RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 NPIPA7E9PJI5 369 aa18.1■□□□□ 0.49
CLN6-205ENST00000564846 CPNE3O75131 537 aaKnown RBP18.1■□□□□ 0.49
CLN6-205ENST00000564846 CYP7B1O75881 506 aa18.1■□□□□ 0.49
CLN6-205ENST00000564846 OR5F1O95221 314 aa18.1■□□□□ 0.49
CLN6-205ENST00000564846 NPIPA8P0DM63 369 aa18.1■□□□□ 0.49
CLN6-205ENST00000564846 MC2RQ01718 297 aa18.1■□□□□ 0.49
CLN6-205ENST00000564846 CD47Q08722 323 aa18.1■□□□□ 0.49
CLN6-205ENST00000564846 ZNF141Q15928 474 aa18.1■□□□□ 0.49
CLN6-205ENST00000564846 ENTPD8Q5MY95 495 aa18.1■□□□□ 0.49
CLN6-205ENST00000564846 RBM48Q5RL73 367 aaKnown RBP18.1■□□□□ 0.49
CLN6-205ENST00000564846 BCORP1Q8N888 145 aa18.1■□□□□ 0.49
CLN6-205ENST00000564846 ZNF321PQ8N8H1 164 aa18.1■□□□□ 0.49
CLN6-205ENST00000564846 MORN4Q8NDC4 146 aa18.1■□□□□ 0.49
CLN6-205ENST00000564846 TOR1AIP2Q8NFQ8 470 aa18.1■□□□□ 0.49
CLN6-205ENST00000564846 FBLIM1Q8WUP2 373 aa18.1■□□□□ 0.49
CLN6-205ENST00000564846 HDAC2Q92769 488 aaKnown RBP18.1■□□□□ 0.49
CLN6-205ENST00000564846 SLC38A4Q969I6 547 aa18.1■□□□□ 0.49
CLN6-205ENST00000564846 GTPBP3Q969Y2 492 aaKnown RBP18.1■□□□□ 0.49
CLN6-205ENST00000564846 FBXO8Q9NRD0 319 aa18.1■□□□□ 0.49
CLN6-205ENST00000564846 RXFP3Q9NSD7 469 aa18.1■□□□□ 0.49
CLN6-205ENST00000564846 COPS7AQ9UBW8 275 aa18.1■□□□□ 0.49
CLN6-205ENST00000564846 CPSF4LA6NMK7 179 aaKnown RBP18.09■□□□□ 0.49
CLN6-205ENST00000564846 CDX4O14627 284 aaPredicted RBP18.09■□□□□ 0.49
CLN6-205ENST00000564846 POU2F1P14859 743 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 DRD5P21918 477 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 ELK4P28324 431 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 EPHA2P29317 976 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 ZNF136P52737 540 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 UGT2B15P54855 530 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 DCAF7P61962 342 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 TUBA4AP68366 448 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 IL5RAQ01344 420 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 NNATQ16517 81 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 PGBD2Q6P3X8 592 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 PLEKHM3Q6ZWE6 761 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 ZSCAN1Q8NBB4 408 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 ADAMTS16Q8TE57 1224 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 RNF31Q96EP0 1072 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 CTRCQ99895 268 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 DGCR6LQ9BY27 220 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 CTPS2Q9NRF8 586 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 TUBA8Q9NY65 449 aaPredicted RBP18.09■□□□□ 0.49
CLN6-205ENST00000564846 SEC16AO15027 2179 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 VPS13AQ96RL7 3174 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 NINQ8N4C6 2090 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 VSTM2BA6NLU5 285 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 IDSB3KWA1 339 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 NPIPB9F8W1W9 429 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 FMO6PO60774 539 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 HEXBP07686 556 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 CD59P13987 128 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 ATP6V1B1P15313 513 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 AGXTP21549 392 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 CCKBRP32239 447 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 ATP12AP54707 1039 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 ESRRGP62508 458 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 DECR1Q16698 335 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 PDZK1Q5T2W1 519 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 RBM44Q6ZP01 1051 aaKnown RBP18.09■□□□□ 0.49
CLN6-205ENST00000564846 SHISA6Q6ZSJ9 500 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 GRAMD2AQ8IUY3 354 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 OR4K5Q8NGD3 323 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 OR1N1Q8NGS0 311 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 OIT3Q8WWZ8 545 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 NUDT9Q9BW91 350 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 PRR14Q9BWN1 585 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 UCK2Q9BZX2 261 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 SLC26A1Q9H2B4 701 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.09■□□□□ 0.49
CLN6-205ENST00000564846 SEMA4GQ9NTN9 838 aa18.09■□□□□ 0.49
CLN6-205ENST00000564846 MRTO4Q9UKD2 239 aaKnown RBP18.09■□□□□ 0.49
CLN6-205ENST00000564846 A0A087WXM4 84 aa18.08■□□□□ 0.48
CLN6-205ENST00000564846 FRG2CA6NGY1 282 aa18.08■□□□□ 0.48
CLN6-205ENST00000564846 OR6C76A6NM76 312 aa18.08■□□□□ 0.48
CLN6-205ENST00000564846 MEN1O00255 615 aa18.08■□□□□ 0.48
CLN6-205ENST00000564846 IFNGR2P38484 337 aa18.08■□□□□ 0.48
CLN6-205ENST00000564846 RPL5P46777 297 aaKnown RBP18.08■□□□□ 0.48
CLN6-205ENST00000564846 NUP107P57740 925 aa18.08■□□□□ 0.48
CLN6-205ENST00000564846 HOXC5Q00444 222 aa18.08■□□□□ 0.48
CLN6-205ENST00000564846 TOP3AQ13472 1001 aaPredicted RBP18.08■□□□□ 0.48
CLN6-205ENST00000564846 SF3A2Q15428 464 aaKnown RBP18.08■□□□□ 0.48
CLN6-205ENST00000564846 MEP1AQ16819 746 aa18.08■□□□□ 0.48
CLN6-205ENST00000564846 C6orf141Q5SZD1 244 aa18.08■□□□□ 0.48
CLN6-205ENST00000564846 KLHL17Q6TDP4 642 aa18.08■□□□□ 0.48
CLN6-205ENST00000564846 NAXDQ8IW45 347 aa18.08■□□□□ 0.48
CLN6-205ENST00000564846 SLC35B4Q969S0 331 aa18.08■□□□□ 0.48
CLN6-205ENST00000564846 SLC41A3Q96GZ6 507 aa18.08■□□□□ 0.48
CLN6-205ENST00000564846 LCORQ96JN0 433 aaPredicted RBP18.08■□□□□ 0.48
CLN6-205ENST00000564846 C11orf16Q9NQ32 467 aa18.08■□□□□ 0.48
CLN6-205ENST00000564846 AKAP7Q9P0M2 348 aaPredicted RBP18.08■□□□□ 0.48
CLN6-205ENST00000564846 TESQ9UGI8 421 aaKnown RBP18.08■□□□□ 0.48
CLN6-205ENST00000564846 FER1L5A0AVI2 2057 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 C2orf92A0A1B0GVN3 265 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 TFAP2AP05549 437 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 CYC1P08574 325 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 GGT2P36268 569 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 COX10Q12887 443 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 TARDBPQ13148 414 aaKnown RBP eCLIP18.07■□□□□ 0.48
CLN6-205ENST00000564846 CDK5R2Q13319 367 aa18.07■□□□□ 0.48
CLN6-205ENST00000564846 CTU2Q2VPK5 515 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms