144 300 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 ASNA1O43681 348 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 DNAJB5O75953 348 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 SOX11P35716 441 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 MAP3K8P41279 467 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 MAGEA8P43361 318 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 RFX3P48380 749 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 CCL11P51671 97 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 LIPEQ05469 1076 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 ZBED5Q49AG3 693 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 EXOSC6Q5RKV6 272 aaKnown RBP13.34□□□□□ -0.27
LINC00339-208ENST00000634934 B3GNTL1Q67FW5 361 aaPredicted RBP13.34□□□□□ -0.27
LINC00339-208ENST00000634934 INO80CQ6PI98 192 aaPredicted RBP13.34□□□□□ -0.27
LINC00339-208ENST00000634934 USP51Q70EK9 711 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 GPR155Q7Z3F1 870 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 C16orf62Q7Z3J2 963 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 RPS19BP1Q86WX3 136 aaKnown RBP13.34□□□□□ -0.27
LINC00339-208ENST00000634934 CROCCP3Q8IVE0 287 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 PRR22Q8IZ63 422 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 ZNF441Q8N8Z8 693 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 DRAXINQ8NBI3 349 aaPredicted RBP13.34□□□□□ -0.27
LINC00339-208ENST00000634934 OR4N2Q8NGD1 307 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 HOXB13Q92826 284 aaPredicted RBP13.34□□□□□ -0.27
LINC00339-208ENST00000634934 TP53INP1Q96A56 240 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 DOK1Q99704 481 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 ADI1Q9BV57 179 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 PRORYQ9H606 182 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 EXD2Q9NVH0 621 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 MAGEL2Q9UJ55 1249 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 PCDHGB5Q9Y5G0 923 aa13.34□□□□□ -0.27
LINC00339-208ENST00000634934 CACNA1BQ00975 2339 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 TMEM247A6NEH6 219 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 A8MVJ9 347 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 ACOX3O15254 700 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 MAN1A2O60476 641 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 TNFRSF21O75509 655 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 ITGA10O75578 1167 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 OR2J2O76002 312 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 SOX30O94993 753 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 AGR2O95994 175 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 TRHRP34981 398 aaPredicted RBP13.33□□□□□ -0.28
LINC00339-208ENST00000634934 GSK3BP49841 420 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 NRG3P56975 720 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 NUP107P57740 925 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 POU6F2P78424 691 aaPredicted RBP13.33□□□□□ -0.28
LINC00339-208ENST00000634934 MERTKQ12866 999 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 FIGNL1Q6PIW4 674 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 GALNT10Q86SR1 603 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 PATL1Q86TB9 770 aaKnown RBP13.33□□□□□ -0.28
LINC00339-208ENST00000634934 SERPINA11Q86U17 422 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 EPHX4Q8IUS5 362 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 TAGAPQ8N103 731 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 C17orf47Q8NEP4 570 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 PSMF1Q92530 271 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 MAL2Q969L2 176 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 NMD3Q96D46 503 aaKnown RBP13.33□□□□□ -0.28
LINC00339-208ENST00000634934 HSPBAP1Q96EW2 488 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 LMF1Q96S06 567 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 CIB1Q99828 191 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 BTBD2Q9BX70 525 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 ALG2Q9H553 416 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 THUMPD1Q9NXG2 353 aaKnown RBP13.33□□□□□ -0.28
LINC00339-208ENST00000634934 GIN1Q9NXP7 522 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 GPR83Q9NYM4 423 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 GMPR2Q9P2T1 348 aaKnown RBP13.33□□□□□ -0.28
LINC00339-208ENST00000634934 CBLCQ9ULV8 474 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 KCNMB2Q9Y691 235 aa13.33□□□□□ -0.28
LINC00339-208ENST00000634934 SMG1Q96Q15 3661 aaKnown RBP13.32□□□□□ -0.28
LINC00339-208ENST00000634934 SOCS2O14508 198 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 SLC28A2O43868 658 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 TIPRLO75663 272 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 HPRP00739 348 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 NR2F1P10589 423 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 KRT20P35900 424 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 ST13P50502 369 aaKnown RBP13.32□□□□□ -0.28
LINC00339-208ENST00000634934 MLF1P58340 268 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 ESRRGP62508 458 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 PLCXD2Q0VAA5 305 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 GK3PQ14409 553 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 NRF1Q16656 503 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 DECR1Q16698 335 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 CYP27C1Q4G0S4 372 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 GPAT3Q53EU6 434 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 CCNJQ5T5M9 372 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 H3F3CQ6NXT2 135 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 AMIGO2Q86SJ2 522 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 CALHM3Q86XJ0 350 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 OR2T12Q8NG77 320 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 SLC22A8Q8TCC7 542 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 TMBIM1Q969X1 311 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 ZNF354BQ96LW1 612 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 ZNF583Q96ND8 569 aa13.32□□□□□ -0.28
LINC00339-208ENST00000634934 KCTD14Q9BQ13 255 aaPredicted RBP13.32□□□□□ -0.28
LINC00339-208ENST00000634934 P2RX2Q9UBL9 471 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms