RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 RNF32Q9H0A6 362 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 SLC38A1Q9H2H9 487 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ZNF552Q9H707 407 aaPredicted RBP10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 SH2D2AQ9NP31 389 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 EQTNQ9NQ60 294 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ADA2Q9NZK5 511 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 SUCOQ9UBS9 1254 aaKnown RBP10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 PRDM4Q9UKN5 801 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 PCDHGA10Q9Y5H3 936 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 DOCK10Q96BY6 2186 aa10.25□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ACOT8O14734 319 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ZNF354AO60765 605 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 NME6O75414 186 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ITGA10O75578 1167 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 DNAJB5O75953 348 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 PGM3O95394 542 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 IGKV1D-16P01601 117 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 RPS4Y1P22090 263 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 PGM1P36871 562 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ADH7P40394 386 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 CRISP3P54108 245 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ZNF155Q12901 538 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 BNIP2Q12982 314 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 TESK1Q15569 626 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 NTRK2Q16620 822 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 DECR1Q16698 335 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ACER2Q5QJU3 275 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 DCST2Q5T1A1 773 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 INTS11Q5TA45 600 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 OPN5Q6U736 354 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ANGPTL8Q6UXH0 198 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 SPNS3Q6ZMD2 512 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 NUP54Q7Z3B4 507 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 SZRD1Q7Z422 152 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 BCORP1Q8N888 145 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 COX18Q8N8Q8 333 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 HIPK4Q8NE63 616 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 OR4N2Q8NGD1 307 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 SLC22A8Q8TCC7 542 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 BRIX1Q8TDN6 353 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 APOBEC4Q8WW27 367 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 PIK3R3Q92569 461 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 HAS2Q92819 552 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 UTP4Q969X6 686 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 MARVELD3Q96A59 401 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ASB9Q96DX5 294 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 SMAD5Q99717 465 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 TREX2Q9BQ50 279 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 HOXD1Q9GZZ0 328 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 CDCP1Q9H5V8 836 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 STMN3Q9NZ72 180 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ACTR3BQ9P1U1 418 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 TEKT2Q9UIF3 430 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 PCDHGB7Q9Y5F8 929 aa10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 PCDHGA9Q9Y5G4 932 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-204ENST00000577664 A0A1W2PQD3 144 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 GXYLT2A0PJZ3 443 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ANKRD33BA6NCL7 494 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 TMEM247A6NEH6 219 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ARGFXA6NJG6 315 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 MASP2O00187 686 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 FCMRO60667 390 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 PPM1BO75688 479 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 OR2J2O76002 312 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 CHRM4P08173 479 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 NR2F1P10589 423 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 PRKAR1AP10644 381 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 GGT1P19440 569 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 TBXA2RP21731 343 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 KDELR2P33947 212 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 TMED10P49755 219 aaKnown RBP10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 CASP9P55211 416 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 SCARB2Q14108 478 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 EFR3AQ14156 821 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ZNF141Q15928 474 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 SYPL1Q16563 259 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 CYP51A1Q16850 503 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 TYW3Q6IPR3 259 aaKnown RBP10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 IGFL3Q6UXB1 125 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 FRRS1Q6ZNA5 592 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 WDR53Q7Z5U6 358 aaPredicted RBP10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 PATL1Q86TB9 770 aaKnown RBP10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ULK2Q8IYT8 1036 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 ANKFN1Q8N957 763 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 BBS10Q8TAM1 723 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 HGDQ93099 445 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 MAL2Q969L2 176 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 OMA1Q96E52 524 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 TMEM19Q96HH6 336 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 SGCZQ96LD1 299 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 KCTD14Q9BQ13 255 aaPredicted RBP10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 RUBCNLQ9H714 662 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 SLC7A8Q9UHI5 535 aa10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 GPC6Q9Y625 555 aaPredicted RBP10.23□□□□□ -0.77
CDK5RAP3-204ENST00000577664 CFAP73A6NFT4 308 aa10.22□□□□□ -0.77
CDK5RAP3-204ENST00000577664 AGAP5A6NIR3 686 aa10.22□□□□□ -0.77
CDK5RAP3-204ENST00000577664 TMEM229AB2RXF0 380 aa10.22□□□□□ -0.77
CDK5RAP3-204ENST00000577664 WWP2O00308 870 aa10.22□□□□□ -0.77
CDK5RAP3-204ENST00000577664 KIAA0513O60268 411 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms