RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 YIPF4Q9BSR8 244 aa15.33■□□□□ 0.04
TRIM47-203ENST00000586495 RTN4RQ9BZR6 473 aa15.33■□□□□ 0.04
TRIM47-203ENST00000586495 GALNT8Q9NY28 637 aa15.33■□□□□ 0.04
TRIM47-203ENST00000586495 NTMQ9P121 344 aa15.33■□□□□ 0.04
TRIM47-203ENST00000586495 SLC17A7Q9P2U7 560 aa15.33■□□□□ 0.04
TRIM47-203ENST00000586495 STOML1Q9UBI4 398 aa15.33■□□□□ 0.04
TRIM47-203ENST00000586495 LGALS13Q9UHV8 139 aa15.33■□□□□ 0.04
TRIM47-203ENST00000586495 ZNF337Q9Y3M9 751 aa15.33■□□□□ 0.04
TRIM47-203ENST00000586495 A0A1W2PNV4 684 aa15.32■□□□□ 0.04
TRIM47-203ENST00000586495 OR2M5A3KFT3 312 aa15.32■□□□□ 0.04
TRIM47-203ENST00000586495 A8MXE2 369 aa15.32■□□□□ 0.04
TRIM47-203ENST00000586495 MSTNO14793 375 aa15.32■□□□□ 0.04
TRIM47-203ENST00000586495 PIP5K1BO14986 540 aa15.32■□□□□ 0.04
TRIM47-203ENST00000586495 BCKDHAP12694 445 aa15.32■□□□□ 0.04
TRIM47-203ENST00000586495 LCN1P31025 176 aa15.32■□□□□ 0.04
TRIM47-203ENST00000586495 MAP3K8P41279 467 aa15.32■□□□□ 0.04
TRIM47-203ENST00000586495 RPS3AP61247 264 aaKnown RBP15.32■□□□□ 0.04
TRIM47-203ENST00000586495 VSNL1P62760 191 aa15.32■□□□□ 0.04
TRIM47-203ENST00000586495 GRAMD1BQ3KR37 738 aa15.32■□□□□ 0.04
TRIM47-203ENST00000586495 UGT3A2Q3SY77 523 aa15.32■□□□□ 0.04
TRIM47-203ENST00000586495 CHDHQ8NE62 594 aaPredicted RBP15.32■□□□□ 0.04
TRIM47-203ENST00000586495 OR6Y1Q8NGX8 325 aa15.32■□□□□ 0.04
TRIM47-203ENST00000586495 MECRQ9BV79 373 aa15.32■□□□□ 0.04
TRIM47-203ENST00000586495 CXXC4Q9H2H0 198 aa15.32■□□□□ 0.04
TRIM47-203ENST00000586495 LIME1Q9H400 295 aa15.32■□□□□ 0.04
TRIM47-203ENST00000586495 NDRG3Q9UGV2 375 aa15.32■□□□□ 0.04
TRIM47-203ENST00000586495 MED12LQ86YW9 2145 aa15.32■□□□□ 0.04
TRIM47-203ENST00000586495 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 IGLV3-32A0A0A0MS00 114 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 TMEM233B4DJY2 109 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 ALG1L2C9J202 215 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 H3BML4 177 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 CASKO14936 926 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 SEC14L5O43304 696 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 NDUFB5O43674 189 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 SPAG7O75391 227 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 TNFSF13O75888 250 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 IGKV1D-16P01601 117 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 NGFRP08138 427 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 ALOX5P09917 674 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 HPCAL1P37235 193 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 PRIM2P49643 509 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 OCRLQ01968 901 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 MLC1Q15049 377 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.31■□□□□ 0.04
TRIM47-203ENST00000586495 CAMKMTQ7Z624 323 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 NATD1Q8N6N6 113 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 CNEP1R1Q8N9A8 125 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 GIMAP5Q96F15 307 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 PINK1Q9BXM7 581 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 ATP6V1HQ9UI12 483 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 PLEKHA6Q9Y2H5 1048 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 ZNF175Q9Y473 711 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 AP4B1Q9Y6B7 739 aa15.31■□□□□ 0.04
TRIM47-203ENST00000586495 A0A1W2PRB8 838 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 SH3D21A4FU49 640 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 PEX11AO75192 247 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 SMNDC1O75940 238 aaKnown RBP eCLIP15.3■□□□□ 0.04
TRIM47-203ENST00000586495 KCNK2O95069 426 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 OXSR1O95747 527 aaPredicted RBP15.3■□□□□ 0.04
TRIM47-203ENST00000586495 HSPA4LO95757 839 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 ACP2P11117 423 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 HPGDP15428 266 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 CPOXP36551 454 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 SERPINB4P48594 390 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 SUCLG1P53597 346 aaKnown RBP15.3■□□□□ 0.04
TRIM47-203ENST00000586495 CLDN15P56746 228 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 AKAP6Q13023 2319 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 FGFBP1Q14512 234 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 ATP6AP1LQ52LC2 224 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 MFSD12Q6NUT3 480 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 EMBQ6PCB8 327 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 APOOLQ6UXV4 268 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 ZCCHC23Q6ZST2 131 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 EXOC3L1Q86VI1 746 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 MISPQ8IVT2 679 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 SLC16A11Q8NCK7 471 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 OR5M1Q8NGP8 315 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 OR4C3Q8NH37 302 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 FAM110BQ8TC76 370 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 AGR3Q8TD06 166 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 SMPDL3BQ92485 455 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 FIG4Q92562 907 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 ZCCHC3Q9NUD5 404 aaKnown RBP15.3■□□□□ 0.04
TRIM47-203ENST00000586495 ATAD3AQ9NVI7 634 aa15.3■□□□□ 0.04
TRIM47-203ENST00000586495 HIVEP1P15822 2718 aa15.29■□□□□ 0.04
TRIM47-203ENST00000586495 A0A087WZY1 265 aa15.29■□□□□ 0.04
TRIM47-203ENST00000586495 SCAMP2O15127 329 aaKnown RBP15.29■□□□□ 0.04
TRIM47-203ENST00000586495 GMFGO60234 142 aa15.29■□□□□ 0.04
TRIM47-203ENST00000586495 LYPLA1O75608 230 aaPredicted RBP15.29■□□□□ 0.04
TRIM47-203ENST00000586495 SOX30O94993 753 aa15.29■□□□□ 0.04
TRIM47-203ENST00000586495 SLU7O95391 586 aaKnown RBP15.29■□□□□ 0.04
TRIM47-203ENST00000586495 TBXA2RP21731 343 aa15.29■□□□□ 0.04
TRIM47-203ENST00000586495 PCYT1AP49585 367 aa15.29■□□□□ 0.04
TRIM47-203ENST00000586495 SGCBQ16585 318 aa15.29■□□□□ 0.04
TRIM47-203ENST00000586495 DUSP5Q16690 384 aa15.29■□□□□ 0.04
TRIM47-203ENST00000586495 XKR7Q5GH72 579 aa15.29■□□□□ 0.04
TRIM47-203ENST00000586495 FIGNL1Q6PIW4 674 aa15.29■□□□□ 0.04
TRIM47-203ENST00000586495 GALNT10Q86SR1 603 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms