RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 CACYBPQ9HB71 228 aaKnown RBP12.45□□□□□ -0.42
VMP1-217ENST00000593168 CNOT11Q9UKZ1 510 aaKnown RBP12.45□□□□□ -0.42
VMP1-217ENST00000593168 MKLN1Q9UL63 735 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 ZNF232Q9UNY5 417 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 PTRH2Q9Y3E5 179 aaKnown RBP12.45□□□□□ -0.42
VMP1-217ENST00000593168 IGHV3-20A0A0C4DH32 117 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 C2orf92A0A1B0GVN3 265 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 FRG2CA6NGY1 282 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 AGAP5A6NIR3 686 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 TO15178 435 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 KIAA0513O60268 411 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 LGI1O95970 557 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 DBIP07108 87 aaKnown RBP12.44□□□□□ -0.42
VMP1-217ENST00000593168 UMODP07911 640 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 THBS1P07996 1170 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 RPS4Y1P22090 263 aaKnown RBP12.44□□□□□ -0.42
VMP1-217ENST00000593168 PRKAR1BP31321 381 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 PIGAP37287 484 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 PSPHP78330 225 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 EBPQ15125 230 aaKnown RBP12.44□□□□□ -0.42
VMP1-217ENST00000593168 ZNF311Q5JNZ3 666 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 CCNJQ5T5M9 372 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 HLA-DQA1Q5Y7H0 255 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 OR2T5Q6IEZ7 315 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 FIGNL1Q6PIW4 674 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 PAPD4Q6PIY7 484 aaKnown RBP12.44□□□□□ -0.42
VMP1-217ENST00000593168 DHRS4L2Q6PKH6 230 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 SLC29A4Q7RTT9 530 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 C17orf47Q8NEP4 570 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 OR4N2Q8NGD1 307 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 OR2T29Q8NH02 315 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 OIT3Q8WWZ8 545 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 EME1Q96AY2 570 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 ZG16BQ96DA0 208 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 RMND5BQ96G75 393 aaPredicted RBP12.44□□□□□ -0.42
VMP1-217ENST00000593168 VMP1Q96GC9 406 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 ZNF300Q96RE9 604 aaPredicted RBP12.44□□□□□ -0.42
VMP1-217ENST00000593168 C8orf4Q9NR00 106 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 FBXO34Q9NWN3 711 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 NDUFAF4Q9P032 175 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 FOXJ2Q9P0K8 574 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 CBLCQ9ULV8 474 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 SH3GLB1Q9Y371 365 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 OR10H1Q9Y4A9 318 aa12.44□□□□□ -0.42
VMP1-217ENST00000593168 A0A1W2PQ72 361 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 PRAMEF25A6NGN4 478 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 hCG_2039718K7EN88 272 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 GNGT2O14610 69 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 IFNW1P05000 195 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 FAM87AP0C7U9 286 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 TCN2P20062 427 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 ATP6V1C1P21283 382 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 MMP11P24347 488 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 CD82P27701 267 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 FOLR3P41439 243 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 PSMD4P55036 377 aaKnown RBP12.43□□□□□ -0.42
VMP1-217ENST00000593168 LARS2Q15031 903 aaKnown RBP12.43□□□□□ -0.42
VMP1-217ENST00000593168 GPR68Q15743 365 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.43□□□□□ -0.42
VMP1-217ENST00000593168 LRRC36Q1X8D7 754 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 GRAMD1BQ3KR37 738 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 TSEN54Q7Z6J9 526 aaKnown RBP12.43□□□□□ -0.42
VMP1-217ENST00000593168 C9orf40Q8IXQ3 194 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 NLGN4XQ8N0W4 816 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 BCORP1Q8N888 145 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 APCDD1LQ8NCL9 501 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 ICA1LQ8NDH6 482 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 NLGN4YQ8NFZ3 816 aaPredicted RBP12.43□□□□□ -0.42
VMP1-217ENST00000593168 OR8K3Q8NH51 312 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 NUBPLQ8TB37 319 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 CT55Q8WUE5 264 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 TP53INP1Q96A56 240 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 NACC2Q96BF6 587 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 HSPBAP1Q96EW2 488 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 ARHGAP9Q9BRR9 750 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 C9orf16Q9BUW7 83 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 GPR87Q9BY21 358 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 AMBRA1Q9C0C7 1298 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 QRSL1Q9H0R6 528 aaKnown RBP12.43□□□□□ -0.42
VMP1-217ENST00000593168 MRTO4Q9UKD2 239 aaKnown RBP12.43□□□□□ -0.42
VMP1-217ENST00000593168 ABCG2Q9UNQ0 655 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 FARSAQ9Y285 508 aaKnown RBP12.43□□□□□ -0.42
VMP1-217ENST00000593168 SLC9A8Q9Y2E8 581 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 DTNAQ9Y4J8 743 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 PCDHGA10Q9Y5H3 936 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 ENPP4Q9Y6X5 453 aa12.43□□□□□ -0.42
VMP1-217ENST00000593168 NBPF19A0A087WUL8 3843 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 FLNCQ14315 2725 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 C21orf140B9A014 251 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 NPIPB9F8W1W9 429 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 H0YJX3 145 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 ACOX3O15254 700 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 IL33O95760 270 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 IGKV1D-16P01601 117 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 ITGB2P05107 769 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 IL7RP16871 459 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 ZNF26P17031 533 aaPredicted RBP12.42□□□□□ -0.42
VMP1-217ENST00000593168 RHCEP18577 417 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 LCN1P31025 176 aa12.42□□□□□ -0.42
VMP1-217ENST00000593168 OR1E2P47887 323 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms