RNA–Protein interactions for RNA: ENST00000590485.1

SAFB-208, Transcript of scaffold attachment factor B, humanhuman

TSL 3

Gene SAFB, Length 548 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-208ENST00000590485 KPNA3O00505 521 aaPredicted RBP3.81□□□□□ -1.8
SAFB-208ENST00000590485 NTN3O00634 580 aaPredicted RBP3.81□□□□□ -1.8
SAFB-208ENST00000590485 PDXKO00764 312 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 MAPK13O15264 365 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 AQP9O43315 295 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 LBPP18428 481 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 TIA1P31483 386 aaKnown RBP eCLIP3.81□□□□□ -1.8
SAFB-208ENST00000590485 RABIFP47224 123 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 GCLMP48507 274 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 PLK1P53350 603 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 ERVK11-1P61568 191 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 BST2Q10589 180 aaKnown RBP3.81□□□□□ -1.8
SAFB-208ENST00000590485 FZD2Q14332 565 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 EFTUD2Q15029 972 aaKnown RBP eCLIP3.81□□□□□ -1.89e-7■■■■□ 24.9
SAFB-208ENST00000590485 KIF26BQ2KJY2 2108 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 GOLGA7BQ2TAP0 167 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 C1orf220Q5T0J3 134 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 WLSQ5T9L3 541 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 OR6B2Q6IFH4 312 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 FAM166AQ6J272 317 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 CYB5D1Q6P9G0 228 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 GCNT7Q6ZNI0 430 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 VASH2Q86V25 355 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 PARGQ86W56 976 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 CROCCP3Q8IVE0 287 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 LRTM2Q8N967 370 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 GOT1L1Q8NHS2 421 aaPredicted RBP3.81□□□□□ -1.8
SAFB-208ENST00000590485 UBA3Q8TBC4 463 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 LMX1AQ8TE12 382 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 MR1Q95460 341 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 TMEM159Q96B96 161 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 SERPINB11Q96P15 392 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 NDNQ99608 321 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 SLC17A9Q9BYT1 436 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 SYNDIG1Q9H7V2 258 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 MAGEF1Q9HAY2 307 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 DYRK4Q9NR20 520 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 SPASTQ9UBP0 616 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 IL36AQ9UHA7 158 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 PRDM4Q9UKN5 801 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 TSPAN16Q9UKR8 245 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 ELF5Q9UKW6 265 aaPredicted RBP3.81□□□□□ -1.8
SAFB-208ENST00000590485 KIAA1257Q9ULG3 409 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 SELENOKQ9Y6D0 94 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 COLEC10Q9Y6Z7 277 aa3.81□□□□□ -1.8
SAFB-208ENST00000590485 NYNRINQ9P2P1 1898 aaKnown RBP3.81□□□□□ -1.8
SAFB-208ENST00000590485 COL12A1Q99715 3063 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 D6RAR5 112 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 LMO7DNF2Z398 122 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 F5H5T6 163 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 CASC3O15234 703 aaKnown RBP3.8□□□□□ -1.8
SAFB-208ENST00000590485 ARHGEF9O43307 516 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 CALUO43852 315 aaPredicted RBP3.8□□□□□ -1.8
SAFB-208ENST00000590485 ZNF821O75541 412 aaPredicted RBP3.8□□□□□ -1.8
SAFB-208ENST00000590485 MOCS2O96007 188 aaPredicted RBP3.8□□□□□ -1.8
SAFB-208ENST00000590485 APOEP02649 317 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 YES1P07947 543 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 TRIM49P0CI25 452 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 TRIM49CP0CI26 452 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 VDRP11473 427 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 KRT13P13646 458 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 F3P13726 295 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 ELAVL4P26378 380 aaKnown RBP3.8□□□□□ -1.8
SAFB-208ENST00000590485 CD82P27701 267 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 PSMB4P28070 264 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 CASP1P29466 404 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 SSTR1P30872 391 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 CHRNA3P32297 505 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 GTF2H1P32780 548 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 MMP12P39900 470 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 TSFMP43897 325 aaKnown RBP3.8□□□□□ -1.8
SAFB-208ENST00000590485 NUMBP49757 651 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 CLDN17P56750 224 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 DCDC1P59894 354 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 YWHAEP62258 255 aaKnown RBP3.8□□□□□ -1.8
SAFB-208ENST00000590485 RPS21P63220 83 aaKnown RBP3.8□□□□□ -1.8
SAFB-208ENST00000590485 CCL7P80098 99 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 ENPEPQ07075 957 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 C1orf61Q13536 156 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 STK38Q15208 465 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 SEL1L3Q68CR1 1132 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 FAM173BQ6P4H8 233 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 BTNL8Q6UX41 500 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 PIGWQ7Z7B1 504 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 ZSCAN30Q86W11 494 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 ZFAND4Q86XD8 727 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 PRSS35Q8N3Z0 413 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 GBP7Q8N8V2 638 aaPredicted RBP3.8□□□□□ -1.8
SAFB-208ENST00000590485 OR6C4Q8NGE1 309 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 OR2A12Q8NGT7 310 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 DQX1Q8TE96 717 aaKnown RBP3.8□□□□□ -1.8
SAFB-208ENST00000590485 HTR3CQ8WXA8 447 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 ZNF486Q96H40 463 aaPredicted RBP3.8□□□□□ -1.8
SAFB-208ENST00000590485 PPP1R16AQ96I34 528 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 BTN2A3PQ96KV6 586 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 HSFY1Q96LI6 401 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 USP28Q96RU2 1077 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 OPRPNQ99935 248 aaPredicted RBP3.8□□□□□ -1.8
SAFB-208ENST00000590485 FEM1AQ9BSK4 669 aa3.8□□□□□ -1.8
SAFB-208ENST00000590485 MLPHQ9BV36 600 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms