RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 SMCO1Q147U7 214 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 LGALSLQ3ZCW2 172 aaPredicted RBP10.25□□□□□ -0.77
PALB2-206ENST00000568219 MPPE1Q53F39 396 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 POMZP3Q6PJE2 187 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 GLRX5Q86SX6 157 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 ZNF480Q8WV37 535 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 ZMYND19Q96E35 227 aaPredicted RBP10.25□□□□□ -0.77
PALB2-206ENST00000568219 RADILQ96JH8 1075 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 CAMK1GQ96NX5 476 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 ABHD1Q96SE0 405 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 C12orf57Q99622 126 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 XKR8Q9H6D3 395 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 MRPL17Q9NRX2 175 aaKnown RBP10.25□□□□□ -0.77
PALB2-206ENST00000568219 MYEF2Q9P2K5 600 aaKnown RBP10.25□□□□□ -0.77
PALB2-206ENST00000568219 PRKAG2Q9UGJ0 569 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 MBD1Q9UIS9 605 aaPredicted RBP10.25□□□□□ -0.77
PALB2-206ENST00000568219 MRTO4Q9UKD2 239 aaKnown RBP10.25□□□□□ -0.77
PALB2-206ENST00000568219 NTNG1Q9Y2I2 539 aa10.25□□□□□ -0.77
PALB2-206ENST00000568219 NOP16Q9Y3C1 178 aaKnown RBP10.25□□□□□ -0.77
PALB2-206ENST00000568219 ZNF879B4DU55 563 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 ADAM12O43184 909 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 PRAMEF4O60810 478 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 SDC3O75056 442 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 OAZ2O95190 189 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 HMGN2P05204 90 aaKnown RBP10.24□□□□□ -0.77
PALB2-206ENST00000568219 FURINP09958 794 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 CR2P20023 1033 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 KHKP50053 298 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 PRR5P85299 388 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 ST3GAL2Q16842 350 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 PRAMEF9Q5VWM5 478 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 FAM46CQ5VWP2 391 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 CD276Q5ZPR3 534 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 PRICKLE2Q7Z3G6 844 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 NUDT13Q86X67 352 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 VRK2Q86Y07 508 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 LIX1LQ8IVB5 337 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 TBC1D19Q8N5T2 526 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 OR5M3Q8NGP4 307 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 ADAMTS14Q8WXS8 1223 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 LRRC46Q96FV0 321 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 ZC3H10Q96K80 434 aaKnown RBP10.24□□□□□ -0.77
PALB2-206ENST00000568219 FCRL1Q96LA6 429 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 TRPV4Q9HBA0 871 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 ACTR10Q9NZ32 417 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 STRCQ7RTU9 1775 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 KRBOX1C9JBD0 128 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 RNF13O43567 381 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 MTRF1O75570 445 aaKnown RBP10.24□□□□□ -0.77
PALB2-206ENST00000568219 B3GALNT1O75752 331 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 SOX30O94993 753 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 ADRA2AP08913 450 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 PSMB1P20618 241 aaKnown RBP10.24□□□□□ -0.77
PALB2-206ENST00000568219 CAPZA2P47755 286 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 SORDQ00796 357 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 METTL11BQ5VVY1 283 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 MLIPQ5VWP3 458 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 GDPD4Q6W3E5 623 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 QSOX2Q6ZRP7 698 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 KCTD9Q7L273 389 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 ZNF627Q7L945 461 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 CPA6Q8N4T0 437 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 TIFAQ96CG3 184 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 MICU1Q9BPX6 476 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 SEMA4CQ9C0C4 833 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 C5orf51A6NDU8 294 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 H7C0S8 307 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 DVL2O14641 736 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 AGPAT2O15120 278 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 SHOXO15266 292 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 KRT33AO76009 404 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 UBXN7O94888 489 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 SOD1P00441 154 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 PIPP12273 146 aaPredicted RBP10.24□□□□□ -0.77
PALB2-206ENST00000568219 GTF2F2P13984 249 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 GLULP15104 373 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 HSD3B2P26439 372 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 SLC11A1P49279 550 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 SLC25A35Q3KQZ1 300 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 ZNF628Q5EBL2 1059 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 ZDHHC20Q5W0Z9 365 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 HBMQ6B0K9 141 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 LAMTOR1Q6IAA8 161 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 OR5M10Q6IEU7 315 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 FCRLAQ7L513 359 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 OR10K1Q8NGX5 313 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 CNOT9Q92600 299 aaKnown RBP10.24□□□□□ -0.77
PALB2-206ENST00000568219 GHSRQ92847 366 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 C16orf58Q96GQ5 468 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 CXorf58Q96LI9 332 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 AUNIPQ9H7T9 357 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 ASF1BQ9NVP2 202 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 CACNA1IQ9P0X4 2223 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 F8W036 122 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 QSOX1O00391 747 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 SGCEO43556 437 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 IFNGP01579 166 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 MAS1P04201 325 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 GKN3PP0CG01 181 aa10.24□□□□□ -0.77
PALB2-206ENST00000568219 RD3LP0DJH9 198 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms