RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 KIAA0513O60268 411 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 ABCB7O75027 752 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 LDLRP01130 860 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 FABP3P05413 133 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 PABPC4LP0CB38 370 aaKnown RBP12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 NAGAP17050 411 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 PRKAR1BP31321 381 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 RFX3P48380 749 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 CLK3P49761 638 aaKnown RBP12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 NR0B1P51843 470 aaKnown RBP12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 FUT5Q11128 374 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 CHAF1BQ13112 559 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 RPS26P11Q5JNZ5 115 aaPredicted RBP12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 DCAF10Q5QP82 559 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 FBXW10Q5XX13 1052 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 TYW3Q6IPR3 259 aaKnown RBP12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 FIGNL1Q6PIW4 674 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 ENPP6Q6UWR7 440 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 FRRS1Q6ZNA5 592 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 CYP4Z1Q86W10 505 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 ZDHHC21Q8IVQ6 265 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 C9orf40Q8IXQ3 194 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 PQLC1Q8N2U9 271 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 SLC15A4Q8N697 577 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 BCORP1Q8N888 145 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 TMEM102Q8N9M5 508 aaPredicted RBP12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 APCDD1LQ8NCL9 501 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 CATSPER1Q8NEC5 780 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 OR52P1PQ8NH57 321 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 FAM110BQ8TC76 370 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 NR4A3Q92570 626 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 ZNF354BQ96LW1 612 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 ZNF347Q96SE7 839 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 RUBCNLQ9H714 662 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 IL1RAPQ9NPH3 570 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 MKLN1Q9UL63 735 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 ANKRD11Q6UB99 2663 aaPredicted RBP12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 DMXL2Q8TDJ6 3036 aa12.86□□□□□ -0.35
CSNK1D-209ENST00000578904 GXYLT2A0PJZ3 443 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 PRAMEF27A3QJZ7 478 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 H3BNH8 94 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 MASP2O00187 686 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 REM1O75628 298 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 IL33O95760 270 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 OPN1SWP03999 348 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 IFNW1P05000 195 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 FESP07332 822 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 KCNJ5P48544 419 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 ARHGDIAP52565 204 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 PNLIPRP2P54317 469 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 ATP12AP54707 1039 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 PLCXD2Q0VAA5 305 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 AIMP2Q13155 320 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 EFR3AQ14156 821 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 MAPK11Q15759 364 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 DHRS4L2Q6PKH6 230 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 NPSR1Q6W5P4 371 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 PIWIL3Q7Z3Z3 882 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 CMIPQ8IY22 773 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 DND1Q8IYX4 353 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 ZNF321PQ8N8H1 164 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 ELP5Q8TE02 316 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 IMMP1LQ96LU5 166 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 ING2Q9H160 280 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 NXF5Q9H1B4 397 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 VCXQ9H320 206 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 ATP13A2Q9NQ11 1180 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 UBQLN4Q9NRR5 601 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 DTX4Q9Y2E6 619 aa12.85□□□□□ -0.35
CSNK1D-209ENST00000578904 EXPH5Q8NEV8 1989 aa12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 AGAP5A6NIR3 686 aa12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 H3BNX3 289 aa12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 SCDO00767 359 aa12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 FCMRO60667 390 aa12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 NME6O75414 186 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 GCM2O75603 506 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 CST1P01037 141 aa12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 CELA2AP08217 269 aa12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 ITGA3P26006 1051 aa12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 SMIM11AP58511 58 aa12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 RPP38P78345 283 aaKnown RBP12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 KCNJ10P78508 379 aa12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 GK3PQ14409 553 aa12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 CCNJQ5T5M9 372 aa12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 JMJD6Q6NYC1 403 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 GALNT10Q86SR1 603 aa12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 SLC5A8Q8N695 610 aa12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 SMYD1Q8NB12 490 aa12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 DIO2Q92813 273 aa12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 SLCO4A1Q96BD0 722 aa12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 SDCCAG3Q96C92 435 aa12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 CENPNQ96H22 339 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 C8orf4Q9NR00 106 aa12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 DNAJB9Q9UBS3 223 aa12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 ZNF443Q9Y2A4 671 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 SH3GLB1Q9Y371 365 aa12.84□□□□□ -0.35
CSNK1D-209ENST00000578904 PTPRQQ9UMZ3 2332 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 OR6C70A6NIJ9 312 aa12.83□□□□□ -0.36
CSNK1D-209ENST00000578904 ADAMDEC1O15204 470 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms