RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 CLCA1A8K7I4 914 aa16.54■□□□□ 0.24
SNX1-208ENST00000559844 CHST10O43529 356 aa16.54■□□□□ 0.24
SNX1-208ENST00000559844 CSO75390 466 aaKnown RBP16.54■□□□□ 0.24
SNX1-208ENST00000559844 INMTO95050 263 aa16.54■□□□□ 0.24
SNX1-208ENST00000559844 SLC35E2P0CK97 266 aa16.54■□□□□ 0.24
SNX1-208ENST00000559844 CCKBRP32239 447 aa16.54■□□□□ 0.24
SNX1-208ENST00000559844 IFNGR2P38484 337 aa16.54■□□□□ 0.24
SNX1-208ENST00000559844 GP2P55259 537 aaKnown RBP16.54■□□□□ 0.24
SNX1-208ENST00000559844 TAS2R41P59536 307 aa16.54■□□□□ 0.24
SNX1-208ENST00000559844 TARDBPQ13148 414 aaKnown RBP eCLIP16.54■□□□□ 0.24
SNX1-208ENST00000559844 LARS2Q15031 903 aaKnown RBP16.54■□□□□ 0.24
SNX1-208ENST00000559844 EIPR1Q53HC9 387 aa16.54■□□□□ 0.24
SNX1-208ENST00000559844 HMGN2P46Q86SG4 172 aa16.54■□□□□ 0.24
SNX1-208ENST00000559844 SLC38A4Q969I6 547 aa16.54■□□□□ 0.24
SNX1-208ENST00000559844 ANKRD9Q96BM1 317 aaPredicted RBP16.54■□□□□ 0.24
SNX1-208ENST00000559844 SIGLEC11Q96RL6 698 aa16.54■□□□□ 0.24
SNX1-208ENST00000559844 COPS4Q9BT78 406 aa16.54■□□□□ 0.24
SNX1-208ENST00000559844 POLR2J3Q9H1A7 115 aaKnown RBP16.54■□□□□ 0.24
SNX1-208ENST00000559844 PLCL2Q9UPR0 1127 aa16.54■□□□□ 0.24
SNX1-208ENST00000559844 MRPS33Q9Y291 106 aaKnown RBP16.54■□□□□ 0.24
SNX1-208ENST00000559844 ZNF443Q9Y2A4 671 aaPredicted RBP16.54■□□□□ 0.24
SNX1-208ENST00000559844 SCN3AQ9NY46 2000 aa16.54■□□□□ 0.24
SNX1-208ENST00000559844 DCHS1Q96JQ0 3298 aa16.54■□□□□ 0.24
SNX1-208ENST00000559844 SPTBN4Q9H254 2564 aa16.54■□□□□ 0.24
SNX1-208ENST00000559844 AP3D1O14617 1153 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 COQ9O75208 318 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 THBS1P07996 1170 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 CCNYL3P0C7X3 344 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 RNH1P13489 461 aaKnown RBP16.53■□□□□ 0.24
SNX1-208ENST00000559844 GSTM3P21266 225 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 POU1F1P28069 291 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 SOX18P35713 384 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 ST3GAL3Q11203 375 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 SYT6Q5T7P8 510 aaPredicted RBP16.53■□□□□ 0.24
SNX1-208ENST00000559844 GARNL3Q5VVW2 1013 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 TYW3Q6IPR3 259 aaKnown RBP16.53■□□□□ 0.24
SNX1-208ENST00000559844 WDR53Q7Z5U6 358 aaPredicted RBP16.53■□□□□ 0.24
SNX1-208ENST00000559844 ANKRD13BQ86YJ7 626 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 CCDC103Q8IW40 242 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 D2HGDHQ8N465 521 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 OR4K5Q8NGD3 323 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 PMM1Q92871 262 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 SDF2Q99470 211 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 CHRNA10Q9GZZ6 450 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 ACOT13Q9NPJ3 140 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 MAN2C1Q9NTJ4 1040 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 FKBP14Q9NWM8 211 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 FCMRO60667 390 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 CSTF2P33240 577 aaKnown RBP eCLIP16.53■□□□□ 0.24
SNX1-208ENST00000559844 MASP1P48740 699 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 DUSP8Q13202 625 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 FAM53BQ14153 422 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 TRAM2Q15035 370 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 SLX4IPQ5VYV7 408 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 C1orf94Q6P1W5 598 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 CCDC81Q6ZN84 652 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 PTCHD4Q6ZW05 846 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 ZNF619Q8N2I2 560 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 CTHRC1Q96CG8 243 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 ZNF285Q96NJ3 590 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 FUNDC2Q9BWH2 189 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 STRADBQ9C0K7 418 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 ZNF350Q9GZX5 532 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 CLN6Q9NWW5 311 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 NDOR1Q9UHB4 597 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 ENPP5Q9UJA9 477 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 MKLN1Q9UL63 735 aa16.53■□□□□ 0.24
SNX1-208ENST00000559844 OR10H2O60403 315 aa16.52■□□□□ 0.24
SNX1-208ENST00000559844 STX11O75558 287 aa16.52■□□□□ 0.24
SNX1-208ENST00000559844 ZIC2O95409 532 aaPredicted RBP16.52■□□□□ 0.24
SNX1-208ENST00000559844 FADS2O95864 444 aaKnown RBP16.52■□□□□ 0.24
SNX1-208ENST00000559844 MAP2K4P45985 399 aa16.52■□□□□ 0.24
SNX1-208ENST00000559844 ST13P50502 369 aaKnown RBP16.52■□□□□ 0.24
SNX1-208ENST00000559844 RGS8P57771 180 aaPredicted RBP16.52■□□□□ 0.24
SNX1-208ENST00000559844 MGAT2Q10469 447 aa16.52■□□□□ 0.24
SNX1-208ENST00000559844 TCTE1Q5JU00 501 aa16.52■□□□□ 0.24
SNX1-208ENST00000559844 DCST2Q5T1A1 773 aa16.52■□□□□ 0.24
SNX1-208ENST00000559844 COX18Q8N8Q8 333 aa16.52■□□□□ 0.24
SNX1-208ENST00000559844 MORN4Q8NDC4 146 aa16.52■□□□□ 0.24
SNX1-208ENST00000559844 AGBL5Q8NDL9 886 aa16.52■□□□□ 0.24
SNX1-208ENST00000559844 TRUB1Q8WWH5 349 aaKnown RBP16.52■□□□□ 0.24
SNX1-208ENST00000559844 ADAMTS14Q8WXS8 1223 aa16.52■□□□□ 0.24
SNX1-208ENST00000559844 GGHQ92820 318 aa16.52■□□□□ 0.24
SNX1-208ENST00000559844 ZG16BQ96DA0 208 aa16.52■□□□□ 0.24
SNX1-208ENST00000559844 RHNO1Q9BSD3 238 aa16.52■□□□□ 0.24
SNX1-208ENST00000559844 DCUN1D5Q9BTE7 237 aa16.52■□□□□ 0.24
SNX1-208ENST00000559844 CCDC88CQ9P219 2028 aa16.51■□□□□ 0.23
SNX1-208ENST00000559844 SPTBN2O15020 2390 aa16.51■□□□□ 0.23
SNX1-208ENST00000559844 A0A0A6YYC8 382 aaPredicted RBP16.51■□□□□ 0.23
SNX1-208ENST00000559844 H3BN98 237 aa16.51■□□□□ 0.23
SNX1-208ENST00000559844 TMX2-CTNND1H3BSU7 103 aa16.51■□□□□ 0.23
SNX1-208ENST00000559844 I3L1I5 382 aaPredicted RBP16.51■□□□□ 0.23
SNX1-208ENST00000559844 CYP7B1O75881 506 aa16.51■□□□□ 0.23
SNX1-208ENST00000559844 NSA2O95478 260 aaKnown RBP16.51■□□□□ 0.23
SNX1-208ENST00000559844 CDK1P06493 297 aa16.51■□□□□ 0.23
SNX1-208ENST00000559844 DBIP07108 87 aaKnown RBP16.51■□□□□ 0.23
SNX1-208ENST00000559844 FOLR1P15328 257 aa16.51■□□□□ 0.23
SNX1-208ENST00000559844 MAP4K2Q12851 820 aa16.51■□□□□ 0.23
SNX1-208ENST00000559844 TMEM236Q5W0B7 351 aa16.51■□□□□ 0.23
SNX1-208ENST00000559844 C12orf73Q69YU5 71 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms