RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 LRRC74BQ6ZQY2 392 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 SLC30A8Q8IWU4 369 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 ZADH2Q8N4Q0 377 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 GATSQ8NAP1 163 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 CATSPER1Q8NEC5 780 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 OR4C3Q8NH37 302 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 C9orf43Q8TAL5 461 aaPredicted RBP11.14□□□□□ -0.63
IFT20-207ENST00000578547 SPPL2AQ8TCT8 520 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 FIG4Q92562 907 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 C5orf34Q96MH7 638 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 HES7Q9BYE0 225 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 TBL1XR1Q9BZK7 514 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 RNF32Q9H0A6 362 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 ADNPQ9H2P0 1102 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 CACYBPQ9HB71 228 aaKnown RBP11.14□□□□□ -0.63
IFT20-207ENST00000578547 TIMMDC1Q9NPL8 285 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 ZNF71Q9NQZ8 489 aaPredicted RBP11.14□□□□□ -0.63
IFT20-207ENST00000578547 KLHL1Q9NR64 748 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 POLE3Q9NRF9 147 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 KLRF1Q9NZS2 232 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 TUBD1Q9UJT1 453 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 LHX6Q9UPM6 363 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 CHCHD2Q9Y6H1 151 aaPredicted RBP11.14□□□□□ -0.63
IFT20-207ENST00000578547 CNTRLQ7Z7A1 2325 aa11.14□□□□□ -0.63
IFT20-207ENST00000578547 KMT2BQ9UMN6 2715 aaPredicted RBP11.13□□□□□ -0.63
IFT20-207ENST00000578547 A0A0G2JPF8 293 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 C2orf72A6NCS6 295 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 HNRNPCL2B2RXH8 293 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 HNRNPCL3B7ZW38 293 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 CXCR6O00574 342 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 GSC2O15499 205 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 NEURL1O76050 574 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 OPN1SWP03999 348 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 P04436 131 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 HNRNPCL4P0DMR1 293 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 HSD17B1P14061 328 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 HTR1EP28566 365 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 CLK3P49761 638 aaKnown RBP11.13□□□□□ -0.63
IFT20-207ENST00000578547 TNFSF10P50591 281 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 ATP12AP54707 1039 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 KCNJ2P63252 427 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 LY6DQ14210 128 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 PDZK1Q5T2W1 519 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 INTS11Q5TA45 600 aaKnown RBP11.13□□□□□ -0.63
IFT20-207ENST00000578547 SLC22A10Q63ZE4 541 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 ASB18Q6ZVZ8 466 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 ZNF227Q86WZ6 799 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 KRT73Q86Y46 540 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 HPS6Q86YV9 775 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 PEX5LQ8IYB4 626 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 ARHGAP24Q8N264 748 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 METTL25Q8N6Q8 603 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 ZNF527Q8NB42 609 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 GOLM1Q8NBJ4 401 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 PSD4Q8NDX1 1056 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 MDS2Q8NDY4 140 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 TNIP2Q8NFZ5 429 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 GRHL3Q8TE85 626 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 HAS2Q92819 552 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 SGCZQ96LD1 299 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 CADM1Q9BY67 442 aaKnown RBP11.13□□□□□ -0.63
IFT20-207ENST00000578547 MFRPQ9BY79 579 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 PCDHAC1Q9H158 963 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 MTHFD2LQ9H903 347 aaPredicted RBP11.13□□□□□ -0.63
IFT20-207ENST00000578547 GALNT9Q9HCQ5 603 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 BCL2L10Q9HD36 194 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 UBQLN4Q9NRR5 601 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 SACM1LQ9NTJ5 587 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 RYDENQ9NUL5 291 aaKnown RBP11.13□□□□□ -0.63
IFT20-207ENST00000578547 CD300AQ9UGN4 299 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 PCDHGB7Q9Y5F8 929 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 PCDHGA10Q9Y5H3 936 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 NBEAQ8NFP9 2946 aa11.13□□□□□ -0.63
IFT20-207ENST00000578547 DSPPQ9NZW4 1301 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 A0A0G2JMM0 328 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 A0A1W2PPB8 328 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 A0A1W2PRS3 328 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 KIR3DP1A8MWS1 328 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 ARPC2O15144 300 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 GMNNO75496 209 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 UGT2B17O75795 530 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 PDE9AO76083 593 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 CD46P15529 392 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 TBXA2RP21731 343 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 ME2P23368 584 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 LCN1P31025 176 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 GPR85P60893 370 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 VEZF1Q14119 521 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 MAPK14Q16539 360 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 SPATS1Q496A3 300 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 ZNF766Q5HY98 468 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 PRAMEF8Q5VWM4 474 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 PRAMEF7Q5VXH5 474 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 IGFL3Q6UXB1 125 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 YTHDF3Q7Z739 585 aaKnown RBP11.12□□□□□ -0.63
IFT20-207ENST00000578547 PATL1Q86TB9 770 aaKnown RBP11.12□□□□□ -0.63
IFT20-207ENST00000578547 MARCH3Q86UD3 253 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 VRK2Q86Y07 508 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 ULK2Q8IYT8 1036 aa11.12□□□□□ -0.63
IFT20-207ENST00000578547 FBXW8Q8N3Y1 598 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms