RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 MESP1Q9BRJ9 268 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 SPATA5L1Q9BVQ7 753 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 UGT2B28Q9BY64 529 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 RASSF4Q9H2L5 321 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 RNPEPL1Q9HAU8 725 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 CCM2LQ9NUG4 571 aaPredicted RBP10.56□□□□□ -0.72
SLIRP-212ENST00000613856 RYDENQ9NUL5 291 aaKnown RBP10.56□□□□□ -0.72
SLIRP-212ENST00000613856 ARMC1Q9NVT9 282 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 ADPRHL2Q9NX46 363 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 ZNF223Q9UK11 482 aaPredicted RBP10.56□□□□□ -0.72
SLIRP-212ENST00000613856 LRBAP50851 2863 aa10.56□□□□□ -0.72
SLIRP-212ENST00000613856 C2orf92A0A1B0GVN3 265 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 GXYLT2A0PJZ3 443 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 ZNF891A8MT65 544 aaPredicted RBP10.55□□□□□ -0.72
SLIRP-212ENST00000613856 TMEM229AB2RXF0 380 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 M0QX08 132 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 STX11O75558 287 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 SERPINB7O75635 380 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 KCNK2O95069 426 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 AGFG2O95081 481 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 MFN2O95140 757 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 SEMG1P04279 462 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 RAP2AP10114 183 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 POU3F2P20265 443 aaPredicted RBP10.55□□□□□ -0.72
SLIRP-212ENST00000613856 RPS4Y1P22090 263 aaKnown RBP10.55□□□□□ -0.72
SLIRP-212ENST00000613856 F8A1P23610 371 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 LCN1P31025 176 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 ERFP50548 548 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 RPS18P62269 152 aaKnown RBP10.55□□□□□ -0.72
SLIRP-212ENST00000613856 SELENOWP63302 87 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 RNF4P78317 190 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 RCN1Q15293 331 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.55□□□□□ -0.72
SLIRP-212ENST00000613856 FAM98BQ52LJ0 330 aaKnown RBP10.55□□□□□ -0.72
SLIRP-212ENST00000613856 FAM69BQ5VUD6 431 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 HLA-DQA1Q5Y7H0 255 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 PLAG1Q6DJT9 500 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 TYW3Q6IPR3 259 aaKnown RBP10.55□□□□□ -0.72
SLIRP-212ENST00000613856 KIRREL2Q6UWL6 708 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 ENPP6Q6UWR7 440 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 HSDL2Q6YN16 418 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 NDUFAF7Q7L592 441 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 GALNT10Q86SR1 603 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 RAB43Q86YS6 212 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 ZNF619Q8N2I2 560 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 M1APQ8TC57 530 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 ELP5Q8TE02 316 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 CANT1Q8WVQ1 401 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 LZICQ8WZA0 190 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 PIK3R3Q92569 461 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 KIAA1143Q96AT1 154 aaPredicted RBP10.55□□□□□ -0.72
SLIRP-212ENST00000613856 HSPBAP1Q96EW2 488 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 RMND5BQ96G75 393 aaPredicted RBP10.55□□□□□ -0.72
SLIRP-212ENST00000613856 PYURFQ96I23 114 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 HSH2DQ96JZ2 352 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 COL21A1Q96P44 957 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 DOHHQ9BU89 302 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 G6PC3Q9BUM1 346 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 EFHD1Q9BUP0 239 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 NXF5Q9H1B4 397 aaKnown RBP10.55□□□□□ -0.72
SLIRP-212ENST00000613856 MMP25Q9NPA2 562 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 STX18Q9P2W9 335 aaKnown RBP10.55□□□□□ -0.72
SLIRP-212ENST00000613856 CBLCQ9ULV8 474 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 WDR45Q9Y484 360 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 PCDHGA10Q9Y5H3 936 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 ANKRD17O75179 2603 aaKnown RBP10.55□□□□□ -0.72
SLIRP-212ENST00000613856 PCSK5Q92824 1860 aa10.55□□□□□ -0.72
SLIRP-212ENST00000613856 ESPL1Q14674 2120 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 NSG1A0A0A6YYJ2 146 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 TRBV11-1A0A0K0K1C0 115 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 ENO4A6NNW6 628 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 PRKD3O94806 890 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 ZNF682O95780 498 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 HPP00738 406 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 OPN1SWP03999 348 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 ALPPP05187 535 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 THBS1P07996 1170 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 FCGR1AP12314 374 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 CD247P20963 164 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 MAGEA2P43356 314 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 CHRNEQ04844 493 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 CHRNB3Q05901 458 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 IL10RAQ13651 578 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 DECR1Q16698 335 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 TBCELQ5QJ74 424 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 MRGPREQ86SM8 312 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 ARMC8Q8IUR7 673 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 FAM86B1Q8N7N1 296 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 OR5L2Q8NGL0 311 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 ADAMTS17Q8TE56 1095 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 SLC47A1Q96FL8 570 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 IP6K3Q96PC2 410 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 GAL3ST4Q96RP7 486 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 YY1AP1Q9H869 796 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 TRIM45Q9H8W5 580 aaPredicted RBP10.54□□□□□ -0.72
SLIRP-212ENST00000613856 MTHFD2LQ9H903 347 aaPredicted RBP10.54□□□□□ -0.72
SLIRP-212ENST00000613856 GPN2Q9H9Y4 310 aaPredicted RBP10.54□□□□□ -0.72
SLIRP-212ENST00000613856 SEC14L3Q9UDX4 400 aa10.54□□□□□ -0.72
SLIRP-212ENST00000613856 MRTO4Q9UKD2 239 aaKnown RBP10.54□□□□□ -0.72
SLIRP-212ENST00000613856 BAG5Q9UL15 447 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms