RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 PRR5P85299 388 aa12.32□□□□□ -0.44
CLK3-218ENST00000566926 CMPK2Q5EBM0 449 aa12.32□□□□□ -0.44
CLK3-218ENST00000566926 MTX3Q5HYI7 312 aa12.32□□□□□ -0.44
CLK3-218ENST00000566926 RABL3Q5HYI8 236 aa12.32□□□□□ -0.44
CLK3-218ENST00000566926 MSRB3Q8IXL7 192 aa12.32□□□□□ -0.44
CLK3-218ENST00000566926 OR2T12Q8NG77 320 aa12.32□□□□□ -0.44
CLK3-218ENST00000566926 OR5M3Q8NGP4 307 aa12.32□□□□□ -0.44
CLK3-218ENST00000566926 NUDT8Q8WV74 236 aa12.32□□□□□ -0.44
CLK3-218ENST00000566926 STMN2Q93045 179 aa12.32□□□□□ -0.44
CLK3-218ENST00000566926 REXO5Q96IC2 774 aaKnown RBP12.32□□□□□ -0.44
CLK3-218ENST00000566926 DOHHQ9BU89 302 aa12.32□□□□□ -0.44
CLK3-218ENST00000566926 DENND2DQ9H6A0 471 aaPredicted RBP12.32□□□□□ -0.44
CLK3-218ENST00000566926 ZDHHC11Q9H8X9 412 aa12.32□□□□□ -0.44
CLK3-218ENST00000566926 ZFP64Q9NPA5 681 aa12.32□□□□□ -0.44
CLK3-218ENST00000566926 QPCTLQ9NXS2 382 aa12.32□□□□□ -0.44
CLK3-218ENST00000566926 B4GALT7Q9UBV7 327 aa12.32□□□□□ -0.44
CLK3-218ENST00000566926 MAGEL2Q9UJ55 1249 aa12.32□□□□□ -0.44
CLK3-218ENST00000566926 CNOT11Q9UKZ1 510 aaKnown RBP12.32□□□□□ -0.44
CLK3-218ENST00000566926 COL12A1Q99715 3063 aa12.32□□□□□ -0.44
CLK3-218ENST00000566926 NCOA6Q14686 2063 aaPredicted RBP12.31□□□□□ -0.44
CLK3-218ENST00000566926 PINLYPA6NC86 204 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 TTC36A6NLP5 189 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 FAM166BA8MTA8 275 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 FAM220BPB1ANY3 271 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 PLOD2O00469 737 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 MGRN1O60291 552 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 GLSO94925 669 aaPredicted RBP12.31□□□□□ -0.44
CLK3-218ENST00000566926 GP1BBP13224 206 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 PTGER1P34995 402 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 GPC1P35052 558 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 SOX18P35713 384 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 CHI3L1P36222 383 aaPredicted RBP12.31□□□□□ -0.44
CLK3-218ENST00000566926 PIGAP37287 484 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 CDKN2CP42773 168 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 GSK3BP49841 420 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 FBXW4P57775 412 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 MTPNP58546 118 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 MRPS22P82650 360 aaKnown RBP12.31□□□□□ -0.44
CLK3-218ENST00000566926 PLCXD2Q0VAA5 305 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 FOXO1Q12778 655 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 DUSP8Q13202 625 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 SLC10A1Q14973 349 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 SPDYE7PQ495Y7 208 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 PRAMEF20Q5VT98 475 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 PACS2Q86VP3 889 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 DHFR2Q86XF0 187 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 SLC30A8Q8IWU4 369 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 SLC34A3Q8N130 599 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 OR56A1Q8NGH5 318 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 OR52N2Q8NGI0 321 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 SPPL2AQ8TCT8 520 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 ZFP90Q8TF47 636 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 OMA1Q96E52 524 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 NEURL3Q96EH8 262 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 FAM120BQ96EK7 910 aaKnown RBP12.31□□□□□ -0.44
CLK3-218ENST00000566926 ZNF597Q96LX8 424 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 LRGUKQ96M69 825 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 BTBD9Q96Q07 612 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 SLC35A5Q9BS91 424 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 DEFB127Q9H1M4 99 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 GLIPR2Q9H4G4 154 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 C3orf14Q9HBI5 128 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 PLSCR2Q9NRY7 297 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 DDX18Q9NVP1 670 aaKnown RBP12.31□□□□□ -0.44
CLK3-218ENST00000566926 TUBA8Q9NY65 449 aaPredicted RBP12.31□□□□□ -0.44
CLK3-218ENST00000566926 ACTR3BQ9P1U1 418 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 DTX4Q9Y2E6 619 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 GPR55Q9Y2T6 319 aaPredicted RBP12.31□□□□□ -0.44
CLK3-218ENST00000566926 SNX13Q9Y5W8 968 aa12.31□□□□□ -0.44
CLK3-218ENST00000566926 A0A0G2JMM0 328 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 RNF103-CHMP3A0A140T963 221 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 A0A1B0GTH9 108 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 A0A1W2PPB8 328 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 A0A1W2PRS3 328 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 AQP12BA6NM10 295 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 KIR3DP1A8MWS1 328 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 ACOT8O14734 319 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 FKBP6O75344 327 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 WISP2O76076 250 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 SOX30O94993 753 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 GSNP06396 782 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 SOAT1P35610 550 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 RBBP4Q09028 425 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 HSPB3Q12988 150 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 SNTA1Q13424 505 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 GAB1Q13480 694 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 EFR3AQ14156 821 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 KPNB1Q14974 876 aaKnown RBP12.3□□□□□ -0.44
CLK3-218ENST00000566926 ZNHIT3Q15649 155 aaPredicted RBP12.3□□□□□ -0.44
CLK3-218ENST00000566926 NNATQ16517 81 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 C3AR1Q16581 482 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 CYP51A1Q16850 503 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 LCN8Q6JVE9 175 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 ZFP1Q6P2D0 407 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 TMEM81Q6P7N7 255 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 AAGABQ6PD74 315 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 TMEM107Q6UX40 140 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 RPTNQ6XPR3 784 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 CALHM3Q86XJ0 350 aa12.3□□□□□ -0.44
CLK3-218ENST00000566926 AQP12AQ8IXF9 295 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms