RNA–Protein interactions for RNA: ENST00000588965.5

FARSA-208, Transcript of phenylalanyl-tRNA synthetase subunit alpha, humanhuman

TSL 5

Gene FARSA, Length 1,831 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARSA-208ENST00000588965 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.26■□□□□ 0.51
FARSA-208ENST00000588965 MRPL2Q5T653 305 aaKnown RBP18.26■□□□□ 0.51
FARSA-208ENST00000588965 WLSQ5T9L3 541 aa18.26■□□□□ 0.51
FARSA-208ENST00000588965 AP1ARQ63HQ0 302 aa18.26■□□□□ 0.51
FARSA-208ENST00000588965 ZNF605Q86T29 641 aa18.26■□□□□ 0.51
FARSA-208ENST00000588965 MARCH9Q86YJ5 346 aa18.26■□□□□ 0.51
FARSA-208ENST00000588965 VMP1Q96GC9 406 aa18.26■□□□□ 0.51
FARSA-208ENST00000588965 RBM4BQ9BQ04 359 aaKnown RBP18.26■□□□□ 0.51
FARSA-208ENST00000588965 RBM4Q9BWF3 364 aaKnown RBP18.26■□□□□ 0.51
FARSA-208ENST00000588965 SPRY4Q9C004 299 aa18.26■□□□□ 0.51
FARSA-208ENST00000588965 SEMA4CQ9C0C4 833 aa18.26■□□□□ 0.51
FARSA-208ENST00000588965 ARMC7Q9H6L4 198 aa18.26■□□□□ 0.51
FARSA-208ENST00000588965 LIN28AQ9H9Z2 209 aaKnown RBP18.26■□□□□ 0.51
FARSA-208ENST00000588965 CTPS2Q9NRF8 586 aa18.26■□□□□ 0.51
FARSA-208ENST00000588965 ZNF223Q9UK11 482 aaPredicted RBP18.26■□□□□ 0.51
FARSA-208ENST00000588965 MRTO4Q9UKD2 239 aaKnown RBP18.26■□□□□ 0.51
FARSA-208ENST00000588965 CFAP54Q96N23 3096 aa18.25■□□□□ 0.51
FARSA-208ENST00000588965 CCDC88CQ9P219 2028 aa18.25■□□□□ 0.51
FARSA-208ENST00000588965 HS6ST1O60243 411 aa18.25■□□□□ 0.51
FARSA-208ENST00000588965 ALPLP05186 524 aa18.25■□□□□ 0.51
FARSA-208ENST00000588965 FUT4P22083 530 aa18.25■□□□□ 0.51
FARSA-208ENST00000588965 SLC26A5P58743 744 aa18.25■□□□□ 0.51
FARSA-208ENST00000588965 HOXC5Q00444 222 aa18.25■□□□□ 0.51
FARSA-208ENST00000588965 PIN1Q13526 163 aaPredicted RBP18.25■□□□□ 0.51
FARSA-208ENST00000588965 NPTX1Q15818 432 aa18.25■□□□□ 0.51
FARSA-208ENST00000588965 EXOC3L2Q2M3D2 409 aa18.25■□□□□ 0.51
FARSA-208ENST00000588965 ANKRD34AQ69YU3 496 aa18.25■□□□□ 0.51
FARSA-208ENST00000588965 TAGAPQ8N103 731 aa18.25■□□□□ 0.51
FARSA-208ENST00000588965 PHF10Q8WUB8 498 aaKnown RBP18.25■□□□□ 0.51
FARSA-208ENST00000588965 NRBF2Q96F24 287 aa18.25■□□□□ 0.51
FARSA-208ENST00000588965 PRR14Q9BWN1 585 aa18.25■□□□□ 0.51
FARSA-208ENST00000588965 OSBPL10Q9BXB5 764 aa18.25■□□□□ 0.51
FARSA-208ENST00000588965 ACER3Q9NUN7 267 aa18.25■□□□□ 0.51
FARSA-208ENST00000588965 SMPD3Q9NY59 655 aaPredicted RBP18.25■□□□□ 0.51
FARSA-208ENST00000588965 RAB26Q9ULW5 256 aa18.25■□□□□ 0.51
FARSA-208ENST00000588965 AP4B1Q9Y6B7 739 aa18.25■□□□□ 0.51
FARSA-208ENST00000588965 TRBV11-1A0A0K0K1C0 115 aa18.24■□□□□ 0.51
FARSA-208ENST00000588965 IL33O95760 270 aa18.24■□□□□ 0.51
FARSA-208ENST00000588965 ATP12AP54707 1039 aa18.24■□□□□ 0.51
FARSA-208ENST00000588965 PSMD4P55036 377 aaKnown RBP18.24■□□□□ 0.51
FARSA-208ENST00000588965 RPS18P62269 152 aaKnown RBP18.24■□□□□ 0.51
FARSA-208ENST00000588965 PPP2R2BQ00005 443 aa18.24■□□□□ 0.51
FARSA-208ENST00000588965 RNF220Q5VTB9 566 aa18.24■□□□□ 0.51
FARSA-208ENST00000588965 OR4C3Q8NH37 302 aa18.24■□□□□ 0.51
FARSA-208ENST00000588965 THAP3Q8WTV1 239 aaPredicted RBP18.24■□□□□ 0.51
FARSA-208ENST00000588965 ZNF570Q96NI8 536 aa18.24■□□□□ 0.51
FARSA-208ENST00000588965 NMNAT1Q9HAN9 279 aaPredicted RBP18.24■□□□□ 0.51
FARSA-208ENST00000588965 KCND3Q9UK17 655 aa18.24■□□□□ 0.51
FARSA-208ENST00000588965 PPIEQ9UNP9 301 aaKnown RBP18.24■□□□□ 0.51
FARSA-208ENST00000588965 LRCH1Q9Y2L9 728 aa18.24■□□□□ 0.51
FARSA-208ENST00000588965 PCDHGA10Q9Y5H3 936 aa18.24■□□□□ 0.51
FARSA-208ENST00000588965 LOC102723996A0A087X1L8 192 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 CDHR4A6H8M9 788 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 DLGAP1O14490 977 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 REM1O75628 298 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 HPRP00739 348 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 KRT20P35900 424 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 NOVA1P51513 510 aaKnown RBP18.23■□□□□ 0.51
FARSA-208ENST00000588965 PLCXD2Q0VAA5 305 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 FGD3Q5JSP0 725 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 COLEC12Q5KU26 742 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 TMPRSS12Q86WS5 348 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 ESX1Q8N693 406 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 OR4C15Q8NGM1 316 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 ADOQ96SZ5 270 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 FNDC11Q9BVV2 318 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 OSBPL11Q9BXB4 747 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 Q9H521 79 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 KIF17Q9P2E2 1029 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 A4GNTQ9UNA3 340 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 HS3ST3B1Q9Y662 390 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 AP3D1O14617 1153 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 PCDH17O14917 1159 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 TPST2O60704 377 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 SNAP29O95721 258 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 H1F0P07305 194 aaKnown RBP18.23■□□□□ 0.51
FARSA-208ENST00000588965 CEACAM1P13688 526 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 IL12BP29460 328 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 RPS15P62841 145 aaKnown RBP18.23■□□□□ 0.51
FARSA-208ENST00000588965 PCOLCEQ15113 449 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 ZNF141Q15928 474 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 ZIK1Q3SY52 487 aaPredicted RBP18.23■□□□□ 0.51
FARSA-208ENST00000588965 NHSL2Q5HYW2 709 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 ZNF441Q8N8Z8 693 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 ATG16L2Q8NAA4 619 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 GIPC3Q8TF64 312 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 DIO2Q92813 273 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 HSPBAP1Q96EW2 488 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 PRRC1Q96M27 445 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 ALPK1Q96QP1 1244 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 GABARAPL1Q9H0R8 117 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.23■□□□□ 0.51
FARSA-208ENST00000588965 USE1Q9NZ43 259 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 TCFL5Q9UL49 500 aa18.23■□□□□ 0.51
FARSA-208ENST00000588965 CPSF4LA6NMK7 179 aaKnown RBP18.22■□□□□ 0.51
FARSA-208ENST00000588965 NPIPB9F8W1W9 429 aa18.22■□□□□ 0.51
FARSA-208ENST00000588965 TO15178 435 aa18.22■□□□□ 0.51
FARSA-208ENST00000588965 RPSAP08865 295 aaKnown RBP18.22■□□□□ 0.51
FARSA-208ENST00000588965 RAB40ALP0C0E4 278 aa18.22■□□□□ 0.51
FARSA-208ENST00000588965 GKN3PP0CG01 181 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms