RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 ZNF480Q8WV37 535 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 TRAV6A0A075B6T7 132 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 CD8B2A6NJW9 211 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 TSPAN4O14817 238 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 RRP8O43159 456 aaKnown RBP12.7□□□□□ -0.38
TRAF3-208ENST00000560371 EDN1P05305 212 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 CD8BP10966 210 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 IFNGR1P15260 489 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 OR1D4P47884 311 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 HTR6P50406 440 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 ERV3-1Q14264 604 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 PLEKHN1Q494U1 663 aaPredicted RBP12.7□□□□□ -0.38
TRAF3-208ENST00000560371 MANEAQ5SRI9 462 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 C6orf141Q5SZD1 244 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 OR5M10Q6IEU7 315 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 SYCE2Q6PIF2 218 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 ZNF765Q7L2R6 523 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 OR5D16Q8NGK9 328 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 ZC3H10Q96K80 434 aaKnown RBP12.7□□□□□ -0.38
TRAF3-208ENST00000560371 RTP3Q9BQQ7 232 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 MDC1Q14676 2089 aaKnown RBP12.7□□□□□ -0.38
TRAF3-208ENST00000560371 ARHGEF17Q96PE2 2063 aaPredicted RBP12.7□□□□□ -0.38
TRAF3-208ENST00000560371 H7C417 338 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 M0R036 132 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 SCGB2A1O75556 95 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 POU3F2P20265 443 aaPredicted RBP12.7□□□□□ -0.38
TRAF3-208ENST00000560371 LHCGRP22888 699 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 TPTEP56180 551 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 SIX1Q15475 284 aaPredicted RBP12.7□□□□□ -0.38
TRAF3-208ENST00000560371 ALKAL1Q6UXT8 129 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 MINDY2Q8NBR6 621 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 SLC37A3Q8NCC5 494 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 OR2A12Q8NGT7 310 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 AKAP1Q92667 903 aaKnown RBP eCLIP12.7□□□□□ -0.38
TRAF3-208ENST00000560371 LHX3Q9UBR4 397 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 RNASET2O00584 256 aaKnown RBP12.7□□□□□ -0.38
TRAF3-208ENST00000560371 RAC2P15153 192 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 CSNK2A1P68400 391 aaPredicted RBP12.7□□□□□ -0.38
TRAF3-208ENST00000560371 EEF1A2Q05639 463 aaKnown RBP12.7□□□□□ -0.38
TRAF3-208ENST00000560371 CDNFQ49AH0 187 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 IGFN1Q86VF2 1251 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 ASB12Q8WXK4 309 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 MGLLQ99685 303 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 POTEKPQ9BYX7 375 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 MEPEQ9NQ76 525 aaPredicted RBP12.7□□□□□ -0.38
TRAF3-208ENST00000560371 CA5BQ9Y2D0 317 aa12.7□□□□□ -0.38
TRAF3-208ENST00000560371 SPTBN1Q01082 2364 aaKnown RBP12.7□□□□□ -0.38
TRAF3-208ENST00000560371 MAS1P04201 325 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 OR7A5Q15622 319 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 C22orf42Q6IC83 251 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 OR9A4Q8NGU2 314 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 CUTCQ9NTM9 273 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 GPR52Q9Y2T5 361 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 TOGARAM1Q9Y4F4 1720 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 MYOFQ9NZM1 2061 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 HPRP00739 348 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 GNMTQ14749 295 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 C17orf113A0A1B0GUU1 675 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 M0R3H8 397 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 YKT6O15498 198 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 PPP1R3DO95685 299 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 TUBG1P23258 451 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 HTR3AP46098 478 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 MAB21L1Q13394 359 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 MOGSQ13724 837 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 RGNQ15493 299 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 NADSYN1Q6IA69 706 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 DEFB123Q8N688 67 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 OR51L1Q8NGJ5 315 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 SNIP1Q8TAD8 396 aaKnown RBP12.69□□□□□ -0.38
TRAF3-208ENST00000560371 ABCG2Q9UNQ0 655 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 CAMK2AQ9UQM7 478 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 PCDHA9Q9Y5H5 950 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 GPR39O43194 453 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 IGHEP01854 428 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 MAGEA8P43361 318 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 PRKXP51817 358 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 OR52R1Q8NGF1 315 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 GCDHQ92947 438 aaPredicted RBP12.69□□□□□ -0.38
TRAF3-208ENST00000560371 SAMD8Q96LT4 415 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 ZNF160Q9HCG1 818 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 SLC7A7Q9UM01 511 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 H3BSA7 217 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 SYT7O43581 403 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 IL20RBQ6UXL0 311 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 TMEM173Q86WV6 379 aaPredicted RBP12.69□□□□□ -0.38
TRAF3-208ENST00000560371 MFSD8Q8NHS3 518 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 NTMT1Q9BV86 223 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 HCAR1Q9BXC0 346 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 PINK1Q9BXM7 581 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 BEX2Q9BXY8 128 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 BEX1Q9HBH7 125 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 COPZ2Q9P299 210 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 BLACEA4D250 179 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 CDC14CA4D256 554 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 A6NIZ1 184 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 HMGN2P05204 90 aaKnown RBP12.69□□□□□ -0.38
TRAF3-208ENST00000560371 AHRP35869 848 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 RAP1BP61224 184 aa12.69□□□□□ -0.38
TRAF3-208ENST00000560371 RAP1AP62834 184 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms