RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	RPL23A	P62750	156 aa	Known RBP	13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	FUT2	Q10981	343 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	SCAP	Q12770	1279 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	CDCA2	Q69YH5	1023 aa	Predicted RBP	13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	FBXW12	Q6X9E4	464 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	DMBX1	Q8NFW5	382 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	SLC35B2	Q8TB61	432 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	SCRN2	Q96FV2	425 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	APMAP	Q9HDC9	416 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	POLE4	Q9NR33	117 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	RABL2A	Q9UBK7	228 aa	Predicted RBP	13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	RABL2B	Q9UNT1	228 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	S1PR4	O95977	384 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	RRAD	P55042	308 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	C6orf136	Q5SQH8	315 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	MPP7	Q5T2T1	576 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	AGAP7P	Q5VUJ5	663 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	AGAP6	Q5VW22	663 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	FAM83F	Q8NEG4	500 aa	Predicted RBP	13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	AGAP4	Q96P64	663 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	MS4A4E	Q96PG1	132 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	APOO	Q9BUR5	198 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	CD93	Q9NPY3	652 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	TES	Q9UGI8	421 aa	Known RBP	13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	TCHH	Q07283	1943 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672		K7ERQ8	282 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	ASRGL1	Q7L266	308 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	ACVR1C	Q8NER5	493 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	SLC7A7	Q9UM01	511 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	DCDC2B	A2VCK2	349 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	IL2RG	P31785	369 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	NPBWR1	P48145	328 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	GLO1	Q04760	184 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	PCLAF	Q15004	111 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	ZNF674	Q2M3X9	581 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	IER5L	Q5T953	404 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	ZNF529	Q6P280	563 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	PPP1R3B	Q86XI6	285 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	NPY6R	Q99463	290 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	RNF38	Q9H0F5	515 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	HRASLS	Q9HDD0	168 aa		13.12	□□□□□ -0.31
NRXN1-222	ENST00000625672	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672		B4DXG7	233 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	SC5D	O75845	299 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	SNAI1	O95863	264 aa	Predicted RBP	13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	ZNF705D	P0CH99	300 aa	Predicted RBP	13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	ZNF705B	P0CI00	300 aa	Predicted RBP	13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	DEFA4	P12838	97 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	RAB3B	P20337	219 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	CCL11	P51671	97 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	EFNA3	P52797	238 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	MANEAL	Q5VSG8	457 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	SRPK3	Q9UPE1	567 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	TRAV18	A0A075B6X5	111 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	TRAPPC13	A5PLN9	417 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	RDH16	O75452	317 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	DCST2	Q5T1A1	773 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	UHRF1	Q96T88	793 aa	Predicted RBP	13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	DMAC2	Q9NW81	257 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	STUB1	Q9UNE7	303 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	FZD9	O00144	591 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	MPPED2	Q15777	294 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	TLCD1	Q96CP7	247 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	MICU1	Q9BPX6	476 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	OPA3	Q9H6K4	179 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	PAH	P00439	452 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	RAB5B	P61020	215 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	NTHL1	P78549	312 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	GPR50	Q13585	617 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	OR5M10	Q6IEU7	315 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	METTL25	Q8N6Q8	603 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	CDKN2C	P42773	168 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	HOXA1	P49639	335 aa	Predicted RBP	13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	P2RX1	P51575	399 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	PCGF3	Q3KNV8	242 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	ZNF845	Q96IR2	970 aa	Predicted RBP	13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	CCDC32	Q9BV29	185 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	C14orf119	Q9NWQ9	140 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	PCDHGA1	Q9Y5H4	931 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	MRPL33	O75394	65 aa	Known RBP	13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	MMP2	P08253	660 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	ARSA	P15289	507 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	PCBD1	P61457	104 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	RING1	Q06587	406 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	XKR5	Q6UX68	686 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	NRM	Q8IXM6	262 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	RBMXL3	Q8N7X1	1067 aa	Known RBP	13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	PSMF1	Q92530	271 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	NAT6	Q93015	286 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	PHOX2B	Q99453	314 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	VRK1	Q99986	396 aa	Predicted RBP	13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	UTP23	Q9BRU9	249 aa	Known RBP	13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	C5AR2	Q9P296	337 aa		13.11	□□□□□ -0.31
NRXN1-222	ENST00000625672	HSPB6	O14558	160 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	DVL2	O14641	736 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	ETFA	P13804	333 aa		13.1	□□□□□ -0.31
NRXN1-222	ENST00000625672	DNASE1	P24855	282 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms