RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 ERRFI1Q9UJM3 462 aaPredicted RBP6.24□□□□□ -1.41
SMG1-217ENST00000569764 CDYLQ9Y232 598 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 SPTA1P02549 2419 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 TRBV2A0A0J9YWF9 115 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 CDC14CA4D256 554 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 LIPT2A6NK58 231 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 ENTPD5O75356 428 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 RSL1D1O76021 490 aaKnown RBP6.24□□□□□ -1.41
SMG1-217ENST00000569764 MT-ND2P03891 347 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 UGT2B10P36537 528 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 ADPRHP54922 357 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 FBXW4P57775 412 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 CRADDP78560 199 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 PLGLB1Q02325 96 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 PDIA2Q13087 525 aaKnown RBP6.24□□□□□ -1.41
SMG1-217ENST00000569764 TARDBPQ13148 414 aaKnown RBP eCLIP6.24□□□□□ -1.41
SMG1-217ENST00000569764 IRF4Q15306 451 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 TMEM52BQ4KMG9 183 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 CGB2Q6NT52 195 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 SUMF1Q8NBK3 374 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 OR7G3Q8NG95 312 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 OR6Q1Q8NGQ2 317 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 AP3S1Q92572 193 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 STMN2Q93045 179 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 TCEAL3Q969E4 200 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 NXNL1Q96CM4 212 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 KLHL29Q96CT2 875 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 POLDIP3Q9BY77 421 aaKnown RBP6.24□□□□□ -1.41
SMG1-217ENST00000569764 SLC25A51Q9H1U9 297 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 C6orf106Q9H6K1 298 aaPredicted RBP6.24□□□□□ -1.41
SMG1-217ENST00000569764 ZNF282Q9UDV7 671 aaPredicted RBP6.24□□□□□ -1.41
SMG1-217ENST00000569764 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.24□□□□□ -1.41
SMG1-217ENST00000569764 KPTNQ9Y664 436 aa6.24□□□□□ -1.41
SMG1-217ENST00000569764 SMIM31A0A1B0GVY4 71 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 LNP1A1A4G5 178 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 FAM92AA1XBS5 289 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 C21orf140B9A014 251 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 ADAM23O75077 832 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 ALX3O95076 343 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 F12P00748 615 aaPredicted RBP6.23□□□□□ -1.41
SMG1-217ENST00000569764 EPOP01588 193 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 SLC35G6P0C7Q6 338 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 EBLN1P0CF75 366 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 BMP4P12644 408 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 IFNGR1P15260 489 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 NQO1P15559 274 aaKnown RBP6.23□□□□□ -1.41
SMG1-217ENST00000569764 ADH6P28332 368 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 HK3P52790 923 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 PRKAG1P54619 331 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 NRG3P56975 720 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 EIF4EBP2Q13542 120 aaPredicted RBP6.23□□□□□ -1.41
SMG1-217ENST00000569764 AP5B1Q2VPB7 878 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 ARMCX4Q5H9R4 360 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 LIPJQ5W064 366 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 UQCC3Q6UW78 93 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 DUSP19Q8WTR2 217 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 PRMT1Q99873 361 aaKnown RBP6.23□□□□□ -1.41
SMG1-217ENST00000569764 NMUR1Q9HB89 426 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 IFT46Q9NQC8 304 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 CATSPERZQ9NTU4 200 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 PLCXD1Q9NUJ7 323 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 UTS2RQ9UKP6 389 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 FCF1Q9Y324 198 aaKnown RBP6.23□□□□□ -1.41
SMG1-217ENST00000569764 MN1Q10571 1320 aaPredicted RBP6.23□□□□□ -1.41
SMG1-217ENST00000569764 BRWD1Q9NSI6 2320 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 VSTM2BA6NLU5 285 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 SLC31A2O15432 143 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 SPINT1O43278 529 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 MT-ND5P03915 603 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 HOXC4P09017 264 aaPredicted RBP6.23□□□□□ -1.41
SMG1-217ENST00000569764 ACP5P13686 325 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 PTDSS1P48651 473 aaKnown RBP6.23□□□□□ -1.41
SMG1-217ENST00000569764 WDR4P57081 412 aaKnown RBP6.23□□□□□ -1.41
SMG1-217ENST00000569764 PTPRSQ13332 1948 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 C1orf61Q13536 156 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 LTB4RQ15722 352 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 GON4LQ3T8J9 2241 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 COQ5Q5HYK3 327 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 C19orf48Q6RUI8 117 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 ZBTB49Q6ZSB9 765 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 GPR180Q86V85 440 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 UMODL1-AS1Q8N2C9 162 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 ZNF561Q8N587 486 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 THOC3Q96J01 351 aaKnown RBP6.23□□□□□ -1.41
SMG1-217ENST00000569764 NUDT9Q9BW91 350 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 DNTTIP1Q9H147 329 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 COPS7AQ9UBW8 275 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 NUP50Q9UKX7 468 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 U3KQV3 271 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 PLXNA3P51805 1871 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 HMX2A2RU54 273 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 E7ESA3 106 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 PLRG1O43660 514 aaKnown RBP6.23□□□□□ -1.41
SMG1-217ENST00000569764 NPHS1O60500 1241 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 LRIG2O94898 1065 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 WDR47O94967 919 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 ITGB2P05107 769 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 ABOP16442 354 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 ZNF12P17014 697 aa6.23□□□□□ -1.41
SMG1-217ENST00000569764 F8A1P23610 371 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms