RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 SLC18A1P54219 525 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 NME5P56597 212 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 RPS26P62854 115 aaKnown RBP10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 PRR5P85299 388 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 MAD2L1Q13257 205 aaPredicted RBP10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 TP53BP2Q13625 1128 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 SPDYE7PQ495Y7 208 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 VPS26BQ4G0F5 336 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 RIPPLY2Q5TAB7 128 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 MEX3BQ6ZN04 569 aaKnown RBP10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 CAMKMTQ7Z624 323 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 MED12LQ86YW9 2145 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 PM20D2Q8IYS1 436 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 COX18Q8N8Q8 333 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 GATSQ8NAP1 163 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 TEX37Q96LM6 180 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 SFXN2Q96NB2 322 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 TRIB1Q96RU8 372 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 PRPF18Q99633 342 aaKnown RBP10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 KLHDC3Q9BQ90 382 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 TUBA1CQ9BQE3 449 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 G6PC3Q9BUM1 346 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 ENKD1Q9H0I2 346 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 WDR55Q9H6Y2 383 aaPredicted RBP10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 KCNJ16Q9NPI9 418 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 THAP1Q9NVV9 213 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 GPATCH2Q9NW75 528 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 NKIRAS1Q9NYS0 192 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 MRTO4Q9UKD2 239 aaKnown RBP10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 SPG11Q96JI7 2443 aa10.56□□□□□ -0.72
RABGGTA-216ENST00000560243 CCDC168Q8NDH2 2452 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 NPIPA5A0A0B4J1W7 369 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 GOLGA8QA0A0J9YX86 632 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 GOLGA8OA6NCC3 632 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 SHISA8B8ZZ34 492 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 C9JVG2 144 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 NPIPA7E9PJI5 369 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 GOLGA8NF8WBI6 632 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 SCN2BO60939 215 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 OXSR1O95747 527 aaPredicted RBP10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 ANGPTL1O95841 491 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 C1QCP02747 245 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 NPIPA8P0DM63 369 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 IGFBP2P18065 325 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 LBPP18428 481 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 EPHA3P29320 983 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 CEACAM8P31997 349 aaPredicted RBP10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 SOAT1P35610 550 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 PRIM2P49643 509 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 LHX2P50458 406 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 PSMD4P55036 377 aaKnown RBP10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 DLX5P56178 289 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 DSCR4P56555 118 aaPredicted RBP10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 CLDN18P56856 261 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 OCRLQ01968 901 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 LSM12Q3MHD2 195 aaKnown RBP10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 NSUN5P2Q63ZY6 315 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 CDC73Q6P1J9 531 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 ZCCHC12Q6PEW1 402 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 POMZP3Q6PJE2 187 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 MAVSQ7Z434 540 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 ANKRD46Q86W74 232 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 LACC1Q8IV20 430 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 WDR75Q8IWA0 830 aaKnown RBP10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 C9orf106Q8NAJ2 232 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 RELL2Q8NC24 303 aaPredicted RBP10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 CHMP6Q96FZ7 201 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 SPOCK3Q9BQ16 436 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 TREX2Q9BQ50 279 aaPredicted RBP10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 BTBD2Q9BX70 525 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 ACTRT3Q9BYD9 372 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 TBL1XR1Q9BZK7 514 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 DPY30Q9C005 99 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 PIGUQ9H490 435 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 SERHL2Q9H4I8 314 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 MANSC1Q9H8J5 431 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 SDHAF3Q9NRP4 125 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 GIN1Q9NXP7 522 aa10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 MRPS18CQ9Y3D5 142 aaKnown RBP10.55□□□□□ -0.72
RABGGTA-216ENST00000560243 IGLV3-32A0A0A0MS00 114 aa10.54□□□□□ -0.72
RABGGTA-216ENST00000560243 CD8B2A6NJW9 211 aa10.54□□□□□ -0.72
RABGGTA-216ENST00000560243 ALG1L2C9J202 215 aa10.54□□□□□ -0.72
RABGGTA-216ENST00000560243 H0Y3Z8 333 aa10.54□□□□□ -0.72
RABGGTA-216ENST00000560243 H0YC42 278 aa10.54□□□□□ -0.72
RABGGTA-216ENST00000560243 HDAC3O15379 428 aa10.54□□□□□ -0.72
RABGGTA-216ENST00000560243 NGFRP08138 427 aa10.54□□□□□ -0.72
RABGGTA-216ENST00000560243 ZNF708P17019 499 aa10.54□□□□□ -0.72
RABGGTA-216ENST00000560243 HK1P19367 917 aa10.54□□□□□ -0.72
RABGGTA-216ENST00000560243 TBXA2RP21731 343 aa10.54□□□□□ -0.72
RABGGTA-216ENST00000560243 MSX1P28360 303 aa10.54□□□□□ -0.72
RABGGTA-216ENST00000560243 GCKP35557 465 aa10.54□□□□□ -0.72
RABGGTA-216ENST00000560243 AGFG1P52594 562 aaKnown RBP10.54□□□□□ -0.72
RABGGTA-216ENST00000560243 ZNF136P52737 540 aa10.54□□□□□ -0.72
RABGGTA-216ENST00000560243 CASP9P55211 416 aa10.54□□□□□ -0.72
RABGGTA-216ENST00000560243 TPD52P55327 224 aaPredicted RBP10.54□□□□□ -0.72
RABGGTA-216ENST00000560243 CLDN15P56746 228 aa10.54□□□□□ -0.72
RABGGTA-216ENST00000560243 UFM1P61960 85 aa10.54□□□□□ -0.72
RABGGTA-216ENST00000560243 POU6F2P78424 691 aaPredicted RBP10.54□□□□□ -0.72
RABGGTA-216ENST00000560243 SNTB1Q13884 538 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms