RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 BNIP1Q12981 228 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 HSPB3Q12988 150 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 TRAF3Q13114 568 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 SMN1Q16637 294 aaKnown RBP6.6□□□□□ -1.35
CNOT1-222ENST00000570139 UGT3A2Q3SY77 523 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 PAGE2BQ5JRK9 111 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 ENPP7Q6UWV6 458 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 ABRAXAS1Q6UWZ7 409 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 Q6ZSR6 202 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 SYVN1Q86TM6 617 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 PARGQ86W56 976 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 CPSF7Q8N684 471 aaKnown RBP6.6□□□□□ -1.35
CNOT1-222ENST00000570139 SNX31Q8N9S9 440 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 L3MBTL4Q8NA19 623 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 HMGCLL1Q8TB92 370 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 WDR34Q96EX3 536 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 THOC1Q96FV9 657 aaKnown RBP6.6□□□□□ -1.35
CNOT1-222ENST00000570139 BMFQ96LC9 184 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 MS4A10Q96PG2 267 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 DDOQ99489 341 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 EFHD1Q9BUP0 239 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 ABHD6Q9BV23 337 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 ACTR8Q9H981 624 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 FGF22Q9HCT0 170 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 FZD3Q9NPG1 666 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 PRMT8Q9NR22 394 aaPredicted RBP6.6□□□□□ -1.35
CNOT1-222ENST00000570139 NDE1Q9NXR1 346 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 MUTYHQ9UIF7 546 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 TSC22D4Q9Y3Q8 395 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 PCDHGA5Q9Y5G8 931 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 DNAJC15Q9Y5T4 150 aa6.6□□□□□ -1.35
CNOT1-222ENST00000570139 ZFC3H1O60293 1989 aaKnown RBP6.6□□□□□ -1.35
CNOT1-222ENST00000570139 EYSQ5T1H1 3165 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 MYO10Q9HD67 2058 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 A0A0B4J293 547 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 KIR2DS5A0A0G2JLQ3 304 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 A0A0G2JNG1 304 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 CFAP73A6NFT4 308 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 CGB1A6NKQ9 187 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 DBX1A6NMT0 343 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 PDZK1P1A8MUH7 402 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 NPIPB8E9PQR5 432 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 H0YIV9 168 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 KIR2DS3K7RE56 304 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 UBDO15205 165 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 SLC16A8O95907 504 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 CAPN1P07384 714 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 F3P13726 295 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 IDO1P14902 403 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 LBPP18428 481 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 CD38P28907 300 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 PDHA2P29803 388 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 TNFSF8P32971 234 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 SHMT2P34897 504 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 CASP3P42574 277 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 BDKRB1P46663 353 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 ACADVLP49748 655 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 ERVPABLB-1P60509 514 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 TBPL1P62380 186 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 SIM1P81133 766 aaPredicted RBP6.59□□□□□ -1.35
CNOT1-222ENST00000570139 C17orf67Q0P5P2 114 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 FOXI1Q12951 378 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 CBX3Q13185 183 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 SQLEQ14534 574 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 KIR2DS5Q14953 304 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 HERC3Q15034 1050 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 LSM12Q3MHD2 195 aaKnown RBP6.59□□□□□ -1.35
CNOT1-222ENST00000570139 XKR7Q5GH72 579 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 SUMO4Q6EEV6 95 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 HIST2H2AA3Q6FI13 130 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 ZNF813Q6ZN06 617 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 FAM57BQ71RH2 274 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 NUP54Q7Z3B4 507 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 RABEPKQ7Z6M1 372 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 CCDC190Q86UF4 302 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 THOC6Q86W42 341 aaKnown RBP6.59□□□□□ -1.35
CNOT1-222ENST00000570139 ARHGAP24Q8N264 748 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 GALNT16Q8N428 558 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 OR4F6Q8NGB9 312 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 OR52B6Q8NGF0 335 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 OR1J2Q8NGS2 313 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 C9orf43Q8TAL5 461 aaPredicted RBP6.59□□□□□ -1.35
CNOT1-222ENST00000570139 AGR3Q8TD06 166 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 NAT14Q8WUY8 206 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 OR1E3Q8WZA6 343 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 SMPDL3AQ92484 453 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 TMEM18Q96B42 140 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 MED8Q96G25 268 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 PPP3R2Q96LZ3 170 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 C12orf66Q96MD2 445 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 PKP4Q99569 1192 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 EBF4Q9BQW3 602 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 INPP5KQ9BT40 448 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 NMUR2Q9GZQ4 415 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 ELOVL6Q9H5J4 265 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 KIR3DX1Q9H7L2 352 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 PELI2Q9HAT8 420 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 MKKSQ9NPJ1 570 aaPredicted RBP6.59□□□□□ -1.35
CNOT1-222ENST00000570139 POT1Q9NUX5 634 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 NMRK1Q9NWW6 199 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms