RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 GRAMD1BQ3KR37 738 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 LINC00303Q3SY05 128 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 SPATS1Q496A3 300 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 SPINK14Q6IE38 97 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 LRRC74BQ6ZQY2 392 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 RTL4Q6ZR62 310 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 NUP54Q7Z3B4 507 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 MDGA2Q7Z553 956 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 YTHDF3Q7Z739 585 aaKnown RBP7.82□□□□□ -1.16
SGMS1-211ENST00000626236 HMGN2P46Q86SG4 172 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 HPS6Q86YV9 775 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 ARHGAP24Q8N264 748 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 ZNF619Q8N2I2 560 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 FBXW8Q8N3Y1 598 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 METTL25Q8N6Q8 603 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 ZNF614Q8N883 585 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 TNIP2Q8NFZ5 429 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 BBS10Q8TAM1 723 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 TM9SF4Q92544 642 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 FIG4Q92562 907 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 HAS2Q92819 552 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 HGDQ93099 445 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 ABHD17AQ96GS6 310 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 SIGLEC12Q96PQ1 595 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 NODALQ96S42 347 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 CADM1Q9BY67 442 aaKnown RBP7.82□□□□□ -1.16
SGMS1-211ENST00000626236 RNF32Q9H0A6 362 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.82□□□□□ -1.161e-6■■■■□ 21.4
SGMS1-211ENST00000626236 QRSL1Q9H0R6 528 aaKnown RBP7.82□□□□□ -1.16
SGMS1-211ENST00000626236 SLC38A1Q9H2H9 487 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 POLE3Q9NRF9 147 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 KLRF1Q9NZS2 232 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 LRFN1Q9P244 771 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 CD300AQ9UGN4 299 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 EGFL7Q9UHF1 273 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 ZNF451Q9Y4E5 1061 aa7.82□□□□□ -1.16
SGMS1-211ENST00000626236 CHCHD2Q9Y6H1 151 aaPredicted RBP7.82□□□□□ -1.16
SGMS1-211ENST00000626236 DSPPQ9NZW4 1301 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 G3V3Y1 287 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 CXCR6O00574 342 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 SCDO00767 359 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 CDK2AP1O14519 115 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 GMNNO75496 209 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 SLC25A12O75746 678 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 UGT2B17O75795 530 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 NEURL1O76050 574 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 OXSR1O95747 527 aaPredicted RBP7.81□□□□□ -1.16
SGMS1-211ENST00000626236 PDGFAP04085 211 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 P04436 131 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 GUSBP08236 651 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 CCL3P10147 92 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 HSD17B1P14061 328 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 HPGDP15428 266 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 NCK1P16333 377 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 GGT1P19440 569 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 ME2P23368 584 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 HTR1EP28566 365 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 LCN1P31025 176 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 EVI2BP34910 448 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 ATP12AP54707 1039 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 RPP38P78345 283 aaKnown RBP7.81□□□□□ -1.16
SGMS1-211ENST00000626236 VEZF1Q14119 521 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 MAPK14Q16539 360 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 LRRC23Q53EV4 343 aaPredicted RBP7.81□□□□□ -1.16
SGMS1-211ENST00000626236 PDZK1Q5T2W1 519 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 INTS11Q5TA45 600 aaKnown RBP7.81□□□□□ -1.16
SGMS1-211ENST00000626236 PRAMEF20Q5VT98 475 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 PRAMEF8Q5VWM4 474 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 PRAMEF7Q5VXH5 474 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 BICRALQ6AI39 1079 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 IGFL2Q6UWQ7 119 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 ASRGL1Q7L266 308 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 ZNF227Q86WZ6 799 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 KRT73Q86Y46 540 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 ULK2Q8IYT8 1036 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 ZADH2Q8N4Q0 377 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 ZNF527Q8NB42 609 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 GOLM1Q8NBJ4 401 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 CATSPER1Q8NEC5 780 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 OR4C3Q8NH37 302 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 SPPL2AQ8TCT8 520 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 GRHL3Q8TE85 626 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 TTC9Q92623 222 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 CCDC124Q96CT7 223 aaKnown RBP7.81□□□□□ -1.16
SGMS1-211ENST00000626236 ZG16BQ96DA0 208 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 SGCZQ96LD1 299 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 C5orf34Q96MH7 638 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 ZNF607Q96SK3 696 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 TBL1XR1Q9BZK7 514 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 HOXD1Q9GZZ0 328 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 SAP130Q9H0E3 1048 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 PCDHAC1Q9H158 963 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 METTL7AQ9H8H3 244 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 TRIM45Q9H8W5 580 aaPredicted RBP7.81□□□□□ -1.16
SGMS1-211ENST00000626236 MTHFD2LQ9H903 347 aaPredicted RBP7.81□□□□□ -1.16
SGMS1-211ENST00000626236 CACYBPQ9HB71 228 aaKnown RBP7.81□□□□□ -1.16
SGMS1-211ENST00000626236 BCL2L10Q9HD36 194 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 SH2D2AQ9NP31 389 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 TIMMDC1Q9NPL8 285 aa7.81□□□□□ -1.16
SGMS1-211ENST00000626236 UBQLN4Q9NRR5 601 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms