RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 COPS7AQ9UBW8 275 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 KCNE5Q9UJ90 142 aa15.85■□□□□ 0.13
HDDC3-206ENST00000561036 MRTO4Q9UKD2 239 aaKnown RBP15.85■□□□□ 0.13
HDDC3-206ENST00000561036 A8MUA0 341 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 MEN1O00255 615 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 PEX12O00623 359 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 CYP7B1O75881 506 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 IGKV1D-16P01601 117 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 SMIM18P0DKX4 95 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 IFNGR2P38484 337 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 CLK3P49761 638 aaKnown RBP15.84■□□□□ 0.13
HDDC3-206ENST00000561036 ATP12AP54707 1039 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 ISL1P61371 349 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 ESRRGP62508 458 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 COX10Q12887 443 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 TOP3AQ13472 1001 aaPredicted RBP15.84■□□□□ 0.13
HDDC3-206ENST00000561036 APOFQ13790 326 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 SEC23BQ15437 767 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 RBM48Q5RL73 367 aaKnown RBP15.84■□□□□ 0.13
HDDC3-206ENST00000561036 PODNL1Q6PEZ8 512 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 CD300LDQ6UXZ3 194 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 ZSCAN1Q8NBB4 408 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 SUMF1Q8NBK3 374 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 C17orf47Q8NEP4 570 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 OR4N2Q8NGD1 307 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 OR9Q2Q8NGE9 314 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 SLC7A13Q8TCU3 470 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 HDAC2Q92769 488 aaKnown RBP15.84■□□□□ 0.13
HDDC3-206ENST00000561036 SLC38A4Q969I6 547 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 LCORQ96JN0 433 aaPredicted RBP15.84■□□□□ 0.13
HDDC3-206ENST00000561036 HRASLS5Q96KN8 279 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 NUDT9Q9BW91 350 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 STRADBQ9C0K7 418 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 WDR54Q9H977 334 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 TUBA8Q9NY65 449 aaPredicted RBP15.84■□□□□ 0.13
HDDC3-206ENST00000561036 NXT1Q9UKK6 140 aaKnown RBP15.84■□□□□ 0.13
HDDC3-206ENST00000561036 GMPPBQ9Y5P6 360 aa15.84■□□□□ 0.13
HDDC3-206ENST00000561036 CENPVL1A0A0U1RR11 272 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 IDSB3KWA1 339 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 TO15178 435 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 OR10H3O60404 316 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 TPST2O60704 377 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 CBFA2T3O75081 653 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 ALOX12BO75342 701 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 SEC24DO94855 1032 aaPredicted RBP15.83■□□□□ 0.12
HDDC3-206ENST00000561036 IL33O95760 270 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 GASTP01350 101 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 ATXN8OSP0DMR3 200 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 POLR2IP36954 125 aaKnown RBP15.83■□□□□ 0.12
HDDC3-206ENST00000561036 ZNF136P52737 540 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 UGT2B15P54855 530 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 NUP107P57740 925 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 TUBA4AP68366 448 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 SF3A2Q15428 464 aaKnown RBP15.83■□□□□ 0.12
HDDC3-206ENST00000561036 ENTPD8Q5MY95 495 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 HLA-DQA1Q5Y7H0 255 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 PLEKHM3Q6ZWE6 761 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 SLC29A4Q7RTT9 530 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 ANKRD37Q7Z713 158 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 ZAR1Q86SH2 424 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 PRSS58Q8IYP2 241 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 TSPAN14Q8NG11 270 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 METTL21AQ8WXB1 218 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 ADIPOR1Q96A54 375 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 CMKLR1Q99788 373 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 NIPSNAP1Q9BPW8 284 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 ZNF559Q9BR84 538 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 UCK2Q9BZX2 261 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 TESQ9UGI8 421 aaKnown RBP15.83■□□□□ 0.12
HDDC3-206ENST00000561036 PPIEQ9UNP9 301 aaKnown RBP15.83■□□□□ 0.12
HDDC3-206ENST00000561036 DNAH14Q0VDD8 3507 aa15.83■□□□□ 0.12
HDDC3-206ENST00000561036 C2orf92A0A1B0GVN3 265 aa15.82■□□□□ 0.12
HDDC3-206ENST00000561036 FRS3O43559 492 aa15.82■□□□□ 0.12
HDDC3-206ENST00000561036 LRP3O75074 770 aa15.82■□□□□ 0.12
HDDC3-206ENST00000561036 SMNDC1O75940 238 aaKnown RBP eCLIP15.82■□□□□ 0.12
HDDC3-206ENST00000561036 CLPTM1O96005 669 aa15.82■□□□□ 0.12
HDDC3-206ENST00000561036 KLK3P07288 261 aaPredicted RBP15.82■□□□□ 0.12
HDDC3-206ENST00000561036 FUT4P22083 530 aa15.82■□□□□ 0.12
HDDC3-206ENST00000561036 EMP2P54851 167 aa15.82■□□□□ 0.12
HDDC3-206ENST00000561036 RPP38P78345 283 aaKnown RBP15.82■□□□□ 0.12
HDDC3-206ENST00000561036 RAPSNQ13702 412 aa15.82■□□□□ 0.12
HDDC3-206ENST00000561036 FGFBP1Q14512 234 aa15.82■□□□□ 0.12
HDDC3-206ENST00000561036 EBPQ15125 230 aaKnown RBP15.82■□□□□ 0.12
HDDC3-206ENST00000561036 C6orf141Q5SZD1 244 aa15.82■□□□□ 0.12
HDDC3-206ENST00000561036 PDZK1Q5T2W1 519 aa15.82■□□□□ 0.12
HDDC3-206ENST00000561036 MRPL14Q6P1L8 145 aaKnown RBP15.82■□□□□ 0.12
HDDC3-206ENST00000561036 PGBD2Q6P3X8 592 aa15.82■□□□□ 0.12
HDDC3-206ENST00000561036 ZNF321PQ8N8H1 164 aa15.82■□□□□ 0.12
HDDC3-206ENST00000561036 OR4K5Q8NGD3 323 aa15.82■□□□□ 0.12
HDDC3-206ENST00000561036 HSPBAP1Q96EW2 488 aa15.82■□□□□ 0.12
HDDC3-206ENST00000561036 CTRCQ99895 268 aa15.82■□□□□ 0.12
HDDC3-206ENST00000561036 EDEM2Q9BV94 578 aa15.82■□□□□ 0.12
HDDC3-206ENST00000561036 SEMA4GQ9NTN9 838 aa15.82■□□□□ 0.12
HDDC3-206ENST00000561036 SLC39A1Q9NY26 324 aa15.82■□□□□ 0.12
HDDC3-206ENST00000561036 C19orf25Q9UFG5 118 aaPredicted RBP15.82■□□□□ 0.12
HDDC3-206ENST00000561036 A0A087WXM4 84 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 NPIPA5A0A0B4J1W7 369 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 FER1L5A0AVI2 2057 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 TRAPPC13A5PLN9 417 aa15.81■□□□□ 0.12
HDDC3-206ENST00000561036 DPPA5A6NC42 116 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms